CX069370

Overview
NameCX069370
Unique NameCX069370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A1_BOVIN (Solute carrier family 22 member 1 OS=Bos taurus GN=SLC22A1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.166e-11
Identity = 56/187 (29.95%), Postives = 83/187 (44.39%), Query Frame = -1
Query:  242 TCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLS------PIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 784
            T    L+TE VG  +R  V IL    FT+G + L  +AY      W  + L  S+P  +     + FV ESPRWL  Q R  EA++++  ++      P  D   LSL          E              R   +R++    T  LM L F   VVY G+ + +   G ++YL  +++AL+E P
Sbjct:  213 TAGYTLITEFVGLGYRRTVAILYQMAFTVGLVLLSGLAYI--LPHWRWLQLAVSLPIFLLL-FRFWFVPESPRWLLSQKRNTEAIKIMDHIAQKNGKLPPADLKMLSLE---------EDVTEKLSPSFIDLFRTPNLRKY----TFILMYLWFTSSVVYQGLIMHVGATGGNLYLDFLYSALVEFP 383          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A8_PIG (Solute carrier family 22 member 8 OS=Sus scrofa GN=SLC22A8 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11
Identity = 50/198 (25.25%), Postives = 86/198 (43.43%), Query Frame = -1
Query:  242 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDS---------NQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 808
            G S + I   T +L  E V T +R +  I   FF+T G   LP +AY      W  + L  S+P L +  LL  ++ ES RW+ + G+  +A++ ++ ++               +L L+L   +S                 I +LF        TL L +  F  G  YY + +G+E  G ++Y+  +    +++P
Sbjct:  185 GFSISGISLSTAILNVEWVSTRFRAIKSIAVGFFYTFGQFILPGLAYA--IPQWRWLQLTVSVPFLTFF-LLSWWLPESIRWMVLSGKSSKALKTLRQVAIFNGKKEEGEKLSLEELKLNLQKEISLA----------KARHGIADLFRTPVLRRVTLCLSLAWFATGFAYYSLAMGVEEFGVNLYVLQLIFGGVDVP 369          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22A6_PSEAM (Solute carrier family 22 member 6 OS=Pseudopleuronectes americanus GN=SLC22A6 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.825e-11
Identity = 53/190 (27.89%), Postives = 87/190 (45.79%), Query Frame = -1
Query:  242 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXS-IRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIP 808
            G++ + +G  T  L+ E + T  R  VG    + +T+G L L  +AY  R   W  + L  S+P  V+  + + F  ES RWL +  R E A++ +KS++     ++ +  L   +   HE              I +LF      +RTL L  +       YYG+ + ++  G DIYL  V    ++IP
Sbjct:  208 GLALSGLGLNTFSLIVEWIPTRIRTAVGTTTGYCYTLGQLILVLLAYFIRDWRW--LTLAVSLPFYVFFLIAWWF-HESSRWLALSNRTEHALKNLKSVARFNGRHEEAEKL--DIKMLHESMKKEMSCTQGSYSILDLFNTPAMRKRTLCLSAVWLSTSFAYYGLAMDLDKFGVDIYLIQVIFGAVDIP 392          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22FL_XENTR (Solute carrier family 22 member 15-like OS=Xenopus tropicalis GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 54/201 (26.87%), Postives = 88/201 (43.78%), Query Frame = -1
Query:  212 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPVWG--IYFDKTS 808
