CX069370

Overview
NameCX069370
Unique NameCX069370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A2_MOUSE (Solute carrier family 22 member 2 OS=Mus musculus GN=Slc22a2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.959e-12
Identity = 54/178 (30.34%), Postives = 88/178 (49.44%), Query Frame = -1
Query:  242 VLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIF-VSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 772
            +L+TE VG  +R  VGI     FT+G L L  +AY     +W  +    ++P   +  LLY + + ESPRWL  Q +  +A+++IK ++  K+   + +SL S  +   E             +R   +R+     TL LM   F   V+Y G+ + +   G +IYL   ++AL+E P
Sbjct:  223 ILITEFVGLGYRRTVGICYQIAFTVGLLILAGVAYA--LPNWRWLQFAVTLPNFCF--LLYFWCIPESPRWLISQNKNAKAMKIIKHIAK-KNGKSVPVSLQSLTA--DEDTGMKLNPSFLDLVRTPQIRK----HTLILMYNWFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFP 389          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A8_RABIT (Solute carrier family 22 member 8 OS=Oryctolagus cuniculus GN=SLC22A8 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.558e-12
Identity = 51/193 (26.42%), Postives = 92/193 (47.67%), Query Frame = -1
Query:  242 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPI----KDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 808
            G S + I   T++L  E V T+ R +      + +TIG   LP +AY      W  + L  S+P  ++S LL  ++ ES RWL + G+  +A+++++ ++      ++  +LSL  +  +S   + +            R   +RR     TL L +  F  G  YY + +G+E  G +IY+  +    ++IP
Sbjct:  184 GFSISGISLSTVILNVEWVPTKMRAITSTAIGYCYTIGQFILPGLAYA--IPQWRWLQLTVSVPYFIFS-LLSWWIPESIRWLVLAGKSSKALKILRRVATFNGKKEEGEKLSLEELK-LSLQKDISLAKAKYSTADLFRTPILRRV----TLCLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIP 368          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A1_HUMAN (Solute carrier family 22 member 1 OS=Homo sapiens GN=SLC22A1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.558e-12
Identity = 56/180 (31.11%), Postives = 88/180 (48.89%), Query Frame = -1
Query:  242 LLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSP----IKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 769
            L+TE VG+  R  V I+    FT+G + L  +AY      W  + L  S+PT ++  L Y  V ESPRWL  Q R  EA++++  ++     +  ++   LSL   V+    P+             +LF      +RT  LM L F   V+Y G+ L +     ++YL  +++AL+EIP
Sbjct:  223 LITEFVGSGSRRTVAIMYQMAFTVGLVALTGLAYA--LPHWRWLQLAVSLPTFLFL-LYYWCVPESPRWLLSQKRNTEAIKIMDHIAQKNGKLPPADLKMLSLEEDVTEKLSPS-----------FADLFRTPRLRKRTFILMYLWFTDSVLYQGLILHMGATSGNLYLDFLYSALVEIP 388          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A2_RAT (Solute carrier family 22 member 2 OS=Rattus norvegicus GN=Slc22a2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12
Identity = 54/178 (30.34%), Postives = 89/178 (50.00%), Query Frame = -1
Query:  242 VLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIF-VSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 772
            +L+TE VG  +R +VGI     FT+G L L  +AY     +W  +    ++P   +  LLY + + ESPRWL  Q +  +A+++IK ++  K+   + +SL +      E A           +R   +R+     TL LM   F   V+Y G+ + +   G +IYL   ++AL+E P
Sbjct:  223 ILITEFVGLGYRRMVGICYQIAFTVGLLILAGVAYV--IPNWRWLQFAVTLPNFCF--LLYFWCIPESPRWLISQNKIVKAMKIIKHIAK-KNGKSVPVSLQNLTP--DEDAGKKLNPSFLDLVRTPQIRK----HTLILMYNWFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFP 389          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S226A_XENLA (Solute carrier family 22 member 6-A OS=Xenopus laevis GN=slc22a6-A PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.444e-12
