CX069514

Overview
NameCX069514
Unique NameCX069514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7623 contig Csv1_Contig7623:203..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26
Identity = 74/189 (39.15%), Postives = 115/189 (60.85%), Query Frame = -1
Query:  348 AYSHTDSEFLKSENNQNR-DAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY---------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-KPIQDPEE---AAKRLMQEAYQRGSADNITCVVVRF 872
            ++  TDS+F +  ++QN   +G+TA TA++ G  LLVAN GD RAV+ R G AI +S+DH+    +ER+RIE  GG+V       + G LAV+RA GD  L+           + A+PE++   +    EFLI+ SDG+WD  +N+ AV    K +Q+  +     K++++EA +RG++DN+T V+V F
Sbjct:  134 SFVQTDSQFAERCSHQNALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYV---DDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAVDFTRKRLQEHNDLRLCCKQIVEEAIRRGASDNLTAVMVSF 319          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1F_MOUSE (Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.583e-26
Identity = 66/182 (36.26%), Postives = 100/182 (54.95%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVV 884
            A+ +A+  TD  FL+    +   +G+T   A++ G  L VA +GDS+ ++ + G  + +   HKP++ DE+ RIE  GGFV     WRV G LAVSRA GD   K YV  + +     +  S ++L+LA DG +DVV + E   ++     +   +    A+ L+  A  RGS DNIT +VV
Sbjct:  227 ALKEAFRLTDEMFLQKAKRERLQSGTTGVCALIAGAALHVAWLGDSQVILVQQGRVVKLMEPHKPERQDEKARIEALGGFVSLMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRELTGSEDYLLLACDGFFDVVPHHEVTGLVHGHLLRHKGNGMRIAEELVAVARDRGSHDNITVMVV 408          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: ILKAP_HUMAN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.583e-26
Identity = 80/202 (39.60%), Postives = 113/202 (55.94%), Query Frame = -1
Query:  351 IADAYSHTDSEFLKSENNQNR--DAGSTASTAILVGDRLLVANVGDSRAVICRGGN------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE----------------AAKRLMQEAYQRGSADNITCVVVR 881
            + D + HTD EFLK  ++Q      GSTA+  + V + L +AN+GDSRA++CR         A+++S++H P Q +ER RI+ AGG V      RV GVL VSR+ GD   K+  V + P+I+   +  +  F++LA DGL+ V T EEAV  I    + E+                A  RL  +A QRGSADN+T +VVR
Sbjct:  191 LLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEKIQTREGKSAADARYEAACNRLANKAVQRGSADNVTVMVVR 389          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.111e-26
Identity = 75/192 (39.06%), Postives = 112/192 (58.33%), Query Frame = -1
Query:  354 IADAYSHTDSEFLKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-----------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVV 881
            ++ A+  TD+ FL++ + + +  +G+TA  AIL G  L+VAN GD RAV+ R G AI +SRDHKP  + ER+RIE +GG V       + G L V+RA GD  ++             ++A+PE+    +    EFLI+  DG+WDV  ++ AV      ++   DP   +K L++EA +R SADN+T VVV
Sbjct:  166 LSSAFLQTDTAFLEACSLDGSLASGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVF---DGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKELVEEALKRKSADNVTAVVV 354          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25
Identity = 73/192 (38.02%), Postives = 108/192 (56.25%), Query Frame = -1
Query:  348 AIADAYSHTDSEFLKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY--------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 884
            A++ A+  TD+ F  + + N +  +G+TA  A++VG  LLVAN GD RAV+C  G AI +SRDHKP    E+ RIE +GG+V       + G L V+RA GD  ++          + A+PE+    +    EFLI+  DG+WDV  ++ AV      ++   DP    K L+ EA +R S DN++ VV+ F
Sbjct:  143 ALSSAFLQTDAAFADACSVNSSLASGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIEASGGYVY---DGYLNGQLNVARAIGDWHMEGMKACDGLGPLSAEPEVMIRNLTEEDEFLIIGCDGIWDVFRSQNAVDFARRKLQEHNDPVTCCKELVDEAIKRKSGDNLSVVVICF 331          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.757e-25
Identity = 67/188 (35.64%), Postives = 107/188 (56.91%), Query Frame = -1
Query:  348 AYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY---------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 872
            ++ H D++F K+       +G+TA TA++ G  LL+AN GD RAV+ R G AI +S DH+P    E+ R+E  GG+V       + G+L V+RA GD  L+           + A+PE++   +    EFLI+ SDG+WDV +N+  V      ++   D +   + +++EA +RG+ DN+T V+V F
Sbjct:  145 SFVHADNQFAKT----TLSSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYV---DDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFARRRLQEHNDVKSCCREIVEEAIKRGATDNLTAVLVSF 325          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.966e-24
