DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 6.561e-91
Identity = 166/207 (80.19%), Postives = 180/207 (86.96%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY NE GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVD+YGTGKI DK+IL ++KE+F
Sbjct:  135 PELMPLSHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTVEYFNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.462e-90
Identity = 164/207 (79.23%), Postives = 179/207 (86.47%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WL+PDGKTQVTVEY N+ GAM+P RVHTVLISTQHDETVT ++I+ DLKEH IKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI D++IL ++KENF
Sbjct:  135 PELMPLSHVLATKLGARLTEVRKNGTCRWLKPDGKTQVTVEYCNDNGAMIPIRVHTVLISTQHDETVTNDEIARDLKEHAIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.462e-90
Identity = 164/207 (79.23%), Postives = 180/207 (86.96%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLATKLGA+LTEVRKN TCPWLRPDGKTQVT+EY N+ GAMVP RVHTVLISTQHDETVT ++I+ DLK+HVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVD+YGTGKI DK+IL ++KE F
Sbjct:  137 PELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYFNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILNIVKETF 343          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 1.909e-90
Identity = 165/207 (79.71%), Postives = 179/207 (86.47%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TC WLRPDGKTQVTVEY N  GAMVP RVHTVLISTQHDETVT ++I+ DLK+HVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVD+YGTGKI D++IL ++KENF
Sbjct:  135 PELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNGNGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILKIVKENF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 4.253e-90
Identity = 165/206 (80.10%), Postives = 179/206 (86.89%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL+ VLATKLGARLTEVRKN TCPWLRPDGKTQVTVEY NE GA VP RVHT+LISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KE+F
Sbjct:  136 ELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEKGATVPIRVHTLLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 4.253e-90
Identity = 163/207 (78.74%), Postives = 178/207 (85.99%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN  C WLRPDGKTQVTVEY+N+ GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYI RQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI D++IL ++ ENF
Sbjct:  138 PELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYQNDNGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILRIVTENF 344          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.237e-89
Identity = 162/207 (78.26%), Postives = 179/207 (86.47%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGA+LTEVRKN TCPWLRPDGKTQVTVEY N+ GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKP+IPA +LDE+TIFHLNPSGRFVIGGPHGDAGLTGR IIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVP+PLSVFVD+YGTG I DK+IL ++KE F
Sbjct:  135 PELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIIPAKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRMIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGNIPDKEILKIVKETF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 6.141e-89
Identity = 163/207 (78.74%), Postives = 177/207 (85.51%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN  C WLRPDGKTQVTVEY N+ GAMVP RVHTVLISTQHDETV+ ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARR +VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KE F
Sbjct:  135 PELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVSNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.047e-88
Identity = 162/206 (78.64%), Postives = 176/206 (85.44%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMP   VLATKLGA+LTEVRKN TCPWLRP GKTQVTVEYRN+ GAMVP+RVHTVLISTQHDETV  ++I+ DLKEHVIKPVIP  +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLS+FVDTYGTG I DK+IL +IKE+F
Sbjct:  136 ELMPKCHVLATKLGAKLTEVRKNGTCPWLRPHGKTQVTVEYRNDNGAMVPERVHTVLISTQHDETVPNDEIAPDLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSLFVDTYGTGSIPDKEILEIIKEHF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.368e-88
Identity = 162/207 (78.26%), Postives = 177/207 (85.51%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATK+GARLTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKP+IP  +LD++TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKSVVA+G+ARR LVQVSYAIGVPEPLSVFVDTYGTG I DK+IL ++KE F
Sbjct:  135 PELMPLSHVLATKIGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKETF 341          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_BRAJU6.561e-9180.19S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK_SOLBR1.462e-9079.23S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK_MEDFA1.462e-9079.23S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK_LITCN1.909e-9079.71S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK_CAMSI4.253e-9080.10S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK3_ORYSJ4.253e-9078.74S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK2_DAUCA1.237e-8978.26S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK2_BETVU6.141e-8978.74S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK_PINBN1.047e-8878.64S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK2_ARATH1.368e-8878.26S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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