DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 3.846e-91
Identity = 166/207 (80.19%), Postives = 178/207 (85.99%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEY NE GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYI RQAAKS+VASGLARRC+VQ+SYAIGVPEPLSVFVDTYGTGKI D++IL ++KENF
Sbjct:  139 PELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSRKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIHDREILKIVKENF 345
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 5.023e-91
Identity = 164/207 (79.23%), Postives = 180/207 (86.96%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLATKLG+RLTEVRKN TC WLRPDGKTQVT+EY NE GAMVP RVHTVLISTQHDETV+ +QI+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AY+VRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVD+YGTGKI D++IL ++KENF
Sbjct:  136 PELMPLTHVLATKLGSRLTEVRKNGTCAWLRPDGKTQVTIEYYNENGAMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENF 342
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 5.023e-91
Identity = 166/207 (80.19%), Postives = 180/207 (86.96%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLATKLGA+LTEVRKN TCPWLRPDGKTQVT+EY NE GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARR +VQVSYAIGVPEPLSVFVD+YGTGKI DK+IL ++KE+F
Sbjct:  135 PELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYINESGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRVIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESF 341
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 5.023e-91
Identity = 165/207 (79.71%), Postives = 179/207 (86.47%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC W+RPDGKTQVTVEY NE GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIPA +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYI RQAAKS++ASGLARRC+VQ+SYAIGVPEPLSVFVD+YGTGKI D++IL L+KENF
Sbjct:  137 PELMPLSHVLATKLGARLTEVRKNGTCAWVRPDGKTQVTVEYLNEDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENF 343
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 5.023e-91
Identity = 166/207 (80.19%), Postives = 179/207 (86.47%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYI RQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVD+YGTGKI DK+IL ++KENF
Sbjct:  137 PELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNDAGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENF 343
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 5.023e-91
Identity = 164/207 (79.23%), Postives = 178/207 (85.99%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT +LATKLGARLTEVRKN TC WLRPDGKTQVT+EY NEGGAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE TIFHLNPSGRFVIGGPHGDAGLT RKIIIDTY             KD TKVDRS AYI RQAAKS++ASGLARRC+VQ+SYAIGVPEPLSVFVD+YGTGKI D++IL L+KENF
Sbjct:  137 PELMPLTHMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLTARKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENF 343
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 6.561e-91
Identity = 166/207 (80.19%), Postives = 179/207 (86.47%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEY NE GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHG++GLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KE F
Sbjct:  136 PELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGESGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKERF 342
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 6.561e-91
Identity = 167/207 (80.68%), Postives = 179/207 (86.47%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VAS LARRC+VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KENF
Sbjct:  136 PELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENF 342
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 6.561e-91
Identity = 166/207 (80.19%), Postives = 179/207 (86.47%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLATKLGA+LTEVRKN TCPWLRPDGKTQVT+EYRNEGGAMVP+RVHTVLISTQHDETVT +QI+ DLKEHVIKPVIP  +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRCLVQVSYAIGV   LS+FVD+YGTG I DK+IL +IKE+F
Sbjct:  135 PELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVRGALSIFVDSYGTGSIPDKEILEIIKEHF 341
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 6.561e-91
Identity = 164/207 (79.23%), Postives = 181/207 (87.44%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRK+ TCPWLRPDGKTQVTVEY N+ GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPV+P  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVP+PLSVFVD+YGTGKI DK+IL ++KENF
Sbjct:  135 PELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGKIPDKEILKIVKENF 341
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_DIACA3.846e-9180.19S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK_MEDTR5.023e-9179.23S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK4_ARATH5.023e-9180.19S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK3_HORVU5.023e-9179.71S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK2_ORYSJ5.023e-9180.19S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK1_HORVU5.023e-9179.23S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK_POPDE6.561e-9180.19S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK_PHALU6.561e-9180.68S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK2_PINCO6.561e-9180.19S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK2_ELAUM6.561e-9179.23S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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