            GI    +   + VL  E VG  +  L G L +  F +G      + +  R+  W  +    + P + +  LL   + ESPRWL+  G   EA  V++S++      +  + L S       P            + +  V RW   RT+ LM + +   +VYYG+TL    L  ++YL V    L+E+P +   +YF + S
Sbjct:  150 GIMNGGMALVSFVLTQEYVGKSYWALTGSLTNLIFAVGIAFYALLGFYIRN--WRTLAFVANSPGIFFF-LLSFLLPESPRWLYSHGYTTEAEGVLQSMAVGNGVERPVVKLKSC------PGTSSKSAHSVFDLVKYGVLRW---RTILLMYIWYVCSLVYYGLTLNAGELKGNLYLNVALYGLVEVPAFPLCLYFIEKS 338          
BLAST of CX069370 vs. ExPASy Swiss-Prot
Match: S22FL_XENLA (Solute carrier family 22 member 15-like OS=Xenopus laevis GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 53/201 (26.37%), Postives = 89/201 (44.28%), Query Frame = -1
Query:  212 GISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLFMQGRQEEAVEVIKSLSPIKDSNQLSLSLVSAVSFGHEPAAXXXXXXXXXSIRELFVRRWALERTLALMVLGFGIGVVYYGMTLGIENLGFDIYLGVVFNALLEIPVWG--IYFDKTS 808
            G+    +   + VL  E VG  +  L G L +  F +G      + +  R+  W  +    + P + +  LL   + ESPRWL+ +G   EA  V++S++      +  + L S       P            + +  V RW   RT+ LM + +   +VYYG+TL    L  ++YL V    L+E+P +   +YF + S
Sbjct:  150 GVMNGGMALVSFVLTQEYVGKSYWALTGSLTNLIFAVGIAFYALLGFYIRN--WRTLAFVANSPGIFFL-LLSFVLPESPRWLYSRGYTAEAEAVLESMAAGNGVERPVVRLKSC------PGTTANSAHSVFDLVKYGVLRW---RTILLMYIWYVCSLVYYGLTLNAGELKGNLYLNVALYGLVEVPAFPLCLYFIEKS 338          
The following BLAST results are available for this feature:
BLAST of CX069370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
S22A1_BOVIN2.166e-1129.95Solute carrier family 22 member 1 OS=Bos taurus GN... [more]
S22A8_PIG2.829e-1125.25Solute carrier family 22 member 8 OS=Sus scrofa GN... [more]
S22A6_PSEAM4.825e-1127.89Solute carrier family 22 member 6 OS=Pseudopleuron... [more]
S22FL_XENTR8.230e-1126.87Solute carrier family 22 member 15-like OS=Xenopus... [more]
S22FL_XENLA8.230e-1126.37Solute carrier family 22 member 15-like OS=Xenopus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10A08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10A08-A16-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069370 ID=CX069370; Name=CX069370; organism=Citrus sinensis; type=EST; length=808bp
GTCTCGCCAACCGTCATTGACCGGGTCTCCCCACCTCAACCTCTAGCAGG
AATGGTTTTATCCTCCTAGTAGGAGGTCGGCTCCCACTGTGGCCCCGTGG
AGGATACATTCGTGAACAAGCAGAATATTCCTGCTCGTGTTCACCTGCTA
CCTGACTTCTGCAGAATATACCTGTTCGCGGAATCCTGCTATCAGATACC
TGTTCATCATGGCTGGTCTTGTCGAAATATATCCCCCAAACAGGTATCTC
CAACAAAGCATTGAACACCACACCTAGATAGATGTCAAATCCCAAGTTTT
CAATCCCCAATGTCATGCCGTAATATACAACTCCAATGCCAAAACCAAGA
ACCATGAGTGCCAAAGTTCTTTCAAGTGCCCATCTCCTAACGAATAATTC
CCTGATGGATGATAAAAACGAGGATTCCTTGGATGAAGCTGCTGGTTCAT
GTCCAAAGGAGACTGCACTTACCAAGCTCAAGCTTAATTGATTTGAATCC
TTTATGGGCGAAAGGCTTTTAATAACTTCCACGGCTTCTTCTTGGCGGCC
TTGCATGAAAAGCCATCTAGGAGACTCACTAACGAAAATATAAAGCAACC
CACTGTAGACAAGTGTCGGAATCGAAGTCCATAAATAGATAATTGTCCAT
GAAGAGCTTCGATTTGTATAAGCAATTGCCGGCAATGTTAATGTACCTAT
AGTGAAGAAGAAGGAATCCAAAATTCCGACAAGGCCTCGCCACTCTGTCC
CAACTTTCTCCGTTAGTAACACGATAGTACATGTTCCAATCGTGGCTCGG
CTAATCCC
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