CX069514

Overview
NameCX069514
Unique NameCX069514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7623 contig Csv1_Contig7623:203..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C69_ORYSJ (Probable protein phosphatase 2C 69 OS=Oryza sativa subsp. japonica GN=Os09g0459600 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 58/192 (30.21%), Postives = 99/192 (51.56%), Query Frame = -1
Query:  345 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVI-CRGGNAIAVSRDHKPDQT-DERQRIEDAG---GFVMWAGTWRVG------GVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEA-YQRGSADNITCVVVRFL 884
            A+  A+  TD +F          +G+T +  ++    + VA+VGDSR ++    G+   +S DH+ D   DE QR+   G   G +   G   VG      G L +SR+ GD  + + ++  P +++  + ++   +I+ASDG+WD +T E A+   +     + AA R++ EA + RG  D+ TC+VV  L
Sbjct:  109 ALVAAFVKTDKDFQAVAET----SGTTVTFVVIDEWVVTVASVGDSRCILESADGSLYHLSADHRFDSNQDEVQRVTACGSKVGKLNLVGGPEVGPLRCWPGGLCLSRSIGDMDVGECIIPVPHVKQVKLSNAGGRIIIASDGVWDDLTFEMALECSRGFPS-DIAANRIVNEAIHPRGLRDDTTCIVVDIL 295          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C19_ARATH (Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana GN=At2g20050 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 62/213 (29.11%), Postives = 104/213 (48.83%), Query Frame = -1
Query:  354 DSEFLKSENNQNRD------AGSTASTAILVGDRLLVANVGDSRAVIC--RGGNAIAV--SRDHKPDQTDERQRIEDAGGFVM---------------WAGT-----------WRVGGVL---AVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQ-----RGSADNITCVVV 857
            +S FL + +  + D      +G+TA T ++ G  + VAN GDSRAV+   R G+ +AV  S D  P + DE +R++  G  V+               W GT           W   G+    A +R+ GD + +   VVA+PEI    +     F ++ASDG+++ ++++  V M+   +DP +A   ++ E+Y+         D+IT +VV
Sbjct:  184 NSAFLTTNSQLHADLVDDSMSGTTAITVMVRGRTIYVANAGDSRAVLAEKRDGDLVAVDLSIDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCW-GTEEDDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIAVVELTPDNPFFVVASDGVFEFISSQTVVDMVAKHKDPRDACAAIVAESYRLWLQYETRTDDITIIVV 395          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C22_ORYSJ (Putative protein phosphatase 2C 22 OS=Oryza sativa subsp. japonica GN=Os02g0607500 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 52/145 (35.86%), Postives = 72/145 (49.66%), Query Frame = -1
Query:  477 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRI--------------EDAGGFV--MWAGTWRVGGVLAVSRAF---------GDRLLK--------QYVVADPEIQEEVIDSSLEFLILASDGLWDV 812
            GSTA   I+ G+++ V NVGDSR V+ + G AI +S DHKP+   ERQRI              +D+GG +   W G + + G L+ SRA          GD   K        Q V   P+I+   I    EFL++ASDG+  +
Sbjct:  235 GSTACVVIIRGNQITVGNVGDSRCVLSKNGQAIDLSTDHKPNVPLERQRILRVGGQVWREKFPAKDSGGEIREQW-GPYCIEGKLSTSRALAGIFLTTISGDFAYKNIVYRPQYQMVTHFPDIRVAKITGDTEFLVIASDGICSI 378          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1D_MOUSE (Protein phosphatase 1D OS=Mus musculus GN=Ppm1d PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 68/219 (31.05%), Postives = 102/219 (46.58%), Query Frame = -1
Query:  354 SEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN-------AIAVSRDHKPDQTDERQRIEDAGGFVM---------W-------AGTWRVGGV------LAVSRAFGDRLL------KQYVVADPEIQEEVID-SSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE-----------AAKRLMQEAYQRG-----SADNITCVVV 854
