CX069358

Overview
NameCX069358
Unique NameCX069358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3928 contig Csv1_Contig3928:7..876. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
BLAST of CX069358 vs. ExPASy Swiss-Prot
Match: ATP9_ORYSJ (ATP synthase subunit 9, mitochondrial OS=Oryza sativa subsp. japonica GN=ATP9 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.915e-16
Identity = 49/70 (70.00%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  486 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLI 695
            MLEGAKL+                 NVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIA FA MMAFLI
Sbjct:    1 MLEGAKLIGAGAATIALAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLI 70          
BLAST of CX069358 vs. ExPASy Swiss-Prot
Match: ATP9_ORYSI (ATP synthase subunit 9, mitochondrial OS=Oryza sativa subsp. indica GN=ATP9 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.915e-16
Identity = 49/70 (70.00%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  486 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLI 695
            MLEGAKL+                 NVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIA FA MMAFLI
Sbjct:    1 MLEGAKLIGAGAATIALAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLI 70          
BLAST of CX069358 vs. ExPASy Swiss-Prot
Match: ATP9_MAIZE (ATP synthase subunit 9, mitochondrial OS=Zea mays GN=ATP9 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.915e-16
Identity = 49/70 (70.00%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  486 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLI 695
            MLEGAKL+                 NVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIA FA MMAFLI
Sbjct:    1 MLEGAKLIGAGAATIALAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLI 70          
BLAST of CX069358 vs. ExPASy Swiss-Prot
Match: ATP9_PETSP (ATP synthase subunit 9, mitochondrial OS=Petunia sp. GN=ATP9 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 48/70 (68.57%), Postives = 48/70 (68.57%), Query Frame = 3
Query:  486 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLI 695
            MLEGAK M                 NV SS IHSVARNPSLAKQ FGYAILGFALTEA ASFAPMMAFLI
Sbjct:    1 MLEGAKSMGAGAATNASAGAAIGIGNVLSSSIHSVARNPSLAKQLFGYAILGFALTEANASFAPMMAFLI 70          
BLAST of CX069358 vs. ExPASy Swiss-Prot
Match: ATP9_VICFA (ATP synthase subunit 9, mitochondrial OS=Vicia faba GN=ATP9 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.505e-16
Identity = 48/70 (68.57%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  486 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLI 695
            MLEGAK +                 NVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIA FA MMAFLI
Sbjct:    1 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLI 70          
BLAST of CX069358 vs. ExPASy Swiss-Prot
Match: ATP9_SOYBN (ATP synthase subunit 9, mitochondrial OS=Glycine max GN=ATP9 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.505e-16
Identity = 48/70 (68.57%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  486 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLI 695
            MLEGAK +                 NVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIA FA MMAFLI
Sbjct:    1 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLI 70          
BLAST of CX069358 vs. ExPASy Swiss-Prot
Match: ATP9_PEA (ATP synthase subunit 9, mitochondrial OS=Pisum sativum GN=ATP9 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.505e-16
Identity = 48/70 (68.57%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  486 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLI 695
            MLEGAK +                 NVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIA FA MMAFLI
Sbjct:    1 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLI 70          
BLAST of CX069358 vs. ExPASy Swiss-Prot
Match: ATP9_MARPO (ATP synthase subunit 9, mitochondrial OS=Marchantia polymorpha GN=ATP9 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15
Identity = 48/70 (68.57%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  486 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLI 695
            MLEGAKL+                 NVFSSLI+SVARNPSLAKQ FGYAILGFALTEAIA FA MMAFLI
Sbjct:    1 MLEGAKLIGAGAATIALAGAAVGIGNVFSSLINSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLI 70          
BLAST of CX069358 vs. ExPASy Swiss-Prot
Match: ATP9_BETVU (ATP synthase subunit 9, mitochondrial OS=Beta vulgaris GN=ATP9 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.051e-14
Identity = 46/70 (65.71%), Postives = 48/70 (68.57%), Query Frame = 3
Query:  486 MLEGAKLMXXXXXXXXXXXXXXXXXNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLI 695
            MLEGAK +                 NVFSSLIHSVARNPSLAKQ FGYAILGFAL+E IA FA MMAFLI
Sbjct:    1 MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALSELIALFALMMAFLI 70          
The following BLAST results are available for this feature:
BLAST of CX069358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ATP9_ORYSJ1.915e-1670.00ATP synthase subunit 9, mitochondrial OS=Oryza sat... [more]
ATP9_ORYSI1.915e-1670.00ATP synthase subunit 9, mitochondrial OS=Oryza sat... [more]
ATP9_MAIZE1.915e-1670.00ATP synthase subunit 9, mitochondrial OS=Zea mays ... [more]
ATP9_PETSP7.278e-1668.57ATP synthase subunit 9, mitochondrial OS=Petunia s... [more]
ATP9_VICFA9.505e-1668.57ATP synthase subunit 9, mitochondrial OS=Vicia fab... [more]
ATP9_SOYBN9.505e-1668.57ATP synthase subunit 9, mitochondrial OS=Glycine m... [more]
ATP9_PEA9.505e-1668.57ATP synthase subunit 9, mitochondrial OS=Pisum sat... [more]
ATP9_MARPO1.241e-1568.57ATP synthase subunit 9, mitochondrial OS=Marchanti... [more]
ATP9_BETVU1.051e-1465.71ATP synthase subunit 9, mitochondrial OS=Beta vulg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10A01-A2-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069358 ID=CX069358; Name=CX069358; organism=Citrus sinensis; type=EST; length=870bp
CTGCTATGCTTTAGCGTATCATCAGGGCAAGGCTTACTAATCGGCTCGAT
CTTTATCGTAATCGTATAAAGAAGAACTGGCCTCGCGTCAGATATTGGTT
GCGCGGATCGGCGGCTTGCAACATCACATCTGGAACGACCGATCTATGAA
TCTAAAGCTTTACGCGTAGAAAGACGTCCAGAAAGCTTGAATAAGATTGT
TTCATTTTTCTACGAAAAAGAAATCTTTCAGAATTCTGAAAGAGTCTTTC
ACTCATGCATTTCCTTTGCGGCAAGAAGAAGACATTGTTGATGCAGTTGC
GCACATTTTTTCTTTTTTTTTTCGTCGAGATTGGGTTGGTGTTCAGTGCC
GTGGGTACAAGATCGAAAAGACGTGGGCAAACCAAGTACGATGCCCAAGA
GAAAAGGAACGAGGGGAAGAATCGACGAGAAATCCATAACAAAAAATCGT
GAATGAAAAAGCGTGACGAGAATTCTCAACCCGAGATGTTAGAAGGTGCA
AAATTAATGGGTGCCGGAGCTGCTACAATTGCTTCAGCGGGAGCTGCTGT
CGGTATTGGAAACGTGTTCAGTTCTTTGATCCATTCCGTGGCACGAAATC
CATCATTGGCTAAACAATCATTTGGTTATGCCATTTTGGGCTTTGCTCTA
ACCGAAGCTATTGCATCGTTTGCCCCAATGATGGCCTTTTTGATCTCATT
CGTCTTCCGATCTAAGAAAGAAAAGAAGGTTTCAGTCTCATAAAGCAAGA
CCTCTTTCACATAAGAAAGTGGAGGCGGGCTTGGGTACGATCTAAAACGA
TTCCACATGAAAGAGGACTGCCCTCTTGAGTAATGGGAAGCGGGCTAGTC
CCCGAAAATGCTCGTTCCGA
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