CX069514

Overview
NameCX069514
Unique NameCX069514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7623 contig Csv1_Contig7623:203..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = -1
Query:  348 LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNITCVVVRF 845
            ++ +     D+G+TA  A++ G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E V  I  K  Q  E    RL+    +                  DN+TC+++ F
Sbjct:  318 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 506          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = -1
Query:  348 LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNITCVVVRF 845
            ++ +     D+G+TA  A++ G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E V  I  K  Q  E    RL+    +                  DN+TC+++ F
Sbjct:  317 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 505          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 65/203 (32.02%), Postives = 102/203 (50.25%), Query Frame = -1
Query:  312 LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNITCVVVRFLANQGGSSFPGS 845
            ++ +     D+G+TA  A++ G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E +  I  K  Q  E    RL+    +                  DN+TC+++ F      +  P S
Sbjct:  315 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFKPRNTAAPQPES 515          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 67/180 (37.22%), Postives = 96/180 (53.33%), Query Frame = -1
Query:  348 FLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 848
            F    N  +R +GSTA   ++    +   N GDSRAV+CR G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF++LA DG+WDV++NEE      + ++   D E     ++     +GS DN++ V+V F
Sbjct:  120 FSDLRNGMDR-SGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCF 295          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 60/174 (34.48%), Postives = 103/174 (59.20%), Query Frame = -1
Query:  348 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----KPIQDPEEAAKRLMQEAYQRGSA-----DNITCVVVRF 815
            AG TA+ A++VG  L VAN GDSR+ + R G    +S+DHKPD   E++RIE AGGFV      RV G L++SRA GD   K         Q + A P+++   + ++ +FL++  DG+++   +++ +  I    K  Q+ ++AA++L+ +   + ++     DN+TC++++F
Sbjct:  124 AGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIERAGGFV---SDGRVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVFETWDHQQILNFINSELKNTQNLQKAAEKLLDQLLAKDTSLGTGCDNMTCILIQF 294          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PP2C2_SCHPO (Protein phosphatase 2C homolog 2 OS=Schizosaccharomyces pombe GN=ptc2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = -1
Query:  333 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLV-ANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLL---------KQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGS------ADNITCVVVRFLANQG 884
            A+   +   D+  ++  + Q   +G TA+TA++V  +++  AN GDSR V+ R G A  +S DHKP+   E+ RI  AGGF+ +    RV G LA+SRA GD            KQ V A P++    ID   EFLILA DG+WD  ++++ V  ++      Q  E   + LM       S       DN+T  +V FL  +G
Sbjct:   96 ALKSGFLAADNALMQDRDMQEDPSGCTATTALIVDHQVIYCANAGDSRTVLGRKGTAEPLSFDHKPNNDVEKARITAAGGFIDFG---RVNGSLALSRAIGDFEYKKDSSLPPEKQIVTAFPDVVIHNIDPDDEFLILACDGIWDCKSSQQVVEFVRRGIVARQSLEVICENLMDRCIASNSESCGIGCDNMTICIVAFLHGRG 296          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = -1
Query:  348 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------RLL---KQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSA---------DNITCVVVRF 812
            GSTA  AI+   +L+VAN GDSR VI R G A  +SRDHKP+   ER+RI  AGG++      RV G + +SRA GD      + L   KQ + A+P+I    +    +FL+LA DG+WD +++++ V  I    + E +   + +    R  A         DN+T ++V+F
Sbjct:  160 GSTACVAIVRNSQLVVANAGDSRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQMG---RVNGTINLSRAIGDIEFKQNKFLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHINTESSLSAVCERVLDRCLAPSTLGGEGCDNMTMILVQF 329          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: SPNA_DICDI (Protein spalten OS=Dictyostelium discoideum GN=spnA PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 70/196 (35.71%), Postives = 103/196 (52.55%), Query Frame = -1
Query:  354 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGG-----------NAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ----YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAM----IKPIQDPEEAAKRLMQEAYQRGSADNITCVVV 884
            A  DAY+  D   ++    +   +GST  +A+LVG++L  ANVGDS  V+ R               + +S  H      E++R+ D GG +++    R+ G LAVSR+FGD+  K+    + V+DP      + +   F ILA DGLWD V  +EAV      IK  +   E ++ L Q++Y RGS DNIT +VV
Sbjct:  782 AFRDAYAEADDIVIE----KCEKSGSTGVSALLVGNKLYTANVGDSEIVLARAQPNANPKGPVTYEPVLLSYKHLASDDQEKKRVTDLGGMIIFN---RLFGSLAVSRSFGDKEYKEGEKKFCVSDPYQTTTDLTARDHFFILACDGLWDKVEYDEAVQFVQRNIKLGKSATEISELLAQDSYDRGSGDNITVLVV 970          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 68/180 (37.78%), Postives = 94/180 (52.22%), Query Frame = -1
Query:  348 FLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 848
            F    N  +R +GSTA   ++    +   N GDSRAV+ R G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF+ILA DG+WDV++NEE    +K       D E     ++     +GS DN++ V+V F
Sbjct:  120 FSDLRNGMDR-SGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCF 295          
BLAST of CX069514 vs. ExPASy Swiss-Prot
Match: P2C73_ARATH (Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana GN=PPC6-7 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 66/187 (35.29%), Postives = 107/187 (57.22%), Query Frame = -1
Query:  324 AGSTASTAILVGDRLLVANVGDSRAVICRGGN-----AIAVSRDHKPDQTDERQRI-----------EDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAY------QRGSADNITCVVVRFLANQGGSS 815
            +G+TA T +  G+ + VANVGDSRAV+    +     A+ ++ D KP+   E++RI           ++ G   +W       G LA+SRAFGD  +K+Y +V+ PE+ +  I +   F+ILASDG+WDV++N+EA+ ++    +  +AAKRL+++A       +RG + +   VV  FL +   SS
Sbjct:  176 SGTTALTIVRQGEVIYVANVGDSRAVLAMESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFCLDDEPGVHRVWQPDAETPG-LAMSRAFGDYCIKEYGLVSVPEVTQRHISTKDHFIILASDGIWDVISNQEAIEIVSSTAERPKAAKRLVEQAVRAWKKKRRGYSMDDMSVVCLFLHSSSSSS 361          
The following BLAST results are available for this feature:
BLAST of CX069514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
PPM1G_MACFA3.470e-2133.51Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN3.470e-2133.51Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_BOVIN3.470e-2132.02Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
PPM1B_RAT3.470e-2137.22Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
PP2C6_PARTE4.532e-2134.48Probable protein phosphatase 2C 6 OS=Paramecium te... [more]
PP2C2_SCHPO5.919e-2134.80Protein phosphatase 2C homolog 2 OS=Schizosaccharo... [more]
P2C58_ORYSJ5.919e-2136.99Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
SPNA_DICDI7.731e-2135.71Protein spalten OS=Dictyostelium discoideum GN=spn... [more]
PPM1B_BOVIN7.731e-2137.78Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
P2C73_ARATH7.731e-2135.29Probable protein phosphatase 2C 73 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_11A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069514 ID=CX069514; Name=CX069514; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTCTTTTAGGAAATTGAAACTTTAGAAGTCTTTGCC
AATTCTTTACACATGCATACATACACATTTCTAGCTACATTTCGAGGACC
GAGAACAGATGTTAAACTTCGGACACATCTATTCCAGAGACTGATAATAC
GTAATACACATTAACGGCCGGGGTAAGCTTTTTGTTCATGTTCTATCATT
ACAAAGTACAACGAAACTGTAATTTTTCTATGACTACTAGCTGTAGACCA
CTGAAAGGATGCCCATGTAGAGAACAAAAGCAGAGCGGTGGCTATGAAAG
GATGTTCATGCAGAGCCAGGAAAGGATGAACCACCTTGATTGGCCAAGAA
CCGAACAACGACACAGGTGATGTTGTCTGCGCTGCCTCTCTGATATGCCT
CCTGCATCAGCCTCTTCGCTGCCTCCTCTGGATCCTGGATTGGTTTGATC
ATCGCAACAGCTTCCTCATTTGTGACGACATCCCAAAGTCCATCACTTGC
AAGGATAAGAAACTCAAGGGAGCTGTCAATAACTTCCTCCTGAATTTCGG
GATCAGCAACAACATACTGCTTCAAGAGTCTGTCACCAAATGCGCGAGAA
ACGGCAAGAACTCCTCCCACTCTCCAAGTTCCAGCCCACATCACAAACCC
TCCTGCATCCTCAATCCGTTGACGCTCATCTGTTTGGTCTGGTTTGTGAT
CTCGCGATACGGCAATAGCATTACCGCCCCTGCATATAACAGCTCTGGAG
TCACCCACATTTGCAACAAGTAAGCGATCACCAACAAGGATGGCAGTGGA
AGCAGTAGATCCAGCATCCCTGTTTTGATTGTTTTCTGACTTCAGAAATT
CCGAGTCTGTGTGGCTGTATGCATCAGCTATTGC
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