DR403984

Overview
NameDR403984
Unique NameDR403984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9848 contig Csv1_Contig9848:65..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 53/220 (24.09%), Postives = 109/220 (49.55%), Query Frame = 3
Query:   36 LKKLRXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            ++ ++   E WG F +VNH +   +M  ++++        +E  +R  +++A  G  A   +    +    + +     V++     D     RE +  +A+ +++LA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   V +NG+  +V HRV
Sbjct:   21 MEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLP-VSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRV 236          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.130e-11
Identity = 64/217 (29.49%), Postives = 93/217 (42.86%), Query Frame = 3
Query:   60 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLYDMASSQA-VADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 671
            E  G F+VVNH + + L+A+  + V     +PL  K+R       S GY +        K P  E L      S  A V D+        H+R  E   +Y   +  L++++   L ES+G+        F+      R+N Y      + + G   H D   LTIL  D NVGGL+V    G +  + P     +VN+GD     SNGR  +  HR
Sbjct:   67 ERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQD-NVGGLQV-HTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHR 281          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11
Identity = 45/125 (36.00%), Postives = 65/125 (52.00%), Query Frame = 3
Query:  315 RETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW----PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDR-AGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            R+ + KY   +   A  +   LAES+ L    F ++        R+ +Y   P S    GVQ HTD+  LT++  D NV GLE++D  +  F+ V P PG L+ NLGDI  + +N R  +  HRV
Sbjct:  216 RKALVKYHDQMLAFANHVMSLLAESLELSPDAFDEFCSDPTTSIRLLRY---PSSPNRLGVQEHTDADALTLMSQD-NVKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRV 336          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11
Identity = 65/221 (29.41%), Postives = 104/221 (47.06%), Query Frame = 3
Query:   57 SEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIA-GSGYM-APTQKNPLYEALG--------LYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL------MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 671
            S EWG F+VVNH +    +A++++V  E  +LP + K    +VIA   GY         L + LG        L+ +   ++  ++    +  P  RE  E+YA A++ +   L   L+  +GL        S   D     +IN Y   P    + GV  HTD   +TIL  +E V GL+V  +   +  V  +P  L++++GD   + SNG+  +V HR
Sbjct:   66 SREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEK----EVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNE-VQGLQV-HKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHR 280          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 68/248 (27.42%), Postives = 108/248 (43.55%), Query Frame = 3
Query:    6 TIDLR*FPKQLKKLRXXS-EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRR---NTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDS-----VFQDWPCQ--FRINKY---------NFAPESVGSP-----GVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            TIDL     QL +L   + EE+G F+VVNH V   +++ + +   E        KR+   +T    G   + P       E L L+    S +        D        +  Y +A+++L  ++    AE + + D      + +D       RIN Y         N+ P  + +      G   H+D   LTIL+ + NVGGL++    G ++PV P P    V +GD   V +NGR ++V+HRV
Sbjct:   22 TIDLSLERSQLSELVVKACEEYGFFKVVNHSVPKEVISRLDEEGIEFFSKNSSEKRQAGTSTPFGYGCKNIGPNGDKGELEYLLLHSNPISISERSKTIAKDHPIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSLLRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQILTILRSN-NVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRV 268          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 52/220 (23.64%), Postives = 108/220 (49.09%), Query Frame = 3
Query:   36 LKKLRXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            ++ ++   E WG F  VNH +S  +M  ++++  E     +E  +R  +++A  G      +    +    + +     V+      D     R+ ++++A  ++ELA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  ++++NLGD   V +NG+  +V HRV
Sbjct:   21 MELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCME--QRFKEMVATKGLECVQSEIDDLDWESTFFLRHLP-VSSISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRV 236          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 52/222 (23.42%), Postives = 109/222 (49.10%), Query Frame = 3
Query:   30 KQLKKLRXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            K ++ ++   E WG F +VNH +   +M  ++++        +E  +R  +++A  G  A   +    +    + +      ++     D     RE +  +A+ +++LA +L   L E++GL      ++ +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  +++VNLGD   V +NG+  +V HRV
Sbjct:   19 KTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPT-SNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRV 236          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 49/222 (22.07%), Postives = 104/222 (46.85%), Query Frame = 3
Query:   30 KQLKKLRXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            K L+++    + WG F +VNH +    +  ++++  +     +E + + T +  G         +  +E+           ++      D     ++ ++++A+ ++ LA +L   L E++GL     +             +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+   ++VNLGD   V +NGR  +V HRV
Sbjct:   19 KILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEAAQAEVNDMDWESTFFLRHLPESNISQMS---DLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRV 236          
The following BLAST results are available for this feature:
BLAST of DR403984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACCO3_PETHY1.631e-1124.091-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
GAO1B_WHEAT2.130e-1129.49Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
ISP7_SCHPO2.782e-1136.00Sexual differentiation process protein isp7 OS=Sch... [more]
FLS_PETCR2.782e-1129.41Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
G2OX2_PEA4.745e-1127.42Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum ... [more]
ACCO_PEA4.745e-1123.641-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO4_SOLLC6.198e-1123.421-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO1_CUCME8.094e-1122.071-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403984 ID=DR403984; Name=DR403984; organism=Citrus sinensis; type=EST; length=686bp
GGGGGACGATAGATCTGCGGTAATTCCCGAAGCAGCTGAAGAAACTGAGA
GNNNNNAGCGAGGAATGGGGATGCTTCAGGGTGGTGAACCACAAGGTCTC
GTCAACGCTGATGGCGGAAATGAAGCAAGTGGTGGGGGAGCTTTTGGATC
TTCCTCTCGAGATCAAACGACGCAACACCGATGTGATCGCCGGCAGCGGC
TACATGGCTCCCACCCAGAAGAATCCTCTGTATGAAGCTTTGGGTCTCTA
CGACATGGCTTCTTCTCAAGCTGTTGCTGACTTTTGTTCTCACCTGGATG
CCTCTCCTCATCAGAGAGAGACAATAGAGAAATATGCTCAAGCAATACAA
GAGTTGGCCGTGGATTTGGCGCATAAATTGGCCGAGAGTATGGGGTTGAT
GGACAGTGTGTTCCAGGATTGGCCTTGCCAGTTTAGGATAAACAAGTACA
ACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAGTGCAATTACACACAGAT
TCAGGGTTCCTTACTATTCTTCAAGATGATGAAAATGTTGGTGGCCTCGA
AGTGATGGACAGAGCTGGTGCATTTGTACCTGTTGATCCCTTGCCCGGCA
CCCTCCTTGTCAATCTTGGAGACATTGCCACGGTATGGAGTAACGGAAGG
TTGCTCAATGTGAAGCATAGAGTGCAGTGCAAGGAA
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