DR403185

Overview
NameDR403185
Unique NameDR403185
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig248 contig Csv1_Contig248:1..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.556e-30
Identity = 64/152 (42.11%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  165 HQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAASNPLNLSEVMRSLTSTIICRIGFGKRYDDDK 620
            HQ  +  P  S   LS +YGPLM L  G VP LVVSS + A+E+LKTHD +F +RP       L   G D+ F+PY  YWR+++ +C+++L  +  VE+F  +REDEV+ MIEK+ K+ ++S+  NLSE+  +L S +  R+  G+++ +D+
Sbjct:   47 HQLSLH-PHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALGRKHSEDE 197          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.644e-30
Identity = 62/144 (43.06%), Postives = 96/144 (66.67%), Query Frame = 3
Query:  195 SFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAAS--NPLNLSEVMRSLTSTIICRIGFGKRYDDDK 620
            S   LS +YGPLM L  G  P L+VSSA +A +++KTHDL   +RP      K+   G D+AF+PY  YWR+++ IC+ +L ++  V ++  IRE+E+ RMIEK+ K+  +S  +P+NLS+++ +LT+ IICR+  G++Y   K
Sbjct:   55 SLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDIICRVALGRKYSGKK 198          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30
Identity = 63/142 (44.37%), Postives = 96/142 (67.61%), Query Frame = 3
Query:  195 SFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSV--AASNPLNLSEVMRSLTSTIICRIGFGKRYDD 614
            S  ++S++YGP+M L  G VP ++VSS + A+E+LKTHDL+ CSRP  VG    +YN  D+ F+PY   WRE+RKI V  LF   ++++FR IREDE   ++ K+SKS     ++ +NL +V+ +  ++IICR+ FG+ + D
Sbjct:   51 SLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFGQNFCD 192          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.351e-29
Identity = 65/174 (37.36%), Postives = 106/174 (60.92%), Query Frame = 3
Query:  186 PQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAASNPLNLSEVMRSLTSTIICRIGFG------KRYDDDKATSARSRFHALLNETQALFVSFF 689
            P   F  LS+K+GP+M L  GFVP +V+SS + A+E LKT DL+ CSRP  V  + +SYN  D+ F+PY   W+ +RK+ V+ L ++ + ++FR IRE+E   +I+K+++S    +P+NL + + +L ++I+CR+ FG      +  D+D      ++F  L+      F  FF
Sbjct:   52 PHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLVASIVCRLAFGVNIHKCEFVDEDNVADLVNKFEMLV--AGVAFTDFF 223          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 65/143 (45.45%), Postives = 92/143 (64.34%), Query Frame = 3
Query:  180 SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAASNPLNLSEVMRSLTSTIICRIGFGKRY 608
            S P     +L++KYGPLM L+LG V  ++VSSA+ AKE++KTHD+ F SRP  +    + Y   D+ FSPY  YWR++RKIC + L    RV++  PIRE+EV  +I++I+      + +NLS+ + SL  TI  R  FGKRY
Sbjct:   38 SPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASE--EGSVVNLSQAIDSLIFTITSRSAFGKRY 178          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 63/172 (36.63%), Postives = 108/172 (62.79%), Query Frame = 3
Query:  192 VSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAASNPLNLSEVMRSLTSTIICRIGFGKR------YDDDKATSARSRFHALLNETQALFVSFF 689
            ++ W++   +GP+M L+LG+VP +V+SS + A+E+LKTHDL  CSRP  +  + +SYN  D+ F+PY   WR +RK+ VI LF   +  +FR IRE+E   +++K+S++    +P+NL + + +L+++I+CR+ FG+        D+D      SR   +  + +  F +FF
Sbjct:   56 LNLWKI---HGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIVCRLAFGQNLHESEFIDEDSMEDLASRSEKI--QAKFAFSNFF 222          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.305e-29
Identity = 63/152 (41.45%), Postives = 97/152 (63.82%), Query Frame = 3
Query:  165 HQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAASNPLNLSEVMRSLTSTIICRIGFGKRYDDDK 620
