CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PROMP (Phosphoglycerate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=pgk PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 7.954e-73
Identity = 144/203 (70.94%), Postives = 165/203 (81.28%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            GSKVS+KI V++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+LA +L  KAK+KGV LLLP+DV++A++F+ DA SKV    AI   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL DA
Sbjct:  200 GSKVSSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEAKAKNKGVELLLPSDVLLANEFSPDAESKVSQIDAISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNAIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALKDA 402          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.365e-71
Identity = 140/202 (69.31%), Postives = 164/202 (81.19%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVS+KI V++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+LA +L EKAK+KGV LLLP+DVV+A++F+  A SKV    +I   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT +IA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV AL++
Sbjct:  200 GSKVSSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEEKAKTKGVELLLPSDVVLANEFSPTAESKVSQIDSISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNSIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKNLPGVAALNE 401          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_DEIRA (Phosphoglycerate kinase OS=Deinococcus radiodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.716e-67
Identity = 128/199 (64.32%), Postives = 159/199 (79.90%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI+VIE+LL KVD +L+GGGM+FTF KA+G  +G+SLVE+D+LDLA  L+EK   K   LLLPTD V ADKFAADA SKVVPA  IPDGWMGLD+GPD  +++++AL   KT+ WNGPMGVFEFD+FAAGT A+A  +  L  +   T++GGGDSV+A+ K G AD++ HISTGGGASLELLEGK LPGV+A+
Sbjct:  216 GAKVSDKIKVIENLLPKVDRMLIGGGMMFTFIKARGGQIGNSLVEDDQLDLAKGLLEKYGDK---LLLPTDAVAADKFAADAQSKVVPADQIPDGWMGLDIGPDTQRAYADALQGAKTVFWNGPMGVFEFDQFAAGTNAVAAAVGSLKDQAY-TVVGGGDSVSAINKSGKADQIDHISTGGGASLELLEGKELPGVVAM 410          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CHLT3 (Phosphoglycerate kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.994e-67
Identity = 120/202 (59.41%), Postives = 157/202 (77.72%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+K+S KI V+E+LL KVD +L+GG M+FTF+KAQG+++G SLVE+DKL+LA S++EKAK+ GV  LLPTDVV+ADKF  DAN+K+    +I D WMGLD+GP+    F E +   KT+IWNGPMGVFE +KFA GT A+A+ LA+ + +G  T+IGGGDS AA+   GL D ++H+STGGGASLE LEGK LPG+ AL +A
Sbjct:  196 GAKISGKIDVLENLLGKVDTVLVGGAMVFTFFKAQGYNIGKSLVEDDKLELAKSILEKAKTSGVKFLLPTDVVLADKFDQDANTKIATIDSIEDDWMGLDIGPETANCFREEVVNAKTVIWNGPMGVFEMEKFAKGTMAVAQALADATKQGAITVIGGGDSAAAIAVAGLEDSVTHVSTGGGASLEFLEGKELPGIAALSNA 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.522e-67
Identity = 125/201 (62.19%), Postives = 156/201 (77.61%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VIE+LL KVD L++GGGM  TF KAQG+ +G+SL E+DKLDLA +LME+AK +GV LL+P DVV+AD+FAADA  +VV   AIP+GWM LD+GP  ++ +   +  +KT++WNGPMGVFE D FA GT  +AK +A  SG   TTIIGGGDSVAAVEK G+A++M+HISTGGGASLE +EGK LPGV  L D
Sbjct:  195 GAKVKDKIAVIENLLTKVDHLIIGGGMANTFLKAQGYGIGASLCEDDKLDLARTLMEQAKERGVQLLMPVDVVVADRFAADAEKQVVAIDAIPEGWMALDIGPKTVEQYHSVIVDSKTVVWNGPMGVFEMDAFAGGTIGVAKAMAACSG---TTIIGGGDSVAAVEKAGVAEQMTHISTGGGASLEFMEGKELPGVAVLAD 392          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.521e-66
Identity = 122/201 (60.70%), Postives = 161/201 (80.10%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+K+S KI V+ESL EKVD +L+GG M+FTF+KAQG  VG+SLVEE+KL+LA SL+EKAK+K V LLLP DVV+A + +ADA S+V P +AI  G +GLD+GP  I+++ + +   KT++WNGPMGVFE D+FA GT A+A+ LA+ + +G  TIIGGGDS AA+ K GL+DK++H+STGGGASLE LEGK LPG+ AL+D
Sbjct:  197 GAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLVEENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPATIETYRKEILDAKTVLWNGPMGVFEIDQFARGTFAVAQALADATAEGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACLD (Phosphoglycerate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pgk PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 9.418e-66
Identity = 121/201 (60.20%), Postives = 155/201 (77.11%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VIESLLEKVD L++GGG+ +TF KA GH VG SL+EEDK++LA S M++AK KGV+  +PTDV++AD F+ DAN+K+VP + IP  W  LD+G +  K++++ +  +K ++WNGPMGVFE D FA GT A+A+ LAE       ++IGGGDS AAVEK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  195 GAKVKDKIGVIESLLEKVDNLIIGGGLAYTFVKALGHEVGKSLLEEDKIELAKSFMDRAKEKGVNFYMPTDVLVADDFSNDANTKIVPVSEIPSDWEALDIGEETRKTYADVIKNSKLVVWNGPMGVFEIDAFAKGTRAVAEALAE--ANDTYSVIGGGDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVKALND 393          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_ROSCS (Phosphoglycerate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgk PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.098e-65
Identity = 126/202 (62.38%), Postives = 155/202 (76.73%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+K+S KI VIE+LL KVD LL+GGGM  TF  AQGH +G SLVE D   +A SL+++A  +GV L+LPTDVVIAD F+ADAN KVVP   IP GW  LD+GP+ I++++E +   +T+IWNGPMGVFE   FA GT AIA+ +A   G    TIIGGGDSVAA+E++GLADK+ HISTGGGASLELLEG+ LPGV AL+DA
Sbjct:  197 GAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGHEMGDSLVEPDSAPIAKSLLDQAAQRGVRLMLPTDVVIADAFSADANRKVVPVGEIPPGWRALDIGPETIRAYTEVITGAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPG---MTIIGGGDSVAAIEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACST (Phosphoglycerate kinase OS=Bacillus stearothermophilus GN=pgk PE=1 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 2.098e-65
Identity = 124/201 (61.69%), Postives = 153/201 (76.12%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK++LA S MEKAK KGV   +P DVV+AD+FA DAN+KVVP  AIP  W  LD+GP   + + + +  +K ++WNGPMGVFE D FA GT+AIA+ LAE       ++IGGGDS AAVEK GLADKM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  195 GAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAE--ALDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALED 393          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CHLP8 (Phosphoglycerate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=pgk PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.105e-65
Identity = 119/201 (59.20%), Postives = 159/201 (79.10%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+K+S KI V+E L +KVD +L+GG M+FTF+KAQG  VG+SLVE++K++LA SL+EKAK KGV L+LP DVV+A + +ADA S+V P T I DG  GLD+GP  I+++++ +   KT++WNGPMGVFE D+FA GT A+A+ LA+ +  G  TIIGGGDS AA+ K GL+DK++H+STGGGASLE LEGK LPG+ AL+D
Sbjct:  197 GAKISGKIDVLEHLFDKVDTVLVGGAMVFTFFKAQGLPVGNSLVEDNKIELAISLLEKAKEKGVRLILPEDVVVAAEISADAASRVEPVTTISDGMSGLDIGPATIETYAKEILGAKTVLWNGPMGVFEIDQFAKGTFAVAQALADATDAGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND 397          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMP7.954e-7370.94Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM54.365e-7169.31Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_DEIRA1.716e-6764.32Phosphoglycerate kinase OS=Deinococcus radiodurans... [more]
PGK_CHLT34.994e-6759.41Phosphoglycerate kinase OS=Chloroherpeton thalassi... [more]
PGK_BREBN6.522e-6762.19Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]
PGK_CHLTE5.521e-6660.70Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_BACLD9.418e-6660.20Phosphoglycerate kinase OS=Bacillus licheniformis ... [more]
PGK_ROSCS2.098e-6562.38Phosphoglycerate kinase OS=Roseiflexus castenholzi... [more]
PGK_BACST2.098e-6561.69Phosphoglycerate kinase OS=Bacillus stearothermoph... [more]
PGK_CHLP86.105e-6559.20Phosphoglycerate kinase OS=Chlorobaculum parvum (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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