DR403418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB9_RAT (Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.707e-36 Identity = 73/163 (44.79%), Postives = 105/163 (64.42%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L +Y SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L ++V GWD++EGG++YG +GG +I QPFAI Y+YG+ D A+K GMT EE + A++L Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQVYGT-MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITL 181
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB9_SALSA (Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.031e-36 Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 GTTII + ++GGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK GG++Y V L G + QPFA+ Y+YGF D +++ M+KE+ +Q VV +SL Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVY-VTLNGLLSRQPFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSL 179
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB9_ONCMY (Proteasome subunit beta type-9 OS=Oncorhynchus mykiss GN=psmb9 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.031e-36 Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 GTTII + ++GGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK GG++Y V L G + QPFA+ Y+YGF D +++ M+KE+ +Q VV +SL Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEDLSAHLIVAGWDKRGGGQVY-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSL 179
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB9_HUMAN (Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.755e-35 Identity = 74/163 (45.40%), Postives = 104/163 (63.80%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L + +Y SGSAAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ EGG++YG LGG + QPFAI ++YG+ D A+K GM+ EE + A++L Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIAL 181
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.755e-35 Identity = 71/166 (42.77%), Postives = 108/166 (65.06%), Query Frame = 2 Query: 128 SMGTTIIGVTYNGGVVLGADSRTSTG-VYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 S GTTI+ VT+NGGV++G+DSR S G YV+++ +K+ Q+ D ++ C +GS AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V LGG ++ QPF I Y+YG+ D +K M+KEE Q A++L Sbjct: 14 STGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALAL 179
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB9_MUSSI (Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.993e-35 Identity = 72/163 (44.17%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++L Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITL 181
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB9_MUSMB (Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.993e-35 Identity = 72/163 (44.17%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++L Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITL 181
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB9_MUSDU (Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.993e-35 Identity = 72/163 (44.17%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++L Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITL 181
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB9_MOUSE (Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.993e-35 Identity = 72/163 (44.17%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++L Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITL 181
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PB6LA_SALSA (Proteasome subunit beta type-6-A like protein OS=Salmo salar GN=psmb6l-a PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.993e-35 Identity = 71/166 (42.77%), Postives = 108/166 (65.06%), Query Frame = 2 Query: 128 SMGTTIIGVTYNGGVVLGADSRTSTG-VYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 S GTTI+ VT+NGGV++G+DSR S G YV+++ +K+ Q+ D ++ C +GS AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V LGG ++ QPF I Y+YG+ D +K M+KEE Q A++L Sbjct: 14 STGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALAL 179 The following BLAST results are available for this feature:
BLAST of DR403418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403418 ID=DR403418; Name=DR403418; organism=Citrus sinensis; type=EST; length=624bpback to top |