DR403993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.904e-26 Identity = 70/186 (37.63%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 23 CPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 562 C K FYT +F+ AA ++ GF KREIAAFFA ET C+I+E++ S DYCD N +PC+ KYYGRGP+Q+SWNYNY +PD +A DP +SFK+A+WFWM N+V+ L G+G T ING +EC Sbjct: 107 CAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALEC 256
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.082e-25 Identity = 74/188 (39.36%), Postives = 87/188 (46.28%), Query Frame = 2 Query: 23 CPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPP--SDYCDPN----YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 562 CP K FYT AF+ A P FGN G+ KREIAAFFA ETT C I E YCD + YPC KYYGRGP+QLSWNYNY NP+ +ATD SFK+A+WFWMT +V++ G+G TT ING +EC Sbjct: 107 CPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALEC 256
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.249e-25 Identity = 67/186 (36.02%), Postives = 92/186 (49.46%), Query Frame = 2 Query: 23 CPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 562 C K FYT +F+ AA+++ GF N KREIAAFFA ET C+I+E++ + DYCD + +PC+ KYYGRGP+Q+SWN+NY +PD +A DP +SFK+A+WFWM N+V+ G+G T ING +EC Sbjct: 104 CAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALEC 253
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.023e-23 Identity = 72/192 (37.50%), Postives = 98/192 (51.04%), Query Frame = 2 Query: 23 CPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNA 580 C K FYT D+FI AA FP F NS + +REIA FA ET +C+I E++ S DYCD N YPC GK Y+GRGPIQLSWNYNY C P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC GGN+ Sbjct: 92 CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMEC-NGGNS 241
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.928e-22 Identity = 68/190 (35.79%), Postives = 89/190 (46.84%), Query Frame = 2 Query: 14 DELCPAKGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGRETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCD----PNYPCRGK--YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 562 D C K FYT DAF+ A ++ FG G+E KREIAA FA ET +C+I E+ S DYCD YPC Y+GRGPIQLSWN+NY P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC Sbjct: 85 DSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALEC 238
BLAST of DR403993 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.173e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 425 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 562 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of DR403993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403993 ID=DR403993; Name=DR403993; organism=Citrus sinensis; type=EST; length=582bpback to top |