DR403992

Overview
NameDR403992
Unique NameDR403992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:546..1117. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.398e-25
Identity = 56/90 (62.22%), Postives = 73/90 (81.11%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  418 EDSLLAAPIMLDLALLTELCQRVSFCTDMDPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.938e-25
Identity = 55/90 (61.11%), Postives = 71/90 (78.89%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPI+LDLVLL EL  R+    + + +   FH V ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  418 EDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHTVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.061e-25
Identity = 55/90 (61.11%), Postives = 70/90 (77.78%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLAAPI+LDL LL EL  R+    + +    SFHPV ++L +L KAPL PPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  418 EDSLLAAPIMLDLALLTELCQRVSFCTDVDPDPQSFHPVLSLLGFLFKAPLAPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.179e-22
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLK-AEGEGK-FHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 273
            EDSLLA P+ILDLV+L ELSTRIQL+ AE E   +  F PV ++LSYL KAPLVP G+ VVN+L +QRA +ENILR C+GL P ++M LE +
Sbjct:  422 EDSLLATPLILDLVILGELSTRIQLRNAEKESAPWVPFKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCIGLPPISHMTLEQR 513          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 5.324e-17
Identity = 46/93 (49.46%), Postives = 58/93 (62.37%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKA-----EGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 267
            EDSLLA P+I+DL+++ E  TR+  K      E  GKF +F+PV T LSY  KAPL  PG   VN L+KQR  LEN LR  +GL  +N +  E
Sbjct:  437 EDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFE 529          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.082e-17
Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 267
            EDSLLA P+I+DLV+  E +TR+Q+K  G+  +   +PVA++LSY  KAPL  PG   +N L+KQR  L N+L   VGL  +N +  E
Sbjct:  429 EDSLLATPLIIDLVVATEFATRVQVKGPGKSDYDELYPVASLLSYWLKAPLARPGFKPINGLNKQRQQLVNLLSVLVGLPIDNELRFE 516          
BLAST of DR403992 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15
Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 1
Query:    4 EDSLLAAPIILDLVLLAELSTRIQLK-------AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGL 240
            EDSLLA P+I+DL+++ E  +R+  +       AE +G F +F+PV + LSY  KAPL  PG   +N L+KQR  LEN LR  +GL
Sbjct:  440 EDSLLATPLIIDLIVMTEFCSRVTYRNVDGQDGAEAKGDFENFYPVLSFLSYWLKAPLTKPGYQPINGLNKQRTALENFLRLLIGL 525          
The following BLAST results are available for this feature:
BLAST of DR403992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HUMAN1.398e-2562.22Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MOUSE6.938e-2561.11Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_BOVIN9.061e-2561.11Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_DROME7.179e-2261.96Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_YEAST5.324e-1749.46Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANAL9.082e-1747.73Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_CANGA8.500e-1546.51Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O23 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403992 ID=DR403992; Name=DR403992; organism=Citrus sinensis; type=EST; length=572bp
GGGGAGGACTCTCTTTTGGCTGCTCCAATCATTCTAGATTTGGTTCTGCT
GGCTGAACTCAGCACCAGGATCCAGCTCAAAGCTGAAGGAGAGGGAAAAT
TCCACTCTTTCCACCCTGTGGCTACAATTCTCAGCTACCTCACCAAGGCT
CCTCTGGTCCCTCCAGGCACACCAGTGGTGAATGCGCTGTCGAAGCAGCG
TGCAATGCTTGAGAACATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGA
ACAACATGATTTTGGAATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGG
AAGAACCGGTATTCCCTTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCA
TTTAATTACTGATTGTAATGTCTTGTGTCATGAAATTGTGGTTAATATTA
GTGTCCTGTATGTTTGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGT
AGCCCATTGCCTTTGTAGCTCATTTCGGAGCATGCAATCTCTTGTATTGC
AAGTAGATAATATATGGAAGTTCATAAATAACTGTATTGCGGTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
back to top