DR403993

Overview
NameDR403993
Unique NameDR403993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig557 contig Csv1_Contig557:308..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.279e-58
Identity = 110/196 (56.12%), Postives = 130/196 (66.33%), Query Frame = 2
Query:    5 YRNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPS--DYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQG 571
            +RND  CPA  FYTYDAF+ AA AFPGF  +G +    KRE+AAF AQT  ETTGGW  AP G YAWGYCF  E    +  DYC  +  +PC    KYYGRGPIQLS+N+NY               +PDL+A+D  +SF +A WFWMT Q PKPSCH V   +W PSA+D  AGR+PGYG+ TNIINGG+ECG G
Sbjct:   96 HRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHG 289          
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 3.720e-58
Identity = 106/189 (56.08%), Postives = 134/189 (70.90%), Query Frame = 2
Query:    5 YRNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQG 571
            +R D+ C    FYTYDAFI+AA  FP FG +GN+  R+RE+AAFF QT  ETTGGW  AP G +AWGYC ++E++P     DP       YYGRGPIQL+  YNY              NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++GRLPGYG+ TNIINGG ECG+G
Sbjct:   42 HRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPS----DP------PYYGRGPIQLTHKYNYQLAGDALGLDLV--NNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKG 217          
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.149e-57
Identity = 106/191 (55.50%), Postives = 129/191 (67.54%), Query Frame = 2
Query:    5 YRNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGN 577
            +RN++ CPAKGFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT  ET GG      G +  GYCF+ ++    D  D       +YYGRGPIQL+   NY R            NNPDL+ATDP++SF++AIWFWMTAQ  KPSCH VII +W PS  D  A R+PGYG+ TNIINGG+EC  G N
Sbjct:   42 FRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQI----DQSD-------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPN 217          
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 7.016e-57
Identity = 104/191 (54.45%), Postives = 125/191 (65.45%), Query Frame = 2
Query:    5 YRNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGN 577
            +RN++ CPAKGFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT  ET GG      G +  GYCF+ ++               +YYGRGPIQL+   NY R            NNPDL+ATDP++SFK+AIWFWMT Q  KPSCH VII +W PS  D  A R+PGYG+ TNIING  ECG G N
Sbjct:   42 FRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPN 217          
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.163e-57
Identity = 101/194 (52.06%), Postives = 129/194 (66.49%), Query Frame = 2
Query:    8 RNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDP----NYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGG 574
            RN++ CP KGFYTYDA+  A + +PGFG +G++  RKRE+AAFFAQT +ET+G         + WGYC ++E++P SDYCDP    +YPC   YYGRGP+QL WNYNY  C           + P+ +ATDPVLSF++A+WFWM       PSCHEVI  EW PS  D+ AGR PG+G+ TNII  G EC + G
Sbjct:   79 RNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGEC--GNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDG 270          
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.257e-55
Identity = 109/190 (57.37%), Postives = 128/190 (67.37%), Query Frame = 2
Query:    8 RNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGN 577
            RND+ CPAKGFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT  ETTGG   A G  +A GYCF+ E +               +YGRGPIQL+   NY              NNPDL+ATD  +SFK+AIWFWMTAQ  KPSCH+VI  +W PSA D +A R PGYG+ TNIINGGIECG+G N
Sbjct:   35 RNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQMGS----------GFYGRGPIQLTGQSNY--DLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQN 211          
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.617e-53
Identity = 108/191 (56.54%), Postives = 126/191 (65.97%), Query Frame = 2
Query:    8 RNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNA 580
            RND  C A  FYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT  ETTGG   +P G YA GYCF+ E +   +           YYGRGPIQL+   NY              NNPDL+ATD  +SFK+AIWFWMT Q  KPSCH+VI   W PSA D +A R+PGYG+ TNIINGGIECG+G NA
Sbjct:   42 RNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQMGN----------GYYGRGPIQLTGQSNY--DLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNA 219          
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.759e-53
Identity = 95/198 (47.98%), Postives = 129/198 (65.15%), Query Frame = 2
Query:    5 YRNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPSDYCD------PNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNA 580
            +++D  CPA+GFYTY +F+ AA  FP F  +G    RKRE+AAF AQ   ETTGGW  AP G YAWG C+  E++P S YCD      P YP +  Y+GRGPIQ+SWN+NY               NP+++A    ++F++A+WFWMT +  KPSCH+V++ E++P   DV A R  G+GL TNI+NGG+EC + G+A
Sbjct:   64 HKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGK-SYHGRGPIQISWNFNY--GPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDA 258          
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 3.984e-52
Identity = 106/190 (55.79%), Postives = 125/190 (65.79%), Query Frame = 2
Query:    8 RNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGN 577
            RND  CPA GFYTYDAFI AA +FPGFG +G++T R++EIAAFF QT  ETTGG   A    +  GYCF+ +    +D  D       +YYGRGPIQL+   NY +            NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D  A R+PGYG+ TNIINGGIECG G N
Sbjct:   43 RNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ----NDQSD-------RYYGRGPIQLTNRNNYEKAGTAIGQELV--NNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRN 217          
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 3.984e-52
Identity = 107/191 (56.02%), Postives = 125/191 (65.45%), Query Frame = 2
Query:    8 RNDELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNA 580
            RND  CPA GFYTYDAFI AA +FPGFG SG++T R++EIAAFF QT  ETTGG   A    +  GYCF+ +    +D  D       +YYGRGPIQL+   NY +            NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D +A R PG G+ TNIINGGIECG G NA
Sbjct:   43 RNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ----NDQSD-------RYYGRGPIQLTNQNNYEKAGNAIRQDLV--NNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNA 218          
The following BLAST results are available for this feature:
BLAST of DR403993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI12_ORYSJ1.279e-5856.12Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI11_ORYSJ3.720e-5856.08Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIA_SOLCI3.149e-5755.50Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHIA_SOLLC7.016e-5754.45Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI8_POPTR9.163e-5752.06Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 ... [more]
CHIB_SOLLC2.257e-5557.37Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIT_PETHY1.617e-5356.54Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHI10_ORYSJ2.759e-5347.98Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIQ_TOBAC3.984e-5255.79Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIP_TOBAC3.984e-5256.02Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246P02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246P02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403993 ID=DR403993; Name=DR403993; organism=Citrus sinensis; type=EST; length=582bp
GGGGTATAGAAATGATGAACTATGCCCTGCCAAAGGCTTCTACACTTATG
ATGCTTTTATAGAGGCAGCCCAAGCTTTTCCAGGCTTTGGTAACTCTGGA
AATGAAACCATGCGTAAAAGAGAAATCGCTGCCTTTTTTGCCCAAACTGG
CCGTGAAACTACTGGGGGATGGCCCGATGCACCTGGTGGCGAATATGCTT
GGGGATATTGCTTTATAAGCGAAGTTAGCCCTCCGTCCGACTACTGTGAT
CCTAACTATCCATGTCGAGGGAAGTACTATGGCCGAGGTCCAATTCAACT
CTCTTGGAATTACAATTACTTACGGTGCGGAGAAGGCCTAGGGCTAGGAG
AGGAGTTGTTGAACAATCCAGACCTTCTTGCTACTGATCCAGTACTATCA
TTCAAGTCAGCAATCTGGTTCTGGATGACTGCACAGCCACCAAAGCCATC
GTGCCACGAAGTCATTATCGACGAATGGAAACCATCAGCAAATGACGTAA
ACGCCGGCCGGCTTCCGGGATACGGTCTAACCACAAATATAATCAACGGT
GGAATTGAATGTGGCCAAGGTGGGAATGCCGC
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