            HQ  +  P  S   LS +YGPLM L  G VP LVVSS + A+E+LKTHDL+F +RP       L   G D+ F PY  YWR+++ +C+++L  +  V +F  IRE+E++ MI+K+ K+ ++S+  NLSE+  +L S +  RI  G+++ +D+
Sbjct:   47 HQLSLH-PHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSELFVTLPSDVTSRIALGRKHSEDE 197          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.010e-29
Identity = 59/140 (42.14%), Postives = 94/140 (67.14%), Query Frame = 3
Query:  195 SFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAASNPLNLSEVMRSLTSTIICRIGFGKRYDD 614
            SF +LS+ YGP+M L  G VP +VVS+ + A+E+LKTHDL+ C+RP L   +  SYN  D+ F+ Y   WRE+RK+ ++ LF S +++ FR IRE+E   ++ K+SKS      ++L + + S T++I+CR+ FG+ + +
Sbjct:   51 SFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHE 190          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.010e-29
Identity = 60/141 (42.55%), Postives = 95/141 (67.38%), Query Frame = 3
Query:  186 PQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSVAASNPLNLSEVMRSLTSTIICRIGFGKRY 608
            P  S   LS +YGPLM L  G VP +V S+A+ A+++LKTHD  F SRP     +KL Y   ++A +PY  YWR+++ + V+HL  +  V +F+ +R++E++ M+E I KS  +S P+NLS+++ SLT+ +ICR+  G++Y
Sbjct:   49 PHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKS--SSKPVNLSKILSSLTNDVICRVALGRKY 187          
BLAST of DR403185 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.931e-29
Identity = 62/140 (44.29%), Postives = 99/140 (70.71%), Query Frame = 3
Query:  195 SFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDGYWREIRKICVIHLFDSNRVENFRPIREDEVSRMIEKISKSV--AASNPLNLSEVMRSLTSTIICRIGFGKRY 608
            SF ++S++YGP++ LRLG VP +VVSS + A+E+LKTHDL+ C+RP        +YN  D+ F+P+   WRE+RKI  + LF   ++++FR IRE+E   +++KISKSV    ++ ++L +V+ S T++IICR+ FG+ +
Sbjct:   51 SFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQNSSVDLRKVLFSFTASIICRLAFGQNF 190          
The following BLAST results are available for this feature:
BLAST of DR403185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
C71AD_ARATH3.556e-3042.11Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH4.644e-3043.06Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH7.921e-3044.37Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71B7_ARATH1.351e-2937.36Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71DB_LOTJA1.765e-2945.45Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71BN_ARATH1.765e-2936.63Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH2.305e-2941.45Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH3.010e-2942.14Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH3.010e-2942.55Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71BZ_ARATH3.931e-2944.29Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAF-PNP1244B14 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244B14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403185 ID=DR403185; Name=DR403185; organism=Citrus sinensis; type=EST; length=693bp
GGGGAAGCGCATAGAAGATATTAATGGCTTTACTTATCATCATCAACTTC
CTTTTGTGTCTCCCCTTCTTCCTCTTCTTCTTTGCTTTGCAAAGGCTCAT
AACCTCAAGAAATAATACTAAATTACCACCCGGCCCCTGGGGCCTTCCCT
TAATCGGTAACTTACACCAGTTTGATGTCTCAAAGCCTCAAGTGTCATTT
TGGGAGCTGTCACGGAAATATGGCCCCCTCATGTCCTTGCGTCTTGGTTT
TGTGCCATCCCTAGTAGTTTCCTCAGCAAAACTGGCTAAAGAGATATTAA
AAACCCATGACCTTCAATTTTGTAGCAGGCCAGCCTTGGTAGGACAACAA
AAGTTATCTTACAATGGTCTTGATTTGGCGTTTTCACCCTATGATGGTTA
TTGGAGAGAGATAAGAAAAATTTGTGTCATTCATCTCTTTGACTCTAACA
GGGTAGAAAATTTTCGACCCATTAGAGAAGATGAAGTTTCAAGAATGATT
GAAAAGATTTCAAAATCAGTTGCTGCTTCTAATCCCTTAAACTTAAGTGA
GGTAATGAGGTCTCTTACAAGCACCATTATTTGTAGAATTGGATTTGGCA
AGAGGTATGATGACGATAAAGCAACAAGTGCAAGAAGTAGATTCCATGCC
CTGCTTAATGAAACTCAAGCCTTGTTTGTAAGCTTTTTTGTTA
back to top