DR403413

Overview
NameDR403413
Unique NameDR403413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9848 contig Csv1_Contig9848:9..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14
Identity = 60/247 (24.29%), Postives = 122/247 (49.39%), Query Frame = 2
Query:   59 PTIDLGEFPKQLKK-----LREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            P +D+G+   + +K     +++A E WG F  VNH +S  +M  ++++ +E     +E  +R  +++A  G      +    +    + +     V+      D     R+ ++++A  ++ELA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  ++ +NLGD   V +NG+  +V HRV  +    R+SI
Sbjct:    5 PIVDMGKLNTEDRKSTMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCME--QRFKEMVATKGLECVQSEIDDLDWESTFFLRHLP-VSSISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSI 247          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13
Identity = 68/257 (26.46%), Postives = 112/257 (43.58%), Query Frame = 2
Query:   56 IPTIDLG-----EFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLE-------IKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQ-------DWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            IP ID       E  + + ++    EEWG F++VNH +   L+  +K+V  E   L  E       ++  +T V  G G           + L   D      + D        P   ET+++Y + I++LA  +   + E++G      +         P  F  +++ Y   P      G++ HTD+G + +L  D+ VGGL+++ + G ++ V PL   + +N GD   V SNGR  +  HRV       R SI
Sbjct:    3 IPVIDFSKLDGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREERFEGSKPVQLLDTLVKEGDG-----------QRLDNVDWEDVFVLQDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQML-KDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSI 247          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13
Identity = 72/280 (25.71%), Postives = 127/280 (45.36%), Query Frame = 2
Query:   14 PDKQIKSEMEERR---------RIPTIDLGEFP--KQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGS-------GYMAPTQKNPLYEALG-------LYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVF------QDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVS 760
            P + I+SE E+           ++P IDL +    K +K + +AS+EWG F+++NH +    +A++++V +E  +    + +   ++IA +       GY    QK    E  G       L+      +  ++       P  RE  E+Y + ++E+   +   L+  +GL            +     +IN Y   P    + GV  HTD  ++TIL  +E V GL+V  + G +  V  +P  L V++GD   + SNG+  +V HR    +   R+S
Sbjct:   32 PSEYIRSENEQPAATTLHGVVLQVPVIDLRDPDENKMVKLIADASKEWGIFQLINHGIPDEAIADLQKVGKEFFE---HVPQEEKELIAKTPGSNDIEGYGTSLQK----EVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVPNE-VQGLQVF-KDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMS 302          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13
Identity = 56/231 (24.24%), Postives = 116/231 (50.22%), Query Frame = 2
Query:   92 LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            ++ +++A E WG F +VNH +   +M  ++++ +      +E  +R  +++A  G  A   +    +    + +     V++     D     RE +  +A+ +++LA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  ++ VNLGD   V +NG+  +V HRV  +    R+S+
Sbjct:   21 MEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLP-VSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSL 247          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13
Identity = 69/250 (27.60%), Postives = 111/250 (44.40%), Query Frame = 2
Query:   56 IPTIDLGEFPKQLKK-LREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPL--------EIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQ-RETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQD----WPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            +P IDL     ++++ + EA +E G F+VVNH VS  +M +M+ +  +   LP         E + +   + +G+ Y    +K    + L L   A    V D  +    +P   R+ IEK+    +++  +L   L E MG+    F+           IN Y   P    + G   H D   +T+L     V GLEV  + G ++ VDP P    VN G    V +NG L +++HR     +  R S+
Sbjct:   35 LPIIDLSCGRDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEKY-WRDCLRL---ACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGA-VNGLEVSYK-GDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSV 278          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13
Identity = 68/240 (28.33%), Postives = 114/240 (47.50%), Query Frame = 2
Query:   56 IPTIDLGEFPKQ-------LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRR--NTDVIAGSGYMAPTQKNPLYE--ALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDWPCQFRI----NKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRV 730
            IPTIDLG   +        + K+++A E++G F+ +NH V   +M +M   +R   D   E+++     D      Y +      LYE  A    D  S     D     D      E + +Y++ + +LA  +   L+E++GL  +  ++  C   +    + +   PE   + G   HTD  FLTIL +D N GGL+V+   G ++ V P P  L  N+GD   + SN + ++++HR+
Sbjct:   55 IPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNAD---LYESPAASWRDTLSCVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNN-GGLQVL-YDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRI 289          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13
Identity = 56/220 (25.45%), Postives = 111/220 (50.45%), Query Frame = 2
Query:   92 LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVF---QDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRV 730
            ++K+++A E WG F  VNH +S  L+ +++++ +E     +E + + +    G   +     +  +E+           ++D     D     R  ++ +A  I++L+ +L   L E++GL    +  VF   +      +++ Y   P      G++ HTD+G + +L  D+ V GL+++ + G +V V P+  ++ VNLGD   V +NG+  +V+HRV
Sbjct:   21 MEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDV---PDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRV 236          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13
Identity = 66/269 (24.54%), Postives = 118/269 (43.87%), Query Frame = 2
Query:   17 DKQIKSEMEERRRIPTIDLGEFPKQLKKLRE--------ASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRR-----NTDVIAGSG-YMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMD-------SVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVS 760
            D  ++ + E+  ++PTIDL       +K+RE        AS +WG   ++NH + + LM  +K+   E   L +E K +      T  I G G  +A      L      + +A  +   D            E   +YA+ ++ LA  +   L+  +GL            ++   Q +IN Y   P+   + GV+ HTD   LT +  +  V GL++    G +V    +P ++ +++GD   + SNG+  ++ HR    +  +R+S
Sbjct:   34 DVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLF-YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 300          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13
Identity = 65/255 (25.49%), Postives = 115/255 (45.10%), Query Frame = 2
Query:   56 IPTIDLGE--FPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKR---RNTDVIAGSGY---------MAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQ------DWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVS 760
            +P ID  +    K + ++ EAS  WG +++VNH + S ++++++ V +E  +LP E K    +  D  +  GY            T K    +   L++     +V ++       P  RE  E+YA+ +  +   L   L+  +GL     +      +     +IN Y   P    + GV  HTD   +TIL  ++ V GL+   + G +  V  +P  L +++GD   + SNG+  +V HR    +   R+S
Sbjct:   41 VPIIDFSDPDEEKLIVQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVD--NLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVPND-VQGLQAC-KDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRIS 291          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13
Identity = 58/240 (24.17%), Postives = 114/240 (47.50%), Query Frame = 2
Query:   92 LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHL---------DASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            ++K+ +A E WG F +VNH +   +M  ++++ +      +E  +R  +++A  G           E + +           F  HL         D     RE +  + + +++LA +L   L E++GL  S  ++            +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  ++ VNLGD   V +NG+  +V HRV  ++   R+S+
Sbjct:   21 MEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCME--QRFKELVAKKG----------LEGVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSL 247          
The following BLAST results are available for this feature:
BLAST of DR403413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
ACCO_PEA3.259e-1424.291-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO_MUSAC1.238e-1326.461-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
FLS_PETHY2.112e-1325.71Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
ACCO3_PETHY2.112e-1324.241-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
IDS3_HORVU3.603e-1327.602'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
GSL_ARATH3.603e-1328.33Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
ACCO1_ARATH3.603e-1325.451-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
LDOX_ARATH4.706e-1324.54Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FLS_MALDO4.706e-1325.49Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
ACCO2_SOLLC4.706e-1324.171-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244P03 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244P03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403413 ID=DR403413; Name=DR403413; organism=Citrus sinensis; type=EST; length=763bp
GGGGACGTATTCACCAGATAAACAAATAAAAAGTGAGATGGAGGAGAGGA
GAAGGATCCCGACGATAGATCTGGGGGAATTCCCGAAGCAGCTGAAGAAA
CTGAGAGAAGCAAGCGAGGAATGGGGATGCTTCAGGGTGGTGAACCACAA
GGTCTCGTCAACGCTGATGGCGGAAATGAAGCAAGTGGTGAGGGAGCTTT
TGGATCTTCCTCTCGAGATCAAACGACGCAACACCGATGTGATCGCCGGC
AGCGGCTACATGGCTCCCACCCAGAAGAATCCTCTGTATGAAGCTTTGGG
TCTCTACGACATGGCTTCTTCTCAAGCTGTTGCTGACTTTTGTTCTCACC
TGGATGCCTCTCCTCATCAGAGAGAGACAATAGAGAAATATGCTCAAGCA
ATACAAGAGTTGGCCGTGGATTTGGCGCATAAATTGGCCGAGAGTATGGG
GTTGATGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTTTAGGATAAACA
AGTACAACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAGTGCAATTACAC
ACAGATTCAGGGTTCCTTACTATTCTTCAAGATGATGAAAATGTTGGTGG
CCTCGAAGTGATGGACAGAGCTGGTGCATTTGTACCTGTTGATCCCTTGC
CCGGCACCCTCCCTGTCAATCTTGGAGACATTGCCACGGTATGGAGTAAC
GGAAGGTTGCTCAATGTGAAGCATAGAGTGCAGTGCAAGGAATCAGCAAT
AAGAGTATCGATT
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