CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_GEOSF (Phosphoglycerate kinase OS=Geobacter sp. (strain FRC-32) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.466e-60
Identity = 118/202 (58.42%), Postives = 149/202 (73.76%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+KVS K+ V+E+L+ KVDI+++GGGM FTF KA+G SVG SLVE+D +D A  +++ A  +G+  LLP D V+AD+FAADA+ K V    IP  WM LDVGP +   FS+AL    T+IWNGPMGVFE D+FA GT AIA  +A L  K  TTIIGGGD+ +AV K G+ADK+S+ISTGGGA LELLEGK LPGV  L+ +
Sbjct:  198 GAKVSGKLEVLETLVGKVDIIIIGGGMAFTFLKARGLSVGKSLVEDDLIDTAKRILDNAAKRGIEFLLPEDCVVADRFAADADCKTVSVNDIPSEWMALDVGPASTARFSDALKEANTVIWNGPMGVFEMDRFAKGTFAIADVVAGL--KNATTIIGGGDTDSAVRKAGVADKVSYISTGGGAFLELLEGKKLPGVEVLEQS 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BEUC1 (Phosphoglycerate kinase OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.466e-60
Identity = 114/202 (56.44%), Postives = 150/202 (74.26%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVS K+ VI +LL K D LL+GGGM+FTF  AQGH VG SL+EED++D     +++A+  GV+++LPTD+V A+ FAADA  +VV A AIP   +GLD+GP++ ++F+  +   KT++WNGPMGVFEFD FAAGT A+A+ L + +  G  TI+GGGDS AAV  +G  +   SHISTGGGASLE LEGKTLPG+  L+D
Sbjct:  198 GSKVSDKLGVIANLLTKADTLLIGGGMVFTFLAAQGHQVGKSLLEEDQIDTVKGYLDQAEQSGVTIVLPTDIVAAEAFAADAPHQVVAADAIPADSIGLDIGPESGEAFAAVIRGAKTVVWNGPMGVFEFDAFAAGTRAVAQGLTDATAAGAFTIVGGGDSAAAVRSLGFDEAGFSHISTGGGASLEFLEGKTLPGLAVLED 399          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SYMTH (Phosphoglycerate kinase OS=Symbiobacterium thermophilum GN=pgk PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.527e-60
Identity = 115/199 (57.79%), Postives = 148/199 (74.37%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI VIE+LL KVD L++GGGM  TF +A+G + G SLVEED++D A  L+ K   K   +LLPTD+V+A +F ADA  KVVP  AIP+GWM LD+GP+  ++F++ +    T++WNGPMGVFE + FA GT A+A+ +A+  G    TI+GGGDSVAAVE  GLAD+M+H+STGGGASLE LEGK LPGV  L
Sbjct:  196 GAKVSDKIMVIENLLTKVDRLIIGGGMANTFLRARGFATGKSLVEEDRVDTARELLAKGGDK---ILLPTDLVVASEFKADAEQKVVPVDAIPEGWMALDIGPETARAFADVIRGAHTVVWNGPMGVFEMEPFARGTFAVAQAMADCEG---VTIVGGGDSVAAVEAAGLADRMTHVSTGGGASLEFLEGKELPGVACL 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_LACSS (Phosphoglycerate kinase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.913e-60
Identity = 120/201 (59.70%), Postives = 149/201 (74.13%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VIE LL K D +++GGGM +TFY A+G S+G+SLVEEDK++LA  L+EKA  K   L+LP D V+AD F+ DA ++ V    IPDG+M LD+GP AI  F   L   KT++WNGPMGVFE D FA GT AI + L  LSG   TTI+GGGDS AAV+K+G+ DK++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  209 GAKVSDKIGVIEHLLAKADKVIVGGGMTYTFYAAKGLSIGNSLVEEDKIELAKELIEKAGDK---LVLPVDNVVADAFSNDAKTETVEGN-IPDGYMALDIGPKAIADFENVLKDAKTVVWNGPMGVFEMDNFAKGTLAIGEFLGNLSG--ATTIVGGGDSTAAVKKLGVGDKLTHISTGGGASLEYLEGKTLPGIAAISD 403          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_THELT (Phosphoglycerate kinase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=pgk PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.722e-60
Identity = 117/202 (57.92%), Postives = 143/202 (70.79%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL K D LL+GG M+FTF KAQG  VGSSLVE DKLDLA  ++E+AK K V ++LP D ++A K  A    K       I DGWMGLD+GP  IK F EAL   KT++WNGPMGVFE + FA GT+A+A+ +A++ G   TT+IGGGDS AAV K GL    SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  196 GAKVSDKIGVITNLLNKADKLLIGGAMMFTFLKAQGLKVGSSLVENDKLDLAKQILEQAKEKKVEIVLPVDAIVAQKIEAGVEKKTADLKDGIDDGWMGLDIGPKTIKVFEEALKNAKTVVWNGPMGVFEIEDFAGGTKAVAEMIAKIKG---TTVIGGGDSAAAVAKFGLESAYSHVSTGGGASLEFLEGKDLPGIRSIAD 394          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_ACIC5 (Phosphoglycerate kinase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=pgk PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.722e-60
Identity = 118/202 (58.42%), Postives = 150/202 (74.26%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI+VI++LL KVD LL+GGGM +TF K+QG  VG SLVE DKLD+A + ++KAK KGV  LLP D ++ADKFAADA ++    T A P  WM LD+GP +I+ F++ +    TI+WNGPMGVFE   FA GT A+A+ +A+       +IIGGGDSVAAV++ G+ADK+ HISTGGGASLE LEGK LPGV AL +