Identity = 66/161 (40.99%), Postives = 102/161 (63.35%), Query Frame = -1
Query:  348 AGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 815
            +G+TA+ A+L  G  L+VA+VGDSRA++CR G  + ++ DH P++ DE++RI+  GGFV W   G   V G LA++R+ GD  LK   V+A+PE +  ++  +   FL+L +DG+  +V ++E    +    DP EAA  + ++A Q G+ DN T VVV F
Sbjct:  186 SGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 346          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.966e-24
Identity = 65/161 (40.37%), Postives = 102/161 (63.35%), Query Frame = -1
Query:  348 AGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 815
            +G+TA+ A+L  G  L++A+VGDSRA++CR G  + ++ DH P++ DE++RI+  GGFV W   G   V G LA++R+ GD  LK   V+A+PE +  ++  +   FL+L +DG+  +V ++E    +    DP EAA  + ++A Q G+ DN T VVV F
Sbjct:  186 SGTTATVALLRDGIELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNTTAVVVPF 346          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.568e-24
Identity = 66/160 (41.25%), Postives = 103/160 (64.38%), Query Frame = -1
Query:  348 GSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLE-FLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 812
            G+TA+ A+L  G  L+VA+VGDSRA++CR G    ++ DH P++ +E+ RI+ +GGFV W   G   V G LA++R+ GD  LK   V+A+PE +   +  + + FL+L +DG+  +V ++E   +I    DP+EAA+ L ++A Q G+ DN T +VV F
Sbjct:  188 GTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTEDNSTAIVVPF 347          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1K_MOUSE (Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.568e-24
Identity = 66/161 (40.99%), Postives = 102/161 (63.35%), Query Frame = -1
Query:  348 AGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 815
            +G+TA+ A+L  G  L+VA+VGDSRA++CR G  + ++ DH P++ DE++RI+  GGFV W   G   V G LA++R+ GD  LK   V+A+PE    ++  +   FL+L +DG+  +V ++E    +    DP+EAA  + ++A Q G+ DN T VVV F
Sbjct:  186 SGTTATVALLRDGVELVVASVGDSRALLCRKGKPMKLTTDHTPERKDEKERIKKFGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKASGVIAEPETTRIKLYHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPKEAAHSVTEQAIQYGTEDNSTAVVVPF 346          
The following BLAST results are available for this feature:
BLAST of CX069514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
P2C27_ORYSJ2.743e-2639.15Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
PPM1F_MOUSE3.583e-2636.26Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE... [more]
ILKAP_HUMAN3.583e-2639.60Integrin-linked kinase-associated serine/threonine... [more]
P2C22_ARATH6.111e-2639.06Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C57_ORYSJ5.174e-2538.02Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
P2C54_ORYSJ6.757e-2535.64Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
PPM1K_HUMAN1.966e-2440.99Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
PPM1K_BOVIN1.966e-2440.37Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
PPM1K_XENLA2.568e-2441.25Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
PPM1K_MOUSE2.568e-2440.99Protein phosphatase 1K, mitochondrial OS=Mus muscu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_11A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069514 ID=CX069514; Name=CX069514; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTCTTTTAGGAAATTGAAACTTTAGAAGTCTTTGCC
AATTCTTTACACATGCATACATACACATTTCTAGCTACATTTCGAGGACC
GAGAACAGATGTTAAACTTCGGACACATCTATTCCAGAGACTGATAATAC
GTAATACACATTAACGGCCGGGGTAAGCTTTTTGTTCATGTTCTATCATT
ACAAAGTACAACGAAACTGTAATTTTTCTATGACTACTAGCTGTAGACCA
CTGAAAGGATGCCCATGTAGAGAACAAAAGCAGAGCGGTGGCTATGAAAG
GATGTTCATGCAGAGCCAGGAAAGGATGAACCACCTTGATTGGCCAAGAA
CCGAACAACGACACAGGTGATGTTGTCTGCGCTGCCTCTCTGATATGCCT
CCTGCATCAGCCTCTTCGCTGCCTCCTCTGGATCCTGGATTGGTTTGATC
ATCGCAACAGCTTCCTCATTTGTGACGACATCCCAAAGTCCATCACTTGC
AAGGATAAGAAACTCAAGGGAGCTGTCAATAACTTCCTCCTGAATTTCGG
GATCAGCAACAACATACTGCTTCAAGAGTCTGTCACCAAATGCGCGAGAA
ACGGCAAGAACTCCTCCCACTCTCCAAGTTCCAGCCCACATCACAAACCC
TCCTGCATCCTCAATCCGTTGACGCTCATCTGTTTGGTCTGGTTTGTGAT
CTCGCGATACGGCAATAGCATTACCGCCCCTGCATATAACAGCTCTGGAG
TCACCCACATTTGCAACAAGTAAGCGATCACCAACAAGGATGGCAGTGGA
AGCAGTAGATCCAGCATCCCTGTTTTGATTGTTTTCTGACTTCAGAAATT
CCGAGTCTGTGTGGCTGTATGCATCAGCTATTGC
back to top