DR403413

Overview
NameDR403413
Unique NameDR403413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9848 contig Csv1_Contig9848:9..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.146e-13
Identity = 66/264 (25.00%), Postives = 115/264 (43.56%), Query Frame = 2
Query:   29 KSEMEERRRIPTIDLGEFPKQLKKLRE-------ASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRR------NTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMD-------SVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVS 760
            + + +E  ++PTIDL E   + K++RE       A+ EWG   +VNH +S  L+  +K       D P+E K +      N +V      +A +    L      +  A  +   D                +YA+ I+ LA  +   L+  +GL +          +D   Q +IN Y   P+   + GV+ HTD   LT +  +  V GL++    G +V    +P ++ +++GD   + SNG+  ++ HR    +  +R S
Sbjct:   43 EEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLF-YEGQWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVNKEKVRFS 304          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.146e-13
Identity = 71/282 (25.18%), Postives = 130/282 (46.10%), Query Frame = 2
Query:   14 PDKQIKSEMEERR---------RIPTIDLGEFP----KQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAG-------SGYMAPTQKNPLYEALG-------LYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSV-FQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVS 760
            P + I+SE E+            +P ID+        K +K++ EAS+EWG F+V+NH +   ++  +++V +E  +   E+ +   ++IA         GY    QK    E  G       L+      +  ++       P  RE  E+YA+ ++++A  +   L+  +GL     M++   +D     +IN Y   P    + GV  HTD  ++T+L  +E    ++V  + G +  V+ +P  + V++GD   + SNG+  +V HR    +   R+S
Sbjct:   34 PSEYIRSENEQPAATTLQGVVLEVPVIDISNVDDDEEKLVKEIVEASKEWGIFQVINHGIPDEVIENLQKVGKEFFE---EVPQEEKELIAKKPGAQSLEGYGTSLQK----EIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNE----VQVF-KDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRTTVNKYKTRMS 303          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.146e-13
Identity = 56/236 (23.73%), Postives = 117/236 (49.58%), Query Frame = 2
Query:   77 EFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            E  K ++ +++A E WG F +VNH +   +M  ++++ +      +E  +R  +++A  G  A   +    +    + +      ++     D     RE +  +A+ +++LA +L   L E++GL      ++ +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  ++ VNLGD   V +NG+  +V HRV  +    R+S+
Sbjct:   16 ERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPT-SNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSL 247          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12
Identity = 73/261 (27.97%), Postives = 107/261 (41.00%), Query Frame = 2
Query:   44 ERRRIPTIDLGEF--------PKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLYDMASSQA-VADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            E   +P ID+G           +  + + EA E  G F+VVNH + + L+A+  + V     +PL  K+R       S GY +        K P  E L      S  A V D+        H+R  E   +Y   +  L++++   L ES+G+        F+      R+N Y      + + G   H D   LTIL  D NVGGL+V    G +  + P      VN+GD     SNGR  +  HR        R S+
Sbjct:   35 EELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQD-NVGGLQV-HTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSL 293          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12
Identity = 73/261 (27.97%), Postives = 107/261 (41.00%), Query Frame = 2
Query:   44 ERRRIPTIDLGEF--------PKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLYDMASSQA-VADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            E   +P ID+G           +  + + EA E  G F+VVNH + + L+A+  + V     +PL  K+R       S GY +        K P  E L      S  A V D+        H+R  E   +Y   +  L++++   L ES+G+        F+      R+N Y      + + G   H D   LTIL  D NVGGL+V    G +  + P      VN+GD     SNGR  +  HR        R S+
Sbjct:   35 EELHVPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQD-NVGGLQV-HTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSL 293          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12
Identity = 65/254 (25.59%), Postives = 117/254 (46.06%), Query Frame = 2
Query:   56 IPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVAD------FCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQ--FRINKYNFAPESVGSP-------GVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRV--QCKESAI 751
            IP ID+ + P+    L +A E++G F+V+NH VS+ L++ ++    +   LP   K +    +AG  +     K      +G  +     A  D      F S L +    R  +E+Y  +++++  D+  K+ + +G+     +  +  D       R+N Y   P S           G   HTD   +++L+ + N  GL++    G+++ V P   +   N+GD   V +NGR  +V+HRV   CK+S +
Sbjct:   18 IPVIDMSD-PESKHALVKACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKTQ----VAGYPFGYGNSKIGRNGDVGWVEYLLMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSN-NTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRV 265          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.369e-12
Identity = 71/270 (26.30%), Postives = 121/270 (44.81%), Query Frame = 2
Query:   20 KQIKSEMEERRRIPTIDLGEFPKQL-KKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPT-QKNPLY---EALGLYDMAS-SQAVADFCSHLDAS---------PHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAP------ESVGSPGVQLHTDSGFLTILQDDENVGGLE-VMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            K+ + ++     +P IDL +    L +++ +A +++G F+V+NH     LM E  +V +E   LP E K +       + +  P  QK  LY   E L   +       +A  C  LD              RE + KY+  +++L + +   + E +GL    F +   Q ++   N+ P       ++GS G   H D   +T+LQ D  + GL+ ++ +   ++ V P+P    VNLG    V +N +     HRV    +  RVSI
Sbjct:   23 KRAEKDVPVGNDVPIIDLQQHHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGG---HYDGNLITLLQQD--LPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSI 287          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12
Identity = 54/231 (23.38%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   92 LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            ++ +++A E WG F +VNH +   +M  +++  +      +E  +R  +++A  G  A   +    +    + +     V++     D     RE +  +A+ +++LA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  ++ +NLGD   V +NG+  +V HRV  +    R+S+
Sbjct:   21 MEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLP-VSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSL 247          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12
Identity = 55/234 (23.50%), Postives = 112/234 (47.86%), Query Frame = 2
Query:   86 KQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAI-RVSI 763
            K L+++ +A + WG F +VNH +    +  ++++ R+     +E + + T +  G         +  +E+           ++      D     ++ ++++A+ ++ LA +L   L E++GL     +             +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+   + VNLGD   V +NGR  +V HRV  + S   R+SI
Sbjct:   19 KILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEAAQAEVNDMDWESTFFLRHLPESNISQMS---DLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSI 248          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.050e-12
Identity = 54/231 (23.38%), Postives = 115/231 (49.78%), Query Frame = 2
Query:   92 LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            ++ +++A E WG F +VNH +   +M  ++++ +      +E  +R  +++A  G  A   +    +    + +      ++     D     RE +  +A+ +++LA +L   L E++GL      ++ +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  ++ VNLGD   V +NG+  +V HRV  +    R+S+
Sbjct:   21 MEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPT-SNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSL 247          
The following BLAST results are available for this feature:
BLAST of DR403413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
LDOX_PETHY6.146e-1325.00Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
FLS_SOLTU6.146e-1325.18Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
ACCO4_SOLLC6.146e-1323.731-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
GAO1D_WHEAT1.048e-1227.97Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
GAO1B_WHEAT1.048e-1227.97Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
G2OX1_ARATH1.048e-1225.59Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
HY6H_HYONI1.369e-1226.30Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO4_PETHY2.336e-1223.381-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_CUCME2.336e-1223.501-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO1_SOLLC3.050e-1223.381-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244P03 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244P03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403413 ID=DR403413; Name=DR403413; organism=Citrus sinensis; type=EST; length=763bp
GGGGACGTATTCACCAGATAAACAAATAAAAAGTGAGATGGAGGAGAGGA
GAAGGATCCCGACGATAGATCTGGGGGAATTCCCGAAGCAGCTGAAGAAA
CTGAGAGAAGCAAGCGAGGAATGGGGATGCTTCAGGGTGGTGAACCACAA
GGTCTCGTCAACGCTGATGGCGGAAATGAAGCAAGTGGTGAGGGAGCTTT
TGGATCTTCCTCTCGAGATCAAACGACGCAACACCGATGTGATCGCCGGC
AGCGGCTACATGGCTCCCACCCAGAAGAATCCTCTGTATGAAGCTTTGGG
TCTCTACGACATGGCTTCTTCTCAAGCTGTTGCTGACTTTTGTTCTCACC
TGGATGCCTCTCCTCATCAGAGAGAGACAATAGAGAAATATGCTCAAGCA
ATACAAGAGTTGGCCGTGGATTTGGCGCATAAATTGGCCGAGAGTATGGG
GTTGATGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTTTAGGATAAACA
AGTACAACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAGTGCAATTACAC
ACAGATTCAGGGTTCCTTACTATTCTTCAAGATGATGAAAATGTTGGTGG
CCTCGAAGTGATGGACAGAGCTGGTGCATTTGTACCTGTTGATCCCTTGC
CCGGCACCCTCCCTGTCAATCTTGGAGACATTGCCACGGTATGGAGTAAC
GGAAGGTTGCTCAATGTGAAGCATAGAGTGCAGTGCAAGGAATCAGCAAT
AAGAGTATCGATT
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