            +E+ K+       +G+TAS  I+ G ++ VA+VGDS  V+    +       A+ V++DHKP+   ER+RIE  GG VM         W       +G  R   V      LAV+RA GD         K  V  +P+     +D    +++IL SDGLW++V  ++A++M    QD EE            AK L+  A  R       ADN + +V+
Sbjct:  151 AEWPKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHSGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGKFVVSPEPDTSVHTLDPRKHKYIILGSDGLWNMVPPQDAISM---CQDQEEKKYLMGEQGQSCAKMLVNRALGRWRQRMLRADNTSAIVI 366          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1D_HUMAN (Protein phosphatase 1D OS=Homo sapiens GN=PPM1D PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 68/219 (31.05%), Postives = 106/219 (48.40%), Query Frame = -1
Query:  354 SEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGN-------AIAVSRDHKPDQTDERQRIEDAGGFVM-WAGTWRV----------GGV-----------LAVSRAFGDR-----LLKQYVVA-DPEIQEEVID-SSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE-----------AAKRLMQEAYQRG-----SADNITCVVV 854
            +E+ K+       +G+TAS  I+ G ++ VA+VGDS  V+    +       A+ V++DHKP+   ER+RIE  GG VM  +G  RV          G V           LAV+RA GD         ++VV+ +P+     +D    +++IL SDGLW+++  ++A++M    QD EE            AK L+  A  R       ADN + +V+
Sbjct:  158 AEWPKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISM---CQDQEEKKYLMGEHGQSCAKMLVNRALGRWRQRMLRADNTSAIVI 373          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: CYAA_YEAST (Adenylate cyclase OS=Saccharomyces cerevisiae GN=CYR1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 45/161 (27.95%), Postives = 82/161 (50.93%), Query Frame = -1
Query:  339 AGSTASTAILVGDRLLVANVGDSRAVICRG-GNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP-IQDPEEAAKRLMQEAYQRGSADNITCVVVRFLAN 815
            +G+ ++   + G +L  AN+GD  A++ +  G+   +++ H P + +E +RI  +GG+V      ++ GV+ VSRA G   L  ++ A P+I    +  + E LI+A+  LW+ +  +    + +    DP  AA  L   A   G  +NIT + +    N
Sbjct: 1470 SGACSTVIYIRGKKLFAANLGDCMAILSKNNGDYQTLTKQHLPTKREEYERIRISGGYV---NNGKLDGVVDVSRAVGFFDLLPHIHASPDISVVTLTKADEMLIVATHKLWEYMDVDTVCDIARENSTDPLRAAAELKDHAMAYGCTENITILCLALYEN 1627          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C60_ORYSJ (Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11
Identity = 54/176 (30.68%), Postives = 82/176 (46.59%), Query Frame = -1
Query:  381 GSTASTAILVGDRLLVANVGDSRAVICRG----GNAIAV--SRDHKPDQTDERQRI-----EDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ---------------------YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGS 812
            GS     ++ G  L VANVGDSR V+ R     G  +AV  S +H       R+ +     ED    V+    WRV G++ V R+ GD  LK+                      + ++P I  + +    +FLI ASDGLW+ +TN+EAV ++        +A+RL++ A Q  +
Sbjct:  149 GSCCLVGVICGGILYVANVGDSRVVLGRHVKATGEVLAVQLSAEHNVSIESVRKELQSMHPEDRHIVVLKHNVWRVKGLIQVCRSIGDAYLKRSEFNREPLYAKFRLREPFHKPILSSEPSISVQPLQPHDQFLIFASDGLWEHLTNQEAVDIVHS-SPRNGSARRLIKAALQEAA 323          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11
Identity = 50/162 (30.86%), Postives = 75/162 (46.30%), Query Frame = -1
Query:  348 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPD-----QTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRG--SADNITCVVVRF 812
