DR403992

Overview
NameDR403992
Unique NameDR403992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:546..1117. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.782e-42
Identity = 84/90 (93.33%), Postives = 89/90 (98.89%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPIILDLVLLAELSTRIQ K+EGEGKFHSFHPVATILSYLTKAPLVPPGTPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  422 EDSLLAAPIILDLVLLAELSTRIQFKSEGEGKFHSFHPVATILSYLTKAPLVPPGTPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 4.782e-42
Identity = 84/90 (93.33%), Postives = 89/90 (98.89%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPIILDLVLLAELSTRIQ K+EGEGKFHSFHPVATILSYLTKAPLVPPGTPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  422 EDSLLAAPIILDLVLLAELSTRIQFKSEGEGKFHSFHPVATILSYLTKAPLVPPGTPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.100e-41
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLL APIILDLVLLAELSTRIQLKAEGE K HSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  421 EDSLLRAPIILDLVLLAELSTRIQLKAEGEDKLHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 4.048e-41
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPIILDLVLLAE+STRIQ K+E EGKFHSFHPVAT LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  421 EDSLLAAPIILDLVLLAEISTRIQFKSEKEGKFHSFHPVATKLSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.538e-40
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPIILDLVLLAEL+TRIQ  +E EGKFHSFHPVAT+LSYL+KAPLVPPGTPVVNALSKQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  421 EDSLLAAPIILDLVLLAELTTRIQFMSENEGKFHSFHPVATLLSYLSKAPLVPPGTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 57/90 (63.33%), Postives = 75/90 (83.33%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPIILDLV+LAE+++RI +K + + +F +FHPV ++LSYL KAP+VP    VVNAL KQRA +ENI +ACVG+AP+NNM+LE +
Sbjct:  421 EDSLLAAPIILDLVILAEVTSRITMKKQDDDQFATFHPVLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFKACVGIAPDNNMLLEQR 510          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26
Identity = 57/90 (63.33%), Postives = 73/90 (81.11%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLA+PIILDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPV+NA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  415 EDSLLASPIILDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVINAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 6.275e-26
Identity = 56/90 (62.22%), Postives = 72/90 (80.00%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPI+LDLVLL EL  R+    + + +   FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  418 EDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHPVLSVLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.070e-25
Identity = 57/90 (63.33%), Postives = 72/90 (80.00%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLA+PI LDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPVVNA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  415 EDSLLASPIFLDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVVNAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.398e-25
Identity = 55/90 (61.11%), Postives = 73/90 (81.11%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRAC+GL P+N+M+LE+K
Sbjct:  418 EDSLLAAPIMLDLALLTELCQRVSFCTDADPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACLGLPPQNHMLLEHK 507          
The following BLAST results are available for this feature:
BLAST of DR403992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_PHAVU4.782e-4293.33Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH4.782e-4293.33Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_HORVU3.100e-4194.44Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_BRANA4.048e-4194.44Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO3_ARATH1.538e-4091.11Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_DICDI1.264e-2663.33Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1A_XENLA4.804e-2663.33Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_RAT6.275e-2662.22Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1B_XENLA1.070e-2563.33Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1_MACFA1.398e-2561.11Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O23 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403992 ID=DR403992; Name=DR403992; organism=Citrus sinensis; type=EST; length=572bp
GGGGAGGACTCTCTTTTGGCTGCTCCAATCATTCTAGATTTGGTTCTGCT
GGCTGAACTCAGCACCAGGATCCAGCTCAAAGCTGAAGGAGAGGGAAAAT
TCCACTCTTTCCACCCTGTGGCTACAATTCTCAGCTACCTCACCAAGGCT
CCTCTGGTCCCTCCAGGCACACCAGTGGTGAATGCGCTGTCGAAGCAGCG
TGCAATGCTTGAGAACATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGA
ACAACATGATTTTGGAATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGG
AAGAACCGGTATTCCCTTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCA
TTTAATTACTGATTGTAATGTCTTGTGTCATGAAATTGTGGTTAATATTA
GTGTCCTGTATGTTTGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGT
AGCCCATTGCCTTTGTAGCTCATTTCGGAGCATGCAATCTCTTGTATTGC
AAGTAGATAATATATGGAAGTTCATAAATAACTGTATTGCGGTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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