CX046736

Overview
NameCX046736
Unique NameCX046736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3410 contig Csv1_Contig3410:139..932. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_KLULA (Nascent polypeptide-associated complex subunit alpha OS=Kluyveromyces lactis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.819e-24
Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = -3
Query:  202 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASKPES-SAMVQ----------------DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 600
            +LKLG+KPI GVSRVT KK    +F I +P+V+KS   + ++VFGEAK++D + +L   Q    +   V P     V+  P+S  A +Q                DD EVDETG+   DIELVM QAGVPR++A KALK  D DIV+AIM L+
Sbjct:   24 ILKLGLKPIQGVSRVTFKKKDGQIFAIDRPEVYKSQGGN-FVVFGEAKVDDFTQRLAKAQESLQQNEGVLPAGQDAVSKDPQSIQADMQAAADSATDKPSADDAVDDAEVDETGLNADDIELVMQQAGVPRAKAAKALKEHDSDIVNAIMALS 175          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_USTMA (Nascent polypeptide-associated complex subunit alpha OS=Ustilago maydis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.202e-24
Identity = 59/142 (41.55%), Postives = 88/142 (61.97%), Query Frame = -3
Query:  211 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPP-----------NTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIM 603
            A+  +G+K + G++RVT+++ +  L+VI++P+V+KS  SD YIVFGEAK ED+S   Q QAA+Q                 ++ + A K        DD  +DE GV+ KDI+LVM Q    R +AVKALK ++GD+++AIM
Sbjct:   46 ALQGIGLKKVGGITRVTMRRPRGHLYVIAQPEVYKSSHSDVYIVFGEAKAEDMSQLAQAQAAQQMAQAEAQERLLAESLQNSSASGAEKKVEEEEEDDDSPIDEEGVDAKDIDLVMQQVSCSRRKAVKALKESNGDLINAIM 187          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_LODEL (Nascent polypeptide-associated complex subunit alpha OS=Lodderomyces elongisporus GN=EGD2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.316e-23
Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQF---------------KVPPPNTGNV------ASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            KLG+K I G+SRVT K+  N+++ I  P+V++S    TY+VFGEAK++D++ ++   Q Q A+Q                K P   T ++        +  + A   D+EEVDETG+ PKDI+L++ Q  V R  AVKALK  DGD+V+A+MEL+
Sbjct:   29 KLGLKQIKGISRVTFKQRGNLIYAIDAPEVYRSQAG-TYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGAAGDDKSPEAITADLEKASLQGGESNADAAEDDNEEVDETGINPKDIDLIVEQTRVSRGSAVKALKKHDGDMVNALMELS 182          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_BABDI (Nascent polypeptide-associated complex subunit alpha OS=Babesia divergens PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.184e-22
Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASK--PESSAMVQDD----------------EEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            KLGMKP+ GV++V +KKSK I FV++KPDV+K P SDTY++FGEAK+ED+S     +AA++          V +    +SSA                      + DE+ V   DI+LV++Q G  R +AV+AL    GDIV  IM+L+
Sbjct:   48 KLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGEAKVEDMSQNSALEAAQRLSQLSSALQAVGADRGTDSSAAAHASGHDHAHDHDHSHGDCASKADESSVNQSDIDLVVSQVGCTREQAVEALIKNKGDIVETIMQLS 196          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_CANAL (Nascent polypeptide-associated complex subunit alpha OS=Candida albicans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.547e-22
Identity = 61/152 (40.13%), Postives = 94/152 (61.84%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQF--------------KVPPPNTGNVASKPESSAMVQDDEE----VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            KL +K I G+SRVT K+  N+++ I  PDV++S  + TY+VFGEAK++D++ ++   Q Q A+Q               K P   T ++          +D+EE    +DETG++PKDIE+V+ Q  V R++AVKAL+  DGD+V+AIM+L+
Sbjct:   28 KLNLKQIKGISRVTFKQRGNLIYAIDSPDVYRS-AAGTYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGKTEDKSPEAITADLEKASLGDKKAEDEEEDEGEIDETGLDPKDIEIVVEQTQVSRAKAVKALRNHDGDMVNAIMDLS 178          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_ASHGO (Nascent polypeptide-associated complex subunit alpha OS=Ashbya gossypii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.878e-22
Identity = 61/143 (42.66%), Postives = 91/143 (63.64%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASK------PESSAMVQDDEE---VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            K  MKP+PG++RVT +K  N +F I  PDV+K+   + Y+VFGE K++D + +L   Q QAA   K P     ++A+       P + A   +++E   VDE+G++ +DIELVM QA V R++AVKAL+  + DIV+AIM L+
Sbjct:   26 KFSMKPMPGITRVTFRKKNNQIFAIDNPDVYKTQGGN-YVVFGEPKVDDFTRRLARAQQQAASAAKDPQSIQADMAAAAAAPAAPAAPAAAPEEDEAGQVDESGLDGQDIELVMQQANVSRNKAVKALREHNSDIVNAIMSLS 167          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_DEBHA (Nascent polypeptide-associated complex subunit alpha OS=Debaryomyces hansenii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.309e-21
Identity = 59/154 (38.31%), Postives = 95/154 (61.69%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPP--NTGNVASKPESSAMVQ------------------DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            KL +K I G++RVT K+  N+++ I +PDVF+S ++ TY+VFGEAK++D++ ++   Q Q A+Q  +      TG    + +S   +                   DD EVDE+G++ KDI++++ Q  V R++AVKAL+  DGD+V+AIMEL+
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDQPDVFRS-SAGTYVVFGEAKVDDMNKRIAEAQQQQAQQDALSKAAGETGEAGEEDKSQDAITADLEKASLNTNKIEEEEADDGEVDESGLDAKDIDIIVEQTQVSRAKAVKALRVHDGDMVNAIMELS 180          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_SCHPO (Nascent polypeptide-associated complex subunit alpha OS=Schizosaccharomyces pombe GN=egd2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21
Identity = 59/141 (41.84%), Postives = 92/141 (65.25%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL------QTQAAEQFKVPPPNTGNVASKPESSAMVQDDEE----VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            KLG+K + G++RV +++ KNIL +I++P V+KS +++ YIV G+  +ED+++Q       Q QA E  +       +  ++P  +A +++  E    VDETGV+ KDIELVM QA V R++AV ALK  + D+V+AIM LT
Sbjct:   33 KLGLKRVEGITRVAMRRPKNILLIINEPIVYKS-SNNAYIVLGKVTVEDMAAQARAFNESQKQATETKEEAAITEESGDAQPADTAKIEESFEQEKAVDETGVDