CX069514

Overview
NameCX069514
Unique NameCX069514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7623 contig Csv1_Contig7623:203..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.162e-33
Identity = 81/190 (42.63%), Postives = 117/190 (61.58%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDA----------GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW-AGTWRVGGV-LAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-PIQDPEEAAKRLMQEAYQRGSADNITCVVV 884
            A++ A+  TD  F + E + +R +          G TA  ++LV ++L VANVGDSRA++CR G+  A+S+ H     DER R+   GG + W   TWRV    L V+R+ GD  LK  V A+PEI E ++ +  EFL++ASDGLWDV+ +EE + +I+  +++P   +KRL  EA  RGS DNIT +VV
Sbjct:  458 ALSQAFVRTDLAF-RQELDSHRQSKRVSQKDWHPGCTAIASLLVENKLFVANVGDSRAILCRAGHPFALSKAHLATCIDERNRVIGEGGRIEWLVDTWRVAPAGLQVTRSIGDDDLKPAVTAEPEISETILSADDEFLVMASDGLWDVMNDEEVIGIIRDTVKEPSMCSKRLATEAAARGSGDNITVIVV 646          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.453e-32
Identity = 85/184 (46.20%), Postives = 116/184 (63.04%), Query Frame = -1
Query:  345 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIA-VSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFL 884
            AI  AY  TD   L  +N      GSTA TAI++ G +++VANVGDSRA++CR  + +  ++ DH+PD+  ER  ++  GGFV        RV G LA++RAFGD  LK+++   P I+   I    +FLILASDGLW V++N+E    IK   + EEAAK L+ +A  RGS D+I+CVVV FL
Sbjct:   56 AIKRAYKSTDDYIL--QNVVGPRGGSTAVTAIVIDGKKIVVANVGDSRAILCRESDVVKQITVDHEPDK--ERDLVKSKGGFVSQKPGNVPRVDGQLAMTRAFGDGGLKEHISVIPNIEIAEIHDDTKFLILASDGLWKVMSNDEVWDQIKKRGNAEEAAKMLIDKALARGSKDDISCVVVSFL 235          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.660e-31
Identity = 81/187 (43.32%), Postives = 109/187 (58.29%), Query Frame = -1
Query:  354 LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK--------------PIQDPEE---------AAKRLMQEAYQRGSADNITCVVV 845
            ++SE     + GSTA  A++    ++VAN GDSR V+CRG   +A+S DHKPD+ DER RIE  GG V+    +RV G+LA+SR+ GDR LK +V+  PE+         + LILASDGLWDVV+NEEA  + +              P+ D  E         AA  LM+ A ++GS DNIT +VV
Sbjct:  189 VRSEPVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGKEPVALSIDHKPDRKDERARIEAQGGKVIQWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVMVVPRAKDDDCLILASDGLWDVVSNEEACKVARRQILLWHKNNGAASPLSDEGEGSTDPAAQAAADYLMRLALKKGSEDNITVIVV 375          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.660e-31
Identity = 85/194 (43.81%), Postives = 117/194 (60.31%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSE--NNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------PIQDPE--------EAAKRLMQEAYQRGSADNITCVVV 884
            A+A  ++  D E   +E  +   +  GSTA  A++   R++VAN GDSRAV+ RGG A+ +S DHKPD+ DE +R+E AGG V+    +R+ GVLA SR+ GD  LK YV+A+PE+         EFLILASDGLWDVV+N+ A  + +         + PE        +AA  L++ A  RGS DNI+ VVV
Sbjct:  193 AMAACFTRVDGEVGGAEEADTGEQTVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTDKDEFLILASDGLWDVVSNDVACKIARNCLSGRAASKYPESVSGSTAADAAALLVELAISRGSKDNISVVVV 386          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.832e-31
Identity = 72/168 (42.86%), Postives = 108/168 (64.29%), Query Frame = -1
Query:  384 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV-MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRG 884
            A   A+  TD +FL+    +   +G+   TA++    ++V+N+GD RAV+CR G A A++ DHKP + DE++RIE  GG+V    G WRV G+LAVSR+ GD  LK++VVA+PE +   ++  +EFL+LASDGLWDVV+N+EAV  +  +    +  K   +E   +G
Sbjct:  191 AFKAAFLRTDRDFLE----KGVVSGACCVTAVIQDQEMIVSNLGDCRAVLCRAGVAEALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAVSRSIGDAHLKKWVVAEPETRVLELEQDMEFLVLASDGLWDVVSNQEAVYTVLHVLAQRKTPKESEEENLVQG 354          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C04_ORYSJ (Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.831e-31
Identity = 80/189 (42.33%), Postives = 111/189 (58.73%), Query Frame = -1
Query:  354 AIADAYSHTDSEFL---------KSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA-GTWRVGGV-LAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-PIQDPEEAAKRLMQEAYQRGSADNITCVVV 884
            A+ +A+  TD  F          K    +N   G TA TA++V ++L VAN GD RA++ R G    ++RDH      ER+RI   G  V W   TWRVG   L V+R+ GD  LK  V A PE+ E ++    EFL++ASDGLWDV++NE+ +++IK  +++P   +KRL  EA  RGS DNIT +VV
Sbjct:  457 ALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLSIIKDTVKEPGMCSKRLATEAAARGSKDNITVIVV 645          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1E_RAT (Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm1e PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.076e-30
Identity = 72/182 (39.56%), Postives = 106/182 (58.24%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVV 884
            A+  A+  TD  F++    ++   G+T     + G+ L VA VGDS+ ++ R G A+ + + HKPD+ DE+QRIE  GG V+W G WRV G L+VSRA GD   K Y+  D +    V+D + ++LILA DG +D V  +EAV ++     +   D    A +L+  A   GS+DNIT +VV
Sbjct:  302 ALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVV 483          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1E_MOUSE (Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.076e-30
Identity = 72/182 (39.56%), Postives = 106/182 (58.24%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVV 884
            A+  A+  TD  F++    ++   G+T     + G+ L VA VGDS+ ++ R G A+ + + HKPD+ DE+QRIE  GG V+W G WRV G L+VSRA GD   K Y+  D +    V+D + ++LILA DG +D V  +EAV ++     +   D    A +L+  A   GS+DNIT +VV
Sbjct:  302 ALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVV 483          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1E_HUMAN (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.406e-30
Identity = 71/182 (39.01%), Postives = 106/182 (58.24%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVV 884
            A+  A+  TD  F++    ++   G+T     + G+ L VA VGDS+ ++ R G A+ + + HKPD+ DE+QRIE  GG ++W G WRV G L+VSRA GD   K Y+  D +    V+D + ++LILA DG +D V  +EAV ++     +   D    A +L+  A   GS+DNIT +VV
Sbjct:  316 ALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCIVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVV 497          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.406e-30
Identity = 82/171 (47.95%), Postives = 106/171 (61.99%), Query Frame = -1
Query:  354 RDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQD-------PE--------EAAKRLMQEAYQRGSADNITCVVV 821
            R  GSTA  A++   R++VAN GDSRAV+ RGG A+ +S DHKPD+ DE +R+E AGG V+    +RV GVLA SR+ GD  LK +V A+PE++        EFLILASDGLWDVV+NE A  + +   +       PE        +AA  L + A  RGS DNI+ VVV
Sbjct:  201 RTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYLKPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNEVACKIARNCLNGRAASMFPESVSGSSAADAAALLAELAVSRGSRDNISVVVV 371          
The following BLAST results are available for this feature:
BLAST of CX069514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
P2C31_ARATH5.162e-3342.63Protein kinase and PP2C-like domain-containing pro... [more]
P2C28_ARATH7.453e-3246.20Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
P2C50_ORYSJ1.660e-3143.32Probable protein phosphatase 2C 50 OS=Oryza sativa... [more]
P2C08_ORYSJ1.660e-3143.81Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]
P2C14_ARATH2.832e-3142.86Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C04_ORYSJ4.831e-3142.33Protein kinase and PP2C-like domain-containing pro... [more]
PPM1E_RAT1.076e-3039.56Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm... [more]
PPM1E_MOUSE1.076e-3039.56Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE... [more]
PPM1E_HUMAN1.406e-3039.01Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]
P2C51_ORYSJ1.406e-3047.95Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_11A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069514 ID=CX069514; Name=CX069514; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTCTTTTAGGAAATTGAAACTTTAGAAGTCTTTGCC
AATTCTTTACACATGCATACATACACATTTCTAGCTACATTTCGAGGACC
GAGAACAGATGTTAAACTTCGGACACATCTATTCCAGAGACTGATAATAC
GTAATACACATTAACGGCCGGGGTAAGCTTTTTGTTCATGTTCTATCATT
ACAAAGTACAACGAAACTGTAATTTTTCTATGACTACTAGCTGTAGACCA
CTGAAAGGATGCCCATGTAGAGAACAAAAGCAGAGCGGTGGCTATGAAAG
GATGTTCATGCAGAGCCAGGAAAGGATGAACCACCTTGATTGGCCAAGAA
CCGAACAACGACACAGGTGATGTTGTCTGCGCTGCCTCTCTGATATGCCT
CCTGCATCAGCCTCTTCGCTGCCTCCTCTGGATCCTGGATTGGTTTGATC
ATCGCAACAGCTTCCTCATTTGTGACGACATCCCAAAGTCCATCACTTGC
AAGGATAAGAAACTCAAGGGAGCTGTCAATAACTTCCTCCTGAATTTCGG
GATCAGCAACAACATACTGCTTCAAGAGTCTGTCACCAAATGCGCGAGAA
ACGGCAAGAACTCCTCCCACTCTCCAAGTTCCAGCCCACATCACAAACCC
TCCTGCATCCTCAATCCGTTGACGCTCATCTGTTTGGTCTGGTTTGTGAT
CTCGCGATACGGCAATAGCATTACCGCCCCTGCATATAACAGCTCTGGAG
TCACCCACATTTGCAACAAGTAAGCGATCACCAACAAGGATGGCAGTGGA
AGCAGTAGATCCAGCATCCCTGTTTTGATTGTTTTCTGACTTCAGAAATT
CCGAGTCTGTGTGGCTGTATGCATCAGCTATTGC
back to top