Identity = 57/189 (30.16%), Postives = 90/189 (47.62%), Query Frame = -1
Query:  254 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPI--KDSNQLSLSLVSAVS-FGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYL-GVVFNAL 808
            G++ + IG  T  L+ E V T  R + G L  F +T+G L L  +AY  R   W  + L  S+P  ++  L   +  ES RWL + G+ E AV+ +K ++ +  K+     ++L S  S    E A           IR   +RR     + AL ++ F     YYG+ + ++N    IYL  V+F A+
Sbjct:  201 GMALSGIGLNTTALIVEWVPTRVRTITGTLAGFSYTVGQLLLAGLAYAMR--DWRWLQLCVSLPFFIFF-LYSWWFPESARWLVLSGKTERAVKEMKKVAKLNGKEEEGEKITLESMRSDMIKELACAKSSYTVIDLIRTSTIRR----ISCALSLVWFSTSFAYYGLAMDLQNFNVSIYLIQVIFGAV 382          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A1_PIG (Solute carrier family 22 member 1 OS=Sus scrofa GN=SLC22A1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.722e-12
Identity = 51/176 (28.98%), Postives = 85/176 (48.30%), Query Frame = -1
Query:  242 LLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 769
            L+TE VG  +R  V IL    F++G + L  +AY      W  + L  S+P  +   L Y FV ESPRWL  Q R  +A++++  ++  + + +L  + +  +S   E              R   +R++    T  LM L F   V+Y G+ + +   G  +YL  +++AL+E P
Sbjct:  222 LITEFVGLGYRKTVAILYQTAFSVGLVLLSGLAYA--VPHWRSLQLAVSLPIFLLL-LCYWFVPESPRWLLSQKRNTQAIKIMDRIA--QKNGKLPPADLKMLSLEEEVVTERLSPSFLDLFRTQNLRKY----TFILMYLWFTSSVLYQGLIMHVGATGGSLYLDFLYSALVEFP 388          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A2_PONAB (Solute carrier family 22 member 2 OS=Pongo abelii GN=SLC22A2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.166e-11
Identity = 52/177 (29.38%), Postives = 81/177 (45.76%), Query Frame = -1
Query:  242 VLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 772
            +L+TE VG  +R  VGI     +T+G L L  +AY      W  +    ++P   +  L Y  + ESPRWL  Q +  EA+ +IK ++  K+   L  SL        E             +R   +R+     T+ LM   F   V+Y G+ + +   G +IYL   ++AL+E P
Sbjct:  223 ILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYA--LPHWRWLQFTVTLPNFFFL-LYYWCIPESPRWLISQNKNAEAMRIIKHIAK-KNGKSLPASLQCLRL--EEETGEKLNPSFLDLVRTPQIRK----HTMILMYNWFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFP 389          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A2_PIG (Solute carrier family 22 member 2 OS=Sus scrofa GN=SLC22A2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.166e-11
Identity = 53/177 (29.94%), Postives = 80/177 (45.20%), Query Frame = -1
Query:  242 VLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 772
            +L+TE VG  +R  VGI     FT G L L  +AY      W  +    ++P   +    Y  V ESPRWL  Q +  +A+ +IK ++  K+   L  SL S      E             +R   +R+     TL LM   F   V+Y G+ + +   G ++YL   ++AL+E P
Sbjct:  222 ILITEFVGLSYRRTVGIFYQVAFTFGLLVLAGVAYA--LPHWRWLQFTVTLPNFCFL-FYYWCVPESPRWLISQNKNAKAMSIIKHIAK-KNGKSLPASLQSLRP--DEEVGEKLKPSFLDLVRTPQIRK----HTLILMYNWFTSAVLYQGLVMHMGLAGSNLYLDFFYSALVEFP 388          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A2_HUMAN (Solute carrier family 22 member 2 OS=Homo sapiens GN=SLC22A2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.166e-11
Identity = 52/177 (29.38%), Postives = 81/177 (45.76%), Query Frame = -1
Query:  242 VLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 772
            +L+TE VG  +R  VGI     +T+G L L  +AY      W  +    ++P   +  L Y  + ESPRWL  Q +  EA+ +IK ++  K+   L  SL        E             +R   +R+     T+ LM   F   V+Y G+ + +   G +IYL   ++AL+E P
Sbjct:  223 ILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYA--LPHWRWLQFTVALPNFFFL-LYYWCIPESPRWLISQNKNAEAMRIIKHIAK-KNGKSLPASLQRLRL--EEETGKKLNPSFLDLVRTPQIRK----HTMILMYNWFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFP 389          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A1_RABIT (Solute carrier family 22 member 1 OS=Oryctolagus cuniculus GN=SLC22A1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.166e-11
Identity = 53/180 (29.44%), Postives = 88/180 (48.89%), Query Frame = -1
Query:  242 LLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSP----IKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 769
            L+TE VG+ +R  V IL    F++G + L  +AY     +W  + L  S+PT +     Y  V ESPRWL  Q R  +AV+++ +++     +  ++   LSL   V+    P+           + +LF      + T  LM L F   V+Y G+ L +   G ++YL   +++L+E P
Sbjct:  223 LITEFVGSGYRRTVAILYQVAFSVGLVALSGVAYA--IPNWRWLQLTVSLPTFLCL-FYYWCVPESPRWLLSQKRNTDAVKIMDNIAQKNGKLPPADLKMLSLDEDVTEKLSPS-----------LADLFRTPNLRKHTFILMFLWFTCSVLYQGLILHMGATGGNVYLDFFYSSLVEFP 388          
The following BLAST results are available for this feature:
BLAST of CX069370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
S22A2_MOUSE1.959e-1230.34Solute carrier family 22 member 2 OS=Mus musculus ... [more]
S22A8_RABIT2.558e-1226.42Solute carrier family 22 member 8 OS=Oryctolagus c... [more]
S22A1_HUMAN2.558e-1231.11Solute carrier family 22 member 1 OS=Homo sapiens ... [more]
S22A2_RAT3.341e-1230.34Solute carrier family 22 member 2 OS=Rattus norveg... [more]
S226A_XENLA7.444e-1230.16Solute carrier family 22 member 6-A OS=Xenopus lae... [more]
S22A1_PIG9.722e-1228.98Solute carrier family 22 member 1 OS=Sus scrofa GN... [more]
S22A2_PONAB2.166e-1129.38Solute carrier family 22 member 2 OS=Pongo abelii ... [more]
S22A2_PIG2.166e-1129.94Solute carrier family 22 member 2 OS=Sus scrofa GN... [more]
S22A2_HUMAN2.166e-1129.38Solute carrier family 22 member 2 OS=Homo sapiens ... [more]
S22A1_RABIT2.166e-1129.44Solute carrier family 22 member 1 OS=Oryctolagus c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10A08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10A08-A16-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069370 ID=CX069370; Name=CX069370; organism=Citrus sinensis; type=EST; length=808bp
GTCTCGCCAACCGTCATTGACCGGGTCTCCCCACCTCAACCTCTAGCAGG
AATGGTTTTATCCTCCTAGTAGGAGGTCGGCTCCCACTGTGGCCCCGTGG
AGGATACATTCGTGAACAAGCAGAATATTCCTGCTCGTGTTCACCTGCTA
CCTGACTTCTGCAGAATATACCTGTTCGCGGAATCCTGCTATCAGATACC
TGTTCATCATGGCTGGTCTTGTCGAAATATATCCCCCAAACAGGTATCTC
CAACAAAGCATTGAACACCACACCTAGATAGATGTCAAATCCCAAGTTTT
CAATCCCCAATGTCATGCCGTAATATACAACTCCAATGCCAAAACCAAGA
ACCATGAGTGCCAAAGTTCTTTCAAGTGCCCATCTCCTAACGAATAATTC
CCTGATGGATGATAAAAACGAGGATTCCTTGGATGAAGCTGCTGGTTCAT
GTCCAAAGGAGACTGCACTTACCAAGCTCAAGCTTAATTGATTTGAATCC
TTTATGGGCGAAAGGCTTTTAATAACTTCCACGGCTTCTTCTTGGCGGCC
TTGCATGAAAAGCCATCTAGGAGACTCACTAACGAAAATATAAAGCAACC
CACTGTAGACAAGTGTCGGAATCGAAGTCCATAAATAGATAATTGTCCAT
GAAGAGCTTCGATTTGTATAAGCAATTGCCGGCAATGTTAATGTACCTAT
AGTGAAGAAGAAGGAATCCAAAATTCCGACAAGGCCTCGCCACTCTGTCC
CAACTTTCTCCGTTAGTAACACGATAGTACATGTTCCAATCGTGGCTCGG
CTAATCCC
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