Sbjct:  204 GAKVSDKIKVIDNLLNKVDALLIGGGMAYTFLKSQGQDVGKSLVEADKLDIAKAALDKAKEKGVRFLLPVDHILADKFAADAATQTFEGTGAFPAEWMALDIGPKSIELFTKEIAAADTIVWNGPMGVFEMPAFAKGTTAVAQAVAD--NVDAVSIIGGGDSVAAVKQAGVADKIKHISTGGGASLEFLEGKKLPGVEALTE 403          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_THETN (Phosphoglycerate kinase OS=Thermoanaerobacter tengcongensis GN=pgk PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.317e-59
Identity = 113/201 (56.22%), Postives = 151/201 (75.12%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LLEKVD LL+GGGM +TF KA+G+ +G SL+EEDK++LA  +MEKAK KGV+ +LP D VIA +  +    +VV    +P+  +G+D+GP  I+ +S+ +    T++WNGPMGVFE  +FA GT+AIAK L+E  G   TTI+GGGDS AA+E++G ADK++HISTGGGASLE LEGK LPG+  L+D
Sbjct:  196 GAKVSDKIGVITNLLEKVDSLLIGGGMAYTFIKAKGYEIGKSLLEEDKIELAKEIMEKAKQKGVNFMLPVDTVIAKELKSGVPYEVVDIDKMPEDQIGVDIGPKTIEEYSKVIKHAMTVVWNGPMGVFEIPEFAKGTKAIAKALSECKG---TTIVGGGDSAAAIEQLGYADKVTHISTGGGASLEFLEGKVLPGIDILND 393          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RHOSR (Phosphoglycerate kinase OS=Rhodococcus sp. (strain RHA1) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.317e-59
Identity = 114/201 (56.72%), Postives = 148/201 (73.63%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VIE+L  KVD L++GGGM +TF  AQG SVG+SL EE  +D   +L+E+       + +P DVVIAD F+ADA SK+V    IPDGWMGLD+GP +++ F+  L + KT+ WNGPMGVFEF+KFAAGT+ +A+ + E +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  205 GSKVSDKLAVIEALAPKVDTLVIGGGMYYTFLAAQGVSVGNSLCEESMIDTCKALLEQYADV---IHIPQDVVIADSFSADAESKIVSVLEIPDGWMGLDIGPQSVRRFAAILTSAKTVFWNGPMGVFEFEKFAAGTKGVAEAIIEATGKGAYSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIAVLE 402          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RHOOB (Phosphoglycerate kinase OS=Rhodococcus opacus (strain B4) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.317e-59
Identity = 114/201 (56.72%), Postives = 148/201 (73.63%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVS K+ VIE+L  KVD L++GGGM +TF  AQG SVG+SL EE  +D   +L+E+       + +P DVVIAD F+ADA SK+V    IPDGWMGLD+GP +++ F+  L + KT+ WNGPMGVFEF+KFAAGT+ +A+ + E +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  205 GSKVSDKLAVIEALAPKVDTLVIGGGMYYTFLAAQGLSVGNSLCEESMIDTCKALLEQYADV---IHIPQDVVIADSFSADAESKIVSVLEIPDGWMGLDIGPQSVRRFAAILTSAKTVFWNGPMGVFEFEKFAAGTKGVAEAIIEATGKGAYSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIAVLE 402          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PORGI (Phosphoglycerate kinase OS=Porphyromonas gingivalis GN=pgk PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.317e-59
Identity = 109/199 (54.77%), Postives = 149/199 (74.87%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTKI +IE+LL KVD L+L GGM +TF KA G  +G S+VE+DKLDLA  +++KA  KGV+L+L  D  +AD+F  DA ++V     IPD WMG+D+GP +I+ F + +  +KTI+WNGP GVFEFD F+ G++A+ + + E +  G  +++GGGDSVA V K GLADK+S++STGGGA LE +EGKTLPG+ A+
Sbjct:  218 GSKVSTKIEIIENLLNKVDNLILTGGMTYTFTKAAGGRIGLSIVEDDKLDLARDIVKKAAEKGVNLILSVDTKVADRFDNDAATQVCSNMEIPDDWMGMDIGPRSIEKFRKVILESKTILWNGPTGVFEFDNFSIGSKAVGEAIVEATANGAFSLVGGGDSVACVNKFGLADKVSYVSTGGGALLEAIEGKTLPGIAAI 416          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_GEOSF3.466e-6058.42Phosphoglycerate kinase OS=Geobacter sp. (strain F... [more]
PGK_BEUC13.466e-6056.44Phosphoglycerate kinase OS=Beutenbergia cavernae (... [more]
PGK_SYMTH4.527e-6057.79Phosphoglycerate kinase OS=Symbiobacterium thermop... [more]
PGK_LACSS5.913e-6059.70Phosphoglycerate kinase OS=Lactobacillus sakei sub... [more]
PGK_THELT7.722e-6057.92Phosphoglycerate kinase OS=Thermotoga lettingae (s... [more]
PGK_ACIC57.722e-6058.42Phosphoglycerate kinase OS=Acidobacterium capsulat... [more]
PGK_THETN1.317e-5956.22Phosphoglycerate kinase OS=Thermoanaerobacter teng... [more]
PGK_RHOSR1.317e-5956.72Phosphoglycerate kinase OS=Rhodococcus sp. (strain... [more]
PGK_RHOOB1.317e-5956.72Phosphoglycerate kinase OS=Rhodococcus opacus (str... [more]
PGK_PORGI1.317e-5954.77Phosphoglycerate kinase OS=Porphyromonas gingivali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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