DR405942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405942 vs. ExPASy Swiss-Prot
Match: RC23_ARATH (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 3 Query: 144 MADGSTVTCVDILLAVILPPLGVFLKFGC-KAEFWICLLLTILGYIPGIIYAVYAI 308 MA V C +IL+A++LPPLGV LK GC EF ICL+LTILGYIPGIIYA+Y I Sbjct: 1 MASNMEVFC-EILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVI 55
BLAST of DR405942 vs. ExPASy Swiss-Prot
Match: RC22_ARATH (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana GN=At2g24040 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.786e-12 Identity = 30/48 (62.50%), Postives = 40/48 (83.33%), Query Frame = 3 Query: 168 CVDILLAVILPPLGVFLKFGC-KAEFWICLLLTILGYIPGIIYAVYAI 308 C +I +A++LPP+GV L+ GC EF+ICL+LT LGY+PGIIYA+YAI Sbjct: 8 CCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAI 55
BLAST of DR405942 vs. ExPASy Swiss-Prot
Match: RC21_ARATH (UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana GN=At1g57550 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.786e-12 Identity = 25/47 (53.19%), Postives = 39/47 (82.98%), Query Frame = 3 Query: 171 VDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAIT 311 +++L A+ +PP+GVFL++G EFW+CLLLT+ +IPG+IYA+Y +T Sbjct: 5 LEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVLT 51
BLAST of DR405942 vs. ExPASy Swiss-Prot
Match: YCU4_CAEEL (UPF0057 membrane protein T23F2.4 OS=Caenorhabditis elegans GN=T23F2.4 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.499e-11 Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 3 Query: 162 VTCVDI---LLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAI 308 +TC+DI L A++LPP+GVFL+ GC IC+LLTILGYIPGIIYA Y I Sbjct: 3 ITCMDIPKFLFALLLPPVGVFLEKGCTHHLAICILLTILGYIPGIIYACYII 54
BLAST of DR405942 vs. ExPASy Swiss-Prot
Match: YCU3_CAEEL (UPF0057 membrane protein T23F2.3 OS=Caenorhabditis elegans GN=T23F2.3 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11 Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 3 Query: 162 VTCVDI---LLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAI 308 +TC DI + AV+LPP+GVFL+ GC IC+LLTILGYIPGIIYA Y I Sbjct: 3 LTCTDIPKFICAVLLPPIGVFLEKGCDYHLAICILLTILGYIPGIIYACYVI 54
BLAST of DR405942 vs. ExPASy Swiss-Prot
Match: PMP3_GIBZE (Plasma membrane proteolipid 3 OS=Gibberella zeae GN=PMP3 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.556e-11 Identity = 31/44 (70.45%), Postives = 40/44 (90.91%), Query Frame = 3 Query: 177 ILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAI 308 I+LA+ILPP+GVFL+ GC A+F+I +LLTILGYIPGII+A+Y I Sbjct: 21 IILAIILPPVGVFLERGCGADFFINILLTILGYIPGIIHALYII 64
BLAST of DR405942 vs. ExPASy Swiss-Prot
Match: PMP3_CRYNE (Plasma membrane proteolipid 3 OS=Cryptococcus neoformans GN=PMP3 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.361e-11 Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 3 Query: 165 TCVDI---LLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAI 308 TC DI +LA+ILPPLGVFL+ GC A+ I +LLTILGYIPGII+A+Y I Sbjct: 4 TCSDIFKIILAIILPPLGVFLERGCGADLLINILLTILGYIPGIIHALYII 54 The following BLAST results are available for this feature:
BLAST of DR405942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405942 ID=DR405942; Name=DR405942; organism=Citrus sinensis; type=EST; length=311bpback to top |