DR406093

Overview
NameDR406093
Unique NameDR406093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13714 contig Csv1_Contig13714:427..1177. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 76/151 (50.33%), Postives = 91/151 (60.26%), Query Frame = 1
Query:  106 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEE--KND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 549
            R  NV DP+S+D W   D F +       S A       N R+DWKETP AHVF ADLPG+R          G +L+ISGER++E++   KND +WH VERSSGKF RRFRLP  A+V+QV ASM+NGVLTVT            AI ISG
Sbjct:    5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25
Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 1
Query:  100 GGRRTNVFDPVSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            GG      +PVS+D+ +PF D    +A   APS+A   +   + A +DWKET  AHVF AD+PG+R           ++L ISG+R++  EEK ++WHRVERSS +F+R  RLP NA  + V A+++NGVLT+T
Sbjct:   26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTIT 159          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24
Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 1
Query:  226 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            AR+DWKETP+ HV   D+PGL+           R+L +SGER KE+E+K D WHRVERS GKF R+FRLP N  ++ VKA +ENGVLT+T
Sbjct:   67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLT 156          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24
Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  220 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            ++AR+DWKETP+ HV   D+PGL+           R+L +SGER KE+++K D WHRVERS GKF R+F+LP N  ++ VKA MENGVLT+T
Sbjct:   73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLT 164          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.094e-22
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1
Query:  202 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 492
            R+TS   + AR+DWKET + H    D+PGL+            +L +SGER +E+E+K D+WHRVERS GKF R+F+LPDN  +E VKA +ENGVLT+
Sbjct:   62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 159          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.156e-22
Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 1
Query:  118 VFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            +FD ++ D W+PF  F ++   +A   A +TS FAN  I+ +ET +A+VF+ADLP G++          G +L+I+GERS  +EEK  + H +ERS   F  RF LPD+A V+ V+ASM+ G+LTVT
Sbjct:    6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVT 131          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21
Identity = 53/74 (71.62%), Postives = 58/74 (78.38%), Query Frame = 1
Query:  328 ILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 549
            IL ISGER+ E+E+KND WHRVERSSGKF+R FRLPDNAKV+QVKASMENGVLTVT            AIEISG
Sbjct:    1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18
Identity = 62/158 (39.24%), Postives = 87/158 (55.06%), Query Frame = 1
Query:   43 LSI*LASQFAIMSLIPSIFGG--RRTNVFDPVSLDVWDPFDGFLSSALTNAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQ--EEKN--DKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 492
            +++ LAS  A  +L+P   GG  R   V +   L   DPF       L + P      + +  + AR+DW+ET  AH    D+PG+R           R+L ISGER +E+  E+K   D WHR ERS G+F R+ RLPDNA ++ + AS++NGVLTV
Sbjct:   16 IAVVLASTAADGALLPWFGGGGARDEAVPELGLLAAADPF-----RILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTV 168          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18
Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 1
Query:  187 APSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXG-RILLISGER-----SKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            A ++A E +  A AR DWKETP+AHV   D+PG+R            R+L +SGER     ++E+E + D  +WHR ER++G+F RRFR+P  A V +V A +++GVLTVT
Sbjct:   59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVT 169          
BLAST of DR406093 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.530e-16
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  184 NAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILLISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495
            NAPS    R+    A    D KE P ++VF  D+PGL+            +LLISGER +E+E++  K+ R+ER  GKF+R+F LP+NA  + + A  ++GVLTVT
Sbjct:   30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVT 135          
The following BLAST results are available for this feature:
BLAST of DR406093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HS166_ORYSJ1.425e-3050.3316.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS189_ORYSJ1.380e-2544.7818.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP41_SOYBN1.526e-2456.6722.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP41_PEA1.526e-2454.3522.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HSP22_ARATH1.094e-2251.0222.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HS17B_ORYSJ4.156e-2244.0917.9 kDa heat shock protein 2 OS=Oryza sativa subs... [more]
HSP12_SOYBN1.209e-2171.62Class I heat shock protein (Fragment) OS=Glycine m... [more]
HS232_ORYSJ1.634e-1839.2423.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS219_ORYSJ6.210e-1845.0521.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP21_SOLPE1.530e-1642.4517.3 kDa class II heat shock protein OS=Solanum pe... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248L03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248L03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406093 ID=DR406093; Name=DR406093; organism=Citrus sinensis; type=EST; length=753bp
GGGGGATCTTCAAATTGATTGATCAAAGCATTTCCGAAGTTGTTGAGCAT
TTAATTAGCGTCCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTTCG
GTGGCCGAAGAACCAACGTGTTCGATCCAGTTTCATTAGATGTATGGGAT
CCTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCGGC
TAGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGACTC
CTCAGGCTCACGTATTCAAAGCTGATCTTCCAGGGCTGAGGAAAGAAGAA
GTAAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCTGATAAGCGGAGAGAG
GAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGCGTCGAGAGGA
GCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGTG
GAACAGGTTAAGGCCAGCATGGAGAATGGTGTGCTCACAGTCACCGTTCC
TAAACAGGAGGAGAAGAAACCTGAAGTTAAGGCTATTGAGATCTCTGGCT
AAGTGATAACTGTAGATGTTTTCAAGATAGTGTCTTTGGTTTGCTAATAA
ATTTGGTACGAAAGCAAAGCCCTTGTGTGTTTGTATGTNGTGTGTNGTGT
TCGTTTTCTTCCCTTCCCCCTGTTTAATTTNNNGTGANNNTGTTTGTGTG
TTTGCAAGAGCTTCAGGAGCCAGTCTCAAGCGTTGTAACTAGTTTTTTAA
TGA
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