DR403413

Overview
NameDR403413
Unique NameDR403413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9848 contig Csv1_Contig9848:9..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15
Identity = 77/269 (28.62%), Postives = 124/269 (46.10%), Query Frame = 2
Query:    5 TYSP-DKQIKSEMEERRRIPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIK---RRNTDVIAGSGYMAPTQK-NPLYEALGLYDMASSQAVADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGLMD---------SVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            T++P D  + S       +P IDL +       +  A   WG F++ NH V S L+ +++ +   L  LP++ K    R+ + ++G G        N    + G   + S   + DF   L  S H +  E IE+Y + +Q+LA  L      S+G+ +         S FQ      ++N Y   PE   + G+  HTDS  +TIL  + N  GL+V      +V   P+PG+L VN+GD+  + +NG   +V HR +      R S+
Sbjct:   32 TWTPKDDLLFSASASDETLPLIDLSDI-HVATLVGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSP--LHDF-RKLWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQN-NTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSM 295          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15
Identity = 80/278 (28.78%), Postives = 127/278 (45.68%), Query Frame = 2
Query:   14 PDKQIKSEMEERR---------RIPTIDLGEFPKQLKKL----REASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIA-GSGYM-APTQKNPLYEALG--------LYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL------MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVS 760
            P + I+SE E+           ++P IDLG      + L     EAS EWG F+VVNH +    +A++++V +E  +LP + K    +VIA   GY         L + LG        L+ +   ++  ++    +  P  RE  E+YA A++ +   L   L+  +GL        S   D     +IN Y   P    + GV  HTD   +TIL  +E V GL+V  +   +  V  +P  L +++GD   + SNG+  +V HR    +   R+S
Sbjct:   20 PSEYIRSESEQPAVTTMQGVVLQVPVIDLGSSNNTEENLVELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEK----EVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNE-VQGLQV-HKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMS 291          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15
Identity = 59/233 (25.32%), Postives = 115/233 (49.36%), Query Frame = 2
Query:   92 LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQF-----RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            +K + +A E WG F +VNH +   LM E++++ +E     +E  +R  +++A     A    N +      +       V++     D +   R+ ++++A+ +++LA  +   L E++GL    +   F            +++ Y   P      G++ HTD+G L +L  D+ V GL+++ + G +V V P+  ++ +NLGD   V +NG+  +V HRV  +    R+S+
Sbjct:   21 MKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCME--QRFKELMASKVEGAVVDANDMDWESTFF--IRHLPVSNLSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLL-KDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSL 248          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 57/231 (24.68%), Postives = 120/231 (51.95%), Query Frame = 2
Query:   92 LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            L+K+ +A E WG F +VNH +S+ L+  ++++ ++     +E  +R  +++A  G  A   +    +    + +    + ++     D     R+T++++A  +++LA  L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  ++ +NLGD   V +NG+  ++ HRV  +    R+SI
Sbjct:   21 LEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTME--QRFKEMVAAKGLEAVQSEIHYLDWESTFFLRHLPS-SNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSI 247          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.120e-14
Identity = 76/276 (27.54%), Postives = 123/276 (44.57%), Query Frame = 2
Query:   11 SPDKQIKSEMEERRRIPTIDLGEFPKQLKKLR-EASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRR---NTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDS-----VFQDWPCQ--FRINKY---------NFAPESVGSP-----GVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            SP   I+++  +   IPTIDL     QL +L  +A EE+G F+VVNH V   +++ + +   E        KR+   +T    G   + P       E L L+    S +        D        +  Y +A+++L  ++    AE + + D      + +D       RIN Y         N+ P  + +      G   H+D   LTIL+ + NVGGL++    G ++PV P P    V +GD   V +NGR ++V+HRV    +  R+S+
Sbjct:    5 SPTSMIRTKKTKAVGIPTIDLSLERSQLSELVVKACEEYGFFKVVNHSVPKEVISRLDEEGIEFFSKNSSEKRQAGTSTPFGYGCKNIGPNGDKGELEYLLLHSNPISISERSKTIAKDHPIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSLLRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQILTILRSN-NVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSM 279          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.911e-14
Identity = 69/249 (27.71%), Postives = 116/249 (46.59%), Query Frame = 2
Query:   56 IPTIDLGEFPKQL--KKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKR---RNTDVIAGSGYMAPTQKNPLYEAL---GLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVS 760
            IP +DL +  ++   + + +ASEEWG F+VVNH + + L+  ++ V R+  +LP   K    +  D     GY    QK+P  +      L+      +  ++       P  RE  E+YA  +++L+  L   L++ +GL     ++           +IN Y   P    + GV  HTD   +T+L  +E V GL+V  +   +   + +P  + V++GD     SNGR  NV HR    +   R+S
Sbjct:   43 IPVVDLSDPDEESVRRAVVKASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNE-VPGLQVF-KDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKTRMS 289          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.911e-14
Identity = 59/232 (25.43%), Postives = 117/232 (50.43%), Query Frame = 2
Query:   92 LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMA-PTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQ------DWPC-QFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            ++K+++A E WG F +V+H + +  +  ++++ +E     LE  +R  +++A  G  A  T+ N +      Y        ++     D     R  ++++A  +++LA  L   L E++GL     +      + P    +++ Y   P      G++ HTD+G L +L  D+ V GL+++ + G ++ V P+  ++ +NLGD   V +NG+  +V+HRV  +    R+SI
Sbjct:   21 MEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLE--QRFKELVASKGLEAVKTEVNDMDWESTFY--LRHLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSI 247          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14
Identity = 66/260 (25.38%), Postives = 118/260 (45.38%), Query Frame = 2
Query:   44 ERRRIPTIDLGEFP--------KQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAG---SGY---MAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMD-------SVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVS 760
            E  ++PTIDL E          K  +KL++A+ +WG   +VNH +S  LM ++++  +   DLP+E K +  +  A     GY   +A      L      +     +   D            E   +YA+ ++ELA  +   L+  +GL +          ++   Q +IN Y   P+   + GV+ HTD   LT +  +  V GL++    G +V    +P ++ +++GD   + SNG+  ++ HR    +  +R+S
Sbjct:   47 EGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLF-YEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKEKVRIS 304          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14
Identity = 76/264 (28.79%), Postives = 111/264 (42.05%), Query Frame = 2
Query:   44 ERRRIPTIDLG---EFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLY-----DMASSQAVADFCSHLDASPHQR---ETIEKYAQAIQELAVDLAHKLAESMGLMDS-------VFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            E   +  ID+G   E    ++++ EA E  G F VVNH + + L+ E  + +     LPL  K+R       S GY +        K P  E L        D    + V ++      + H R   E   +Y   +  L+++L   L ES+G++          FQ      R+N Y      + + G   H D   LTIL  D +VGGLEV    G +  + P PG L VN+GD     SN R  +  HR     +A R S+
Sbjct:   42 EELEVALIDVGAGAERSSVVRQVGEACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVW-AEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSL 303          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14
Identity = 57/231 (24.68%), Postives = 117/231 (50.65%), Query Frame = 2
Query:   92 LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQ---FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            ++ +++A E WG F +VNH +   +M  ++++ +      +E  +R  +++A  G  A   +    +    + +     V++ C   D     RE +  +A+ +++LA +L   L E++GL    +  +F          +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  ++ VNLGD   V +NG+  +V HRV  +    R+S+
Sbjct:   21 MEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLP-VSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLL-KDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSL 247          
The following BLAST results are available for this feature:
BLAST of DR403413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
G3OX2_ARATH6.567e-1528.62Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
FLS_PETCR6.567e-1528.78Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
ACCO_PERAE6.567e-1525.321-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO2_MALDO8.577e-1524.681-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
G2OX2_PEA1.120e-1427.54Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum ... [more]
FLS1_ARATH1.911e-1427.71Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
ACCO_PRUMU1.911e-1425.431-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
LDOX_MALDO2.495e-1425.38Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
GAOX1_ORYSJ2.495e-1428.79Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
ACCO_TOBAC2.495e-1424.681-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244P03 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244P03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403413 ID=DR403413; Name=DR403413; organism=Citrus sinensis; type=EST; length=763bp
GGGGACGTATTCACCAGATAAACAAATAAAAAGTGAGATGGAGGAGAGGA
GAAGGATCCCGACGATAGATCTGGGGGAATTCCCGAAGCAGCTGAAGAAA
CTGAGAGAAGCAAGCGAGGAATGGGGATGCTTCAGGGTGGTGAACCACAA
GGTCTCGTCAACGCTGATGGCGGAAATGAAGCAAGTGGTGAGGGAGCTTT
TGGATCTTCCTCTCGAGATCAAACGACGCAACACCGATGTGATCGCCGGC
AGCGGCTACATGGCTCCCACCCAGAAGAATCCTCTGTATGAAGCTTTGGG
TCTCTACGACATGGCTTCTTCTCAAGCTGTTGCTGACTTTTGTTCTCACC
TGGATGCCTCTCCTCATCAGAGAGAGACAATAGAGAAATATGCTCAAGCA
ATACAAGAGTTGGCCGTGGATTTGGCGCATAAATTGGCCGAGAGTATGGG
GTTGATGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTTTAGGATAAACA
AGTACAACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAGTGCAATTACAC
ACAGATTCAGGGTTCCTTACTATTCTTCAAGATGATGAAAATGTTGGTGG
CCTCGAAGTGATGGACAGAGCTGGTGCATTTGTACCTGTTGATCCCTTGC
CCGGCACCCTCCCTGTCAATCTTGGAGACATTGCCACGGTATGGAGTAAC
GGAAGGTTGCTCAATGTGAAGCATAGAGTGCAGTGCAAGGAATCAGCAAT
AAGAGTATCGATT
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