            GSTA   ++ G++L+V + GDSR V+ R G A A+S DHKPD     + +ER   ED                             Q +  +P+I    I   +EFL++A++GLW  +TN+  V            A+ + +E  Q G  S DN T ++V F
Sbjct:  385 GSTACVVVIRGNQLIVGHAGDSRCVLSRNGQASALSVDHKPDRDFACKKNERLPPED-----------------------------QMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGLPSGDNTTVILVLF 517          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C79_ARATH (Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11
Identity = 53/177 (29.94%), Postives = 84/177 (47.46%), Query Frame = -1
Query:  381 GSTASTAILVGDRLLVANVGDSRAVICR------GGNAIAVSRDHKPDQTDERQRI-----EDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ---------------------YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEA-AKRLMQEAYQRGS 812
            GS     ++   +L VANVGDSRAV+ +        NA+ +S +H       RQ +     +D+   V+    WRV G++ VSR+ GD  LK+                      +  +P I    +    +FLI ASDGLW+ ++N+EAV +++    P    A+RL++ A Q  +
Sbjct:  150 GSCCLIGVVCDGKLYVANVGDSRAVLGKVIKATGEVNALQLSAEHNVSIESVRQEMHSLHPDDSHIVVLKHNVWRVKGIIQVSRSIGDVYLKKSEFNKEPLYTKYRLREPMKRPILSWEPSITVHDLQPDDQFLIFASDGLWEQLSNQEAVEIVQ--NHPRNGIARRLVKAALQEAA 324          
The following BLAST results are available for this feature:
BLAST of CX069514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
P2C69_ORYSJ1.119e-1130.21Probable protein phosphatase 2C 69 OS=Oryza sativa... [more]
P2C19_ARATH1.119e-1129.11Protein phosphatase 2C and cyclic nucleotide-bindi... [more]
P2C22_ORYSJ1.909e-1135.86Putative protein phosphatase 2C 22 OS=Oryza sativa... [more]
PPM1D_MOUSE3.256e-1131.05Protein phosphatase 1D OS=Mus musculus GN=Ppm1d PE... [more]
PPM1D_HUMAN3.256e-1131.05Protein phosphatase 1D OS=Homo sapiens GN=PPM1D PE... [more]
CYAA_YEAST5.553e-1127.95Adenylate cyclase OS=Saccharomyces cerevisiae GN=C... [more]
P2C60_ORYSJ7.253e-1130.68Probable protein phosphatase 2C 60 OS=Oryza sativa... [more]
P2C19_ORYSJ7.253e-1130.86Probable protein phosphatase 2C 19 OS=Oryza sativa... [more]
P2C79_ARATH9.473e-1129.94Probable protein phosphatase 2C 79 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069514 ID=CX069514; Name=CX069514; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTCTTTTAGGAAATTGAAACTTTAGAAGTCTTTGCC
AATTCTTTACACATGCATACATACACATTTCTAGCTACATTTCGAGGACC
GAGAACAGATGTTAAACTTCGGACACATCTATTCCAGAGACTGATAATAC
GTAATACACATTAACGGCCGGGGTAAGCTTTTTGTTCATGTTCTATCATT
ACAAAGTACAACGAAACTGTAATTTTTCTATGACTACTAGCTGTAGACCA
CTGAAAGGATGCCCATGTAGAGAACAAAAGCAGAGCGGTGGCTATGAAAG
GATGTTCATGCAGAGCCAGGAAAGGATGAACCACCTTGATTGGCCAAGAA
CCGAACAACGACACAGGTGATGTTGTCTGCGCTGCCTCTCTGATATGCCT
CCTGCATCAGCCTCTTCGCTGCCTCCTCTGGATCCTGGATTGGTTTGATC
ATCGCAACAGCTTCCTCATTTGTGACGACATCCCAAAGTCCATCACTTGC
AAGGATAAGAAACTCAAGGGAGCTGTCAATAACTTCCTCCTGAATTTCGG
GATCAGCAACAACATACTGCTTCAAGAGTCTGTCACCAAATGCGCGAGAA
ACGGCAAGAACTCCTCCCACTCTCCAAGTTCCAGCCCACATCACAAACCC
TCCTGCATCCTCAATCCGTTGACGCTCATCTGTTTGGTCTGGTTTGTGAT
CTCGCGATACGGCAATAGCATTACCGCCCCTGCATATAACAGCTCTGGAG
TCACCCACATTTGCAACAAGTAAGCGATCACCAACAAGGATGGCAGTGGA
AGCAGTAGATCCAGCATCCCTGTTTTGATTGTTTTCTGACTTCAGAAATT
CCGAGTCTGTGTGGCTGTATGCATCAGCTATTGC
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