DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.853e-77
Identity = 144/207 (69.57%), Postives = 163/207 (78.74%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLATKLG RLT VRK+ TCPW+ PDGKTQVT+EY NEGGAM+P+RVHT+LISTQH E V+ E+I+EDL   VIK V+P  +LD  TIFHLNPSGRFVIGGP GDAGLTGRKIIIDTY             KD TKVDRS AYI RQ AKS+VA+GLARR L Q+SYAIGV +PLS+ VDTYG+GKI D +IL  +KE F
Sbjct:  134 PELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMIPKRVHTILISTQHIEGVSNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNPSGRFVIGGPDGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKF 340          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 5.774e-71
Identity = 136/207 (65.70%), Postives = 158/207 (76.33%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            P LMPLT  LA++L  +LTE+R N T  W RPD KTQVTVEY+ EG  + P RVHT++ISTQHDE VT EQI  DLKE VIK V+PA +LD+ TI+HLNPSGRFVIGGP GD+GLTGRKIIID+Y             KD+TKVDRS AY  R  AKS+VA+GLA RCLVQVSY+IGV +PLSVFVDTYGTGK +D +ILA+I  NF
Sbjct:  134 PTLMPLTHFLASELVNKLTELRHNGTLAWARPDAKTQVTVEYKKEGHKITPVRVHTIVISTQHDEKVTNEQIRADLKELVIKAVVPAQYLDDNTIYHLNPSGRFVIGGPMGDSGLTGRKIIIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNF 340          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.054e-68
Identity = 135/209 (64.59%), Postives = 152/209 (72.73%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGT--GKISDKDILALIKENF 622
            PE MP+T VLAT+L  R+TEVR N    W+RPD KTQVTVEYRNE G ++P R HTV+IS QH E VT E+I + L E VIKP IPAH LD  TIFHLNPSGRFVIGGP G+AGLTG KIIIDTY             KD +KVDRSAAY  R  AKS+VA GLA R LVQVSYAIGV  PLSVFVD+YGT  G  +D+D+LA+ K NF
Sbjct:  136 PEFMPMTHVLATRLCQRMTEVRNNSILSWMRPDAKTQVTVEYRNENGTLIPLRRHTVVISVQHSEDVTNEEIRKRLMEEVIKPSIPAHLLDGETIFHLNPSGRFVIGGPQGEAGLTGGKIIIDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVARGLANRALVQVSYAIGVSHPLSVFVDSYGTAQGGRTDEDLLAISKSNF 344          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 9.540e-66
Identity = 114/207 (55.07%), Postives = 157/207 (75.85%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PE +PLT++LA KL A ++  R++ + PWLRPD KTQVT+EY  E GA++P+RV T+++S QH ++++ E +  ++ E +IKP +PAH LDE+T++H+ PSGRFV+GGP GDAGLTGRKII+DTY             KD +KVDRSAAY  R  AKS+VA+GLARRCLVQ+SYAIGV EPLS+FV+TYGT   +  +++ +I++NF
Sbjct:  134 PEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHADSISTEDLRSEILEKIIKPTVPAHLLDEKTVYHIQPSGRFVVGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYSKVDRSAAYAARWIAKSLVAAGLARRCLVQLSYAIGVAEPLSIFVNTYGTSSKTSAELVEIIRKNF 340          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.246e-65
Identity = 124/206 (60.19%), Postives = 153/206 (74.27%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MPLT+VLA KL A+L E+R+N T PWLRPD KTQVTV+Y  + GA++P RVHT++IS QHDE V  +++ + LKE VIK V+PA +LDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AKS+V  GL RR LVQVSYAIGV  PLS+ +  YGT + S++++L ++K+NF
Sbjct:  148 ECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNF 353          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 1.246e-65
Identity = 124/206 (60.19%), Postives = 153/206 (74.27%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MPLT+VLA KL A+L E+R+N T PWLRPD KTQVTV+Y  + GA++P RVHT++IS QHDE V  +++ + LKE VIK V+PA +LDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AKS+V  GL RR LVQVSYAIGV  PLS+ +  YGT + S++++L ++K+NF
Sbjct:  148 ECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNF 353          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.246e-65
Identity = 124/206 (60.19%), Postives = 153/206 (74.27%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MPLT+VLA KL A+L E+R+N T PWLRPD KTQVTV+Y  + GA++P RVHT++IS QHDE V  +++ + LKE VIK V+PA +LDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AKS+V  GL RR LVQVSYAIGV  PLS+ +  YGT + S++++L ++K+NF
Sbjct:  148 ECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNF 353          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.246e-65
Identity = 124/206 (60.19%), Postives = 153/206 (74.27%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MPLT+VLA KL A+L E+R+N T PWLRPD KTQVTV+Y  + GA++P RVHT++IS QHDE V  +++ + LKE VIK V+PA +LDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AKS+V  GL RR LVQVSYAIGV  PLS+ +  YGT + S++++L ++K+NF
Sbjct:  148 ECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNF 353          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.125e-65
Identity = 123/206 (59.71%), Postives = 152/206 (73.79%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MPLT+VLA KL A+L E+R+N T PWLRPD KTQVTV+Y  + GA++P RVHT++IS QHDE V  +++ + LKE +IK V+PA +LDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AKS+V  GL RR LVQVSYAIGV  PLS+ +  YGT + S++++L ++K NF
Sbjct:  148 ECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVIPIRVHTIVISVQHDEEVCLDEMRDALKEKLIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKNNF 353          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.055e-64
Identity = 118/206 (57.28%), Postives = 152/206 (73.79%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MPLT+VLA KL  R+ ++R++   PWLRPD KTQVTV+Y  + GA++P R+HT++IS QH+E +T E + E LKE VIK V+PA +LDE T++HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDRSAAY  R  AKS+V +GL RR LVQVSYAIGV EPLS+ + TYGT   +++++L ++ +NF
Sbjct:  149 ECMPLTIVLAHKLNTRIADLRRSGVLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEAMQEALKEQVIKAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSNKTERELLEVVNKNF 354          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTTA1.853e-7769.57S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK_DICDI5.774e-7165.70S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_ACACA2.054e-6864.59S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK_SCHPO9.540e-6655.07S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK2_PONAB1.246e-6560.19S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE1.246e-6560.19S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA1.246e-6560.19S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN1.246e-6560.19S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_RAT2.125e-6559.71S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK1_MOUSE1.055e-6457.28S-adenosylmethionine synthetase isoform type-1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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