DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 7.750e-92
Identity = 167/207 (80.68%), Postives = 180/207 (86.96%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEY NE GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVD+YGTGKI DK+IL ++KENF
Sbjct:  135 PELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNENGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENF 341
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 7.750e-92
Identity = 168/207 (81.16%), Postives = 180/207 (86.96%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEY NE GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KE+F
Sbjct:  136 PELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKESF 342
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 7.750e-92
Identity = 168/207 (81.16%), Postives = 180/207 (86.96%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLATKLGA+LTEVRKN TC WLRPDGKTQVT+EYRN+GGAMVP+RVHTVLISTQHDETVT +QI+ DLK+HVIKPVIP  +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRCLVQVSYAIGVPEPLSVFVD+YGTG I DK IL LIK+NF
Sbjct:  135 PELMPLTHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTIEYRNDGGAMVPERVHTVLISTQHDETVTNDQIAADLKQHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGTIPDKVILELIKKNF 341
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.012e-91
Identity = 167/207 (80.68%), Postives = 180/207 (86.96%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLAT+LGARLTEVRKN TCPWLRPDGKTQVTVEY N+ GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KE F
Sbjct:  135 PELMPLTHVLATRLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCVVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETF 341
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.012e-91
Identity = 168/207 (81.16%), Postives = 180/207 (86.96%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEY NE GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KE+F
Sbjct:  136 PELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKESF 342
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.012e-91
Identity = 166/207 (80.19%), Postives = 180/207 (86.96%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYI RQAAKS+VA+GLARRC+VQ+SYAIGVPEPLSVFVDTYGTGKI DK+IL ++KE+F
Sbjct:  139 PELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESF 345
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.012e-91
Identity = 167/207 (80.68%), Postives = 179/207 (86.47%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KENF
Sbjct:  135 PELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNDNGAMVPLRVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKENF 341
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.012e-91
Identity = 165/207 (79.71%), Postives = 179/207 (86.47%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT +LATKLGARLTEVRKN TC WLRPDGKTQVT+EY NEGGAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYI RQAAKS++ASGLARRC+VQ+SYAIGVPEPLSVFVD+YGTGKI D++IL L+KENF
Sbjct:  137 PELMPLTHMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENF 343
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.012e-91
Identity = 166/207 (80.19%), Postives = 179/207 (86.47%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEYRNE GA VP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AY+ RQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTG+I DK+IL ++KENF
Sbjct:  138 PELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENF 344
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 335.88 bits (860), Expect = 1.012e-91
Identity = 166/207 (80.19%), Postives = 179/207 (86.47%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEYRNE GA VP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AY+ RQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTG+I DK+IL ++KENF
Sbjct:  138 PELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENF 344
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK5_VITVI7.750e-9280.68S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK3_POPTR7.750e-9281.16S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK3_PICSI7.750e-9281.16S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK_GOSHI1.012e-9180.68S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK5_POPTR1.012e-9181.16S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK3_ATRNU1.012e-9180.19S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK2_SOLLC1.012e-9180.68S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK2_HORVU1.012e-9179.71S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK1_ORYSJ1.012e-9180.19S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI1.012e-9180.19S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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