DR403185

Overview
NameDR403185
Unique NameDR403185
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig248 contig Csv1_Contig248:1..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: CP17A_MESAU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocricetus auratus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 48/153 (31.37%), Postives = 78/153 (50.98%), Query Frame = 3
Query:  186 PQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAAS----------NPLNLSEVMRSLTSTIICRIGFGKRYDD 614
            P V+F++L  KYGP+ SLRLG   ++++   +LAKE+L     +F  RP +V    LS  G  +AF+   G W+  RK+          + +F   R+   ++ +EKI    A+S            ++LSE + +  + IIC I FG  Y++
Sbjct:   49 PHVNFFKLQEKYGPIYSLRLGSTTTVIIGQYQLAKEVLVKKGKEFSGRPHMVTLGLLSDQGKGIAFADSGGSWQLHRKLA---------LSSFALFRDG--NQKLEKIICQKASSLCDFLLTHNEESIDLSEPIFNSITNIICIICFGISYEN 190          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 38/140 (27.14%), Postives = 80/140 (57.14%), Query Frame = 3
Query:  204 ELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAAS-NPLNLSEVMRSLTSTIICRIGFGKRYDDDK 620
            +L++++  ++ LR+     +V+SS +LAKE+L T  ++F SR   V     +  G D+ F+ Y  +WR++R+I  +  F +  V+ +R   E E + +++ + K+  AS N + +   ++ +   I+ RI F +R++ ++
Sbjct:   60 DLAKRFAEILLLRMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRLQLMMYNIMYRIMFDRRFESEE 199          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 39/140 (27.86%), Postives = 80/140 (57.14%), Query Frame = 3
Query:  204 ELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSV-AASNPLNLSEVMRSLTSTIICRIGFGKRYDDDK 620
            +L++++G +  LR+G    +VVSS +LAKE+L T  ++F SR   V     +  G D+ F+ Y  +WR++R+I  +  F +  V+ +R   E E + +++ + ++  AA+  + L   ++ +    + RI F +R++ ++
Sbjct:   60 DLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVRRNPDAAAGGIVLRRRLQLMMYNNMYRIMFDRRFESEE 199          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 46/172 (26.74%), Postives = 80/172 (46.51%), Query Frame = 3
Query:  177 VSKPQVSFWELSRKYGP--LMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAASNPLNLSEVMRSLTSTIICRIGFGKRYDDDKATSARSRFHALLNETQALFVSF 686
            V  P      L+R +G   LMS  LG  P+++ S  ++A+E+L +    F +RP     Q+L + G  + F+P  GYWR +R+I   HLF   R+      R+ +V  M++ I K   +   + +   ++      I    FG+R+D         +   +++E   L  +F
Sbjct:   96 VGLPHRKLESLARLHGAKQLMSFSLGCTPAVITSDPEVARELLTSP--HFANRPLKQSAQQLLF-GRAIGFAPNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQKEYHSKGVVRVRRHLQGAALNNIMGSVFGRRFDMSHENEEVKKLREMVDEGFQLLGAF 264          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 43/154 (27.92%), Postives = 77/154 (50.00%), Query Frame = 3
Query:  186 PQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPA-----LVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAASNPLNLSEVMRSLTSTIICRIGFG---KRYDDDKA 623
            P  SF +L++ YGP+MSL+ G + S+V++S + A+E+L+THD     R +       G +++S     +   P    WR +RK+ V  +F   R E  + +R  +V  ++  +++S      +++S    +    II  I F      YD  K+
Sbjct:   58 PHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSV----IWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNIISNILFSVDLGSYDSKKS 207          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: CP17A_PERLE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromyscus leucopus GN=Cyp17a1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  192 VSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICV--IHLFDSNRVENFRPIREDEVSRMIEKI----SKSVAASNPLNLSEVMRSLTSTIICRIGFGKRYD--DDKATSARSRFHALLN 659
            V+F++L  KYGP+ SLRLG +P++++   +LA+E+L     +F  RP +V    LS  G  +AF+  D  W+  RK+ +    LF     +    I   E S + + +     +SV  S P+ +S       + IIC I F   Y+  D   T+ ++    +LN
Sbjct:   51 VNFFKLQEKYGPIYSLRLGTIPTVIIGQYQLAREVLIKKGKEFSGRPQMVTLGLLSNQGKGIAFADSDDAWQLHRKLALSSFALFRDGD-QRLETIICQEASSLCDLLLTHNEESVDLSQPIFMS------VTNIICAICFSTSYENRDPILTTIQTFTEGILN 207          
The following BLAST results are available for this feature:
BLAST of DR403185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
CP17A_MESAU2.830e-1131.37Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocr... [more]
TCMO_PEA3.697e-1127.14Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_GLYEC3.697e-1127.86Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C78A4_PINRA6.305e-1126.74Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C76C4_ARATH6.305e-1127.92Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
CP17A_PERLE8.235e-1130.49Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromy... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244B14 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244B14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403185 ID=DR403185; Name=DR403185; organism=Citrus sinensis; type=EST; length=693bp
GGGGAAGCGCATAGAAGATATTAATGGCTTTACTTATCATCATCAACTTC
CTTTTGTGTCTCCCCTTCTTCCTCTTCTTCTTTGCTTTGCAAAGGCTCAT
AACCTCAAGAAATAATACTAAATTACCACCCGGCCCCTGGGGCCTTCCCT
TAATCGGTAACTTACACCAGTTTGATGTCTCAAAGCCTCAAGTGTCATTT
TGGGAGCTGTCACGGAAATATGGCCCCCTCATGTCCTTGCGTCTTGGTTT
TGTGCCATCCCTAGTAGTTTCCTCAGCAAAACTGGCTAAAGAGATATTAA
AAACCCATGACCTTCAATTTTGTAGCAGGCCAGCCTTGGTAGGACAACAA
AAGTTATCTTACAATGGTCTTGATTTGGCGTTTTCACCCTATGATGGTTA
TTGGAGAGAGATAAGAAAAATTTGTGTCATTCATCTCTTTGACTCTAACA
GGGTAGAAAATTTTCGACCCATTAGAGAAGATGAAGTTTCAAGAATGATT
GAAAAGATTTCAAAATCAGTTGCTGCTTCTAATCCCTTAAACTTAAGTGA
GGTAATGAGGTCTCTTACAAGCACCATTATTTGTAGAATTGGATTTGGCA
AGAGGTATGATGACGATAAAGCAACAAGTGCAAGAAGTAGATTCCATGCC
CTGCTTAATGAAACTCAAGCCTTGTTTGTAAGCTTTTTTGTTA
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