CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PSEF5 (Phosphoglycerate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.948e-43
Identity = 95/200 (47.50%), Postives = 132/200 (66.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ SL +  D L++GGG+  TF  A GH VG SL E D LD A ++  K     VS+ LP DVV+A +FA  A + V     + D  M LD+GP     F+E L +++TI+WNGP+GVFEFD+F  GT+ +A+ +A+       +I GGGD++AA++K G+A ++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  191 GSKVSTKLDVLNSLSQICDQLIVGGGIANTFLAAAGHPVGKSLYEPDLLDTARAIAAK-----VSVPLPVDVVVAKEFAESAAATVKLIADVADDDMILDIGPQTAAQFAELLKSSRTILWNGPVGVFEFDQFGNGTKVLAQAIAD---SAAFSIAGGGDTLAAIDKYGVAQQISYISTGGGAFLEFVEGKVLPAVEVLE 382          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_HELHP (Phosphoglycerate kinase OS=Helicobacter hepaticus GN=pgk PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.948e-43
Identity = 90/200 (45.00%), Postives = 131/200 (65.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS+K+ ++ ++L+ VD +++GG M  TF KA+G  +  SLVE+D +  A  +++KAK K V + LP DVV  D      + K+ PA  IP+G+M +D+GP   K FSE +  ++TIIWNGP+G++E   F+ GT  +A  +++       ++IGGGD+  A++K G  D MS ISTGGGASLELLEGK LP    L+
Sbjct:  204 GSKVSSKLALLYNILDVVDKIIIGGAMSNTFLKARGFDMQKSLVEDDLVSEARKILDKAKEKKVKIYLPVDVVSTDDIKEHRHIKITPAQDIPEGFMAVDMGPATSKLFSEVVRDSQTIIWNGPLGIYEIQAFSRGTFNLAHAVSDTY---AFSLIGGGDTADAIDKAGERDNMSFISTGGGASLELLEGKILPAFEVLE 400          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PSEPK (Phosphoglycerate kinase OS=Pseudomonas putida (strain KT2440) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 94/201 (46.77%), Postives = 132/201 (65.67%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ SL    D L++GGG+  TF  A GH VG SL E D +D A ++  K     VS+ LP DVV+A +FA  A + V     +    M LD+GP    +F+E L ++KTI+WNGP+GVFEFD+F  GT+ +AK +A+       +I GGGD++AA++K G++ ++S+ISTGGGA LE +EGK LP V  L++
Sbjct:  191 GSKVSTKLDVLNSLSSVCDQLIVGGGIANTFLAAAGHPVGKSLYEPDLVDTAKAIAAK-----VSVPLPVDVVVAKEFAESAEATVKAIADVAADDMILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGNGTKVLAKAIAD---SAAFSIAGGGDTLAAIDKYGVSKEISYISTGGGAFLEFVEGKVLPAVAILEE 383          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PSEAE (Phosphoglycerate kinase OS=Pseudomonas aeruginosa GN=pgk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 94/200 (47.00%), Postives = 129/200 (64.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ SL    D L++GGG+  TF  A GH VG SL E D ++ A ++  K K     + LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  191 GSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAAAGHKVGKSLYEADLVETAKAIAAKVK-----VPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PSEAB (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 94/200 (47.00%), Postives = 129/200 (64.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ SL    D L++GGG+  TF  A GH VG SL E D ++ A ++  K K     + LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  191 GSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAAAGHKVGKSLYEADLVETAKAIAAKVK-----VPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PSEA8 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 94/200 (47.00%), Postives = 129/200 (64.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ SL    D L++GGG+  TF  A GH VG SL E D ++ A ++  K K     + LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  191 GSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAAAGHKVGKSLYEADLVETAKAIAAKVK-----VPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_METFK (Phosphoglycerate kinase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 92/200 (46.00%), Postives = 130/200 (65.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL EKVD L++GGG+  TF KA G  +G SL E+D +  A  LMEK   +G ++ +  DVV   +F A+  + +  A  + D  M  D+GP++ K  +E +    T++WNGP+GVFEFD+F  GT+ IA  +A+       T+ GGGD++AA++K  + DK+S+IST GGA LE LEGK LP V  L+
Sbjct:  192 GSKVSTKLTVLESLAEKVDQLVVGGGIANTFLKAAGKPIGRSLSEDDLVPTAQCLMEKMAKRGAAVPIAVDVVCGKQFDANEPAVLKSAEDVADDDMIFDIGPESAKQLAEIILNAGTVVWNGPVGVFEFDQFGEGTKTIADAIAKTK---AFTLAGGGDTIAAIQKYDIYDKVSYISTAGGAFLEFLEGKKLPAVEILE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_LARHH (Phosphoglycerate kinase OS=Laribacter hongkongensis (strain HLHK9) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 88/199 (44.22%), Postives = 135/199 (67.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ ++E+L +KVD L++GGG+  TF  A+G ++G SL E D +  A  ++EK ++ G ++ LPTDVV+A +F+ +A   +     +    M LD+GPD+ +  +E +    T++WNGP+GVFEF++F+ GT  +A+ +AE       +I GGGD+++A+ K G+ D++S+ISTGGGA LE LEGK LP V  L
Sbjct:  191 GSKVSTKLTILEALADKVDQLIVGGGIANTFLLAEGKNIGKSLAEADLVGEAKKVIEKIRAHGGNVPLPTDVVVAPEFSENAEDTLKNVADVTRDDMILDIGPDSARVLAEIVAKAGTVVWNGPVGVFEFEQFSHGTRTLAEAIAE---SKAFSIAGGGDTLSAIAKFGVTDRISYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_DIAST (Phosphoglycerate kinase OS=Diaphorobacter sp. (strain TPSY) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 91/194 (46.91%), Postives = 132/194 (68.04%), Query Frame = -2
Query:  250 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLP 831
            GSKVSTK+ +++SL + VD L++GGG+  TF  A G  +G SL E D ++ A +++    ++G  + +PTDVV+A  FAADA + V  A+ + +  + LD+GP+     +  L    TI+WNGP+GVFEFD+FA GT+AIA+ +AE S     +I GGGD++AA+ K G+   + +ISTGGGA LE+LEGKTLP
Sbjct:  196 GSKVSTKLTILQSLSKNVDGLVVGGGIANTFMLAAGLPIGKSLAEPDLVNEAKAVIAAMAARGAEVPIPTDVVVAKAFAADAPATVKKASEVAEDDLILDIGPETAAKLAAQLKAAGTIVWNGPVGVFEFDQFAGGTKAIAQAIAESS---AFSIAGGGDTLAAIAKYGIEKDVGYISTGGGAFLEVLEGKTLP 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RHOFD (Phosphoglycerate kinase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=pgk PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.029e-43
Identity = 93/194 (47.94%), Postives = 129/194 (66.49%), Query Frame = -2
Query:  250 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLP 831
            GSKVSTK+ +++SL  KVD L++GGG+  TF  A G  +G SL E D L+ A +++   K++G ++ +PTDVV A  FAADA + V  AT + D  + LD+GP    + +  L    TI+WNGP+GVFEF  F  GT+ IA  +AE S     +I GGGD++AA+ K G+  ++ +ISTGGGA LE+LEGKTLP
Sbjct:  196 GSKVSTKLTILKSLASKVDQLIVGGGIANTFMLAAGLKIGKSLAEPDLLEDARAVIAAMKARGAAVPIPTDVVTAKTFAADAVATVKAATDVADDDLILDIGPQTAAALATQLKAAGTIVWNGPVGVFEFPAFENGTQTIAHAIAESS---AFSIAGGGDTLAAIAKYGIEKQIGYISTGGGAFLEVLEGKTLP 386          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PSEF52.948e-4347.50Phosphoglycerate kinase OS=Pseudomonas fluorescens... [more]
PGK_HELHP2.948e-4345.00Phosphoglycerate kinase OS=Helicobacter hepaticus ... [more]
PGK_PSEPK3.850e-4346.77Phosphoglycerate kinase OS=Pseudomonas putida (str... [more]
PGK_PSEAE3.850e-4347.00Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEAB3.850e-4347.00Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEA83.850e-4347.00Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_METFK3.850e-4346.00Phosphoglycerate kinase OS=Methylobacillus flagell... [more]
PGK_LARHH3.850e-4344.22Phosphoglycerate kinase OS=Laribacter hongkongensi... [more]
PGK_DIAST3.850e-4346.91Phosphoglycerate kinase OS=Diaphorobacter sp. (str... [more]
PGK_RHOFD5.029e-4347.94Phosphoglycerate kinase OS=Rhodoferax ferrireducen... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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