CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOBJ (Phosphoglycerate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=pgk PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.401e-61
Identity = 117/201 (58.21%), Postives = 152/201 (75.62%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++ +  +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  200 GAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOBH (Phosphoglycerate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.135e-61
Identity = 116/201 (57.71%), Postives = 152/201 (75.62%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++ +  +++KAK KGV+LLLP D V+ADKF  DA+  +     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  200 GAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOB1 (Phosphoglycerate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.135e-61
Identity = 116/201 (57.71%), Postives = 152/201 (75.62%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++ +  +++KAK KGV+LLLP D V+ADKF  DA+  +     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  200 GAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CHLPD (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=pgk PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.348e-61
Identity = 112/201 (55.72%), Postives = 153/201 (76.12%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSK+S KI V+E+L  KVD +L+GG M+FTF+KAQG +VG+SLVE++KLDLA +L+++A  KG++LLLP DV++A   ++DA+S V    ++ DG +G+D+GP  I+ +   +   +T++WNGPMGVFE D FA GT AIAK LAE +  G  TI+GGGDS AA+ K  L+D ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  197 GSKISGKIDVLENLFTKVDTVLIGGAMVFTFFKAQGLNVGNSLVEDNKLDLAQALLKQAADKGINLLLPDDVLVAATISSDASSHVEAVNSMSDGMIGVDIGPKTIEKYRNEILAARTVLWNGPMGVFEIDNFAEGTFAIAKALAEATSSGAITIVGGGDSAAAIAKAALSDSITHISTGGGASLEFLEGKALPGIEALND 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_OCEIH (Phosphoglycerate kinase OS=Oceanobacillus iheyensis GN=pgk PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.122e-61
Identity = 112/201 (55.72%), Postives = 148/201 (73.63%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI++LL+KVD L++GGG+ +TF KAQGH +G SL+EEDK+DLA   M KAK KGV+ +LP D ++AD F+ +AN+K+V    IP  W  LD+G    + +S  +  +K +IWNGPMGVFE + FA GT+A+A+ LA   G    +IIGGGDS AAVEK GLA++M H+STGGGASLE +EGK LPG+ AL+D
Sbjct:  195 GAKVKDKISVIDNLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEEDKIDLAKEFMNKAKEKGVNFVLPVDAIVADDFSEEANTKIVDIDKIPSDWEALDIGTKTREKYSSIVKDSKLVIWNGPMGVFELNAFAGGTKAVAEALASTEG---YSIIGGGDSAAAVEKFGLAEEMDHVSTGGGASLEFMEGKVLPGLAALND 392          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CLOB6 (Phosphoglycerate kinase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=pgk PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.122e-61
Identity = 116/201 (57.71%), Postives = 151/201 (75.12%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++ +  +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  D M+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  200 GAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDNMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PROVI (Phosphoglycerate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=pgk PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.556e-60
Identity = 116/201 (57.71%), Postives = 151/201 (75.12%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSK+S KI V+E+L +KVD +L+GG M+FTF+KA G   GSSLVE++KL+LA SL+E+AK++ + LLLP DV+ A + +ADA    V    +  G MGLD+GP  I+++ + +   +TI+WNGPMGVFE D FA GT A+A+ +A  + KG TTIIGGGDS AAV K GLA KM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  197 GSKISGKIDVLENLFKKVDTVLIGGAMVFTFFKAMGLETGSSLVEDNKLELALSLLEQAKNRNIKLLLPQDVIAAPELSADAPFHAVSVKELEAGEMGLDIGPLTIEAYRQEILGARTILWNGPMGVFEIDSFANGTFAVAEAMALATAKGATTIIGGGDSAAAVAKAGLASKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PELTS (Phosphoglycerate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pgk PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.556e-60
Identity = 120/201 (59.70%), Postives = 149/201 (74.13%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVS K+ VI +LL KVD +++GGGM  TF KAQG+SVG SL+E DK+DLA  L+ +A+S+ V LLLP DVV+A   A     + VP   IP  WM LD+GP++I+ F+EAL   +T++WNGPMGVFE D FA GTEAIA+ LAEL+     T+IGGGD+ AA +K G+A KM+HISTGGGASLE LEGK LPGV AL D
Sbjct:  195 GSKVSDKLGVIFNLLTKVDTVIIGGGMANTFLKAQGYSVGKSLLEADKIDLARKLIAEARSREVKLLLPVDVVVAPGPAPGQEQRTVPVDQIPAEWMALDIGPESIRLFTEALRAARTVVWNGPMGVFEMDPFARGTEAIARTLAELN---AVTVIGGGDTAAAAKKAGVAGKMTHISTGGGASLEFLEGKQLPGVRALLD 392          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_NOCFA (Phosphoglycerate kinase OS=Nocardia farcinica GN=pgk PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.032e-60
Identity = 117/202 (57.92%), Postives = 146/202 (72.28%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVS K+ VIE+L  KVD L++GGGM FTF  AQG SVGSSL++E+ +D    L+E+       + LP DVV+AD F+ADA SK VPA  IPDGWMGLD+G +++  F+  L   KT+ WNGPMGVFEF+KFAAGT  +A+ +   +GKG  T++GGGDS AAV  +GL  D  SHISTGGGASLE LEGK LPG+  L+D
Sbjct:  206 GSKVSDKLAVIEALAPKVDTLVIGGGMCFTFLAAQGLSVGSSLLQEEMIDTCKGLLERYADV---IHLPRDVVVADSFSADAESKCVPANEIPDGWMGLDIGAESVDRFAALLTEAKTVFWNGPMGVFEFEKFAAGTRGVAEAIVAATGKGAFTVVGGGDSAAAVRALGLPEDGFSHISTGGGASLEYLEGKELPGISVLED 404          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_THEAB (Phosphoglycerate kinase OS=Thermosipho africanus (strain TCF52B) GN=pgk PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.654e-60
Identity = 111/200 (55.50%), Postives = 148/200 (74.00%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI VI +LL+K D +L+GG M+FTF K+ G++VGSSLVE+DKLDLA  ++E+AK KG  ++LP D V A K  A   +K +     +P+GWMGLD+GP  ++ F  ++   KTI+WNGPMGVFE + F+ GT+ +A  +AE + KG TTIIGGGDS AA+ K GL DK+SH+STGGGASLE LEGK LPG+ ++
Sbjct:  195 GAKVSDKIGVITNLLDKADKILIGGAMMFTFLKSLGYNVGSSLVEDDKLDLAKRILEQAKEKGTEIVLPVDTVCAQKIEAGVETKTIDIKDGLPEGWMGLDIGPKTVELFRNSISGAKTIVWNGPMGVFEIEDFSNGTKEVAIAIAEETSKGATTIIGGGDSAAAIAKFGLKDKVSHVSTGGGASLEFLEGKELPGIASI 394          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOBJ2.401e-6158.21Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBH3.135e-6157.71Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB13.135e-6157.71Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CHLPD5.348e-6155.72Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_OCEIH9.122e-6155.72Phosphoglycerate kinase OS=Oceanobacillus iheyensi... [more]
PGK_CLOB69.122e-6157.71Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_PROVI1.556e-6057.71Phosphoglycerate kinase OS=Prosthecochloris vibrio... [more]
PGK_PELTS1.556e-6059.70Phosphoglycerate kinase OS=Pelotomaculum thermopro... [more]
PGK_NOCFA2.032e-6057.92Phosphoglycerate kinase OS=Nocardia farcinica GN=p... [more]
PGK_THEAB2.654e-6055.50Phosphoglycerate kinase OS=Thermosipho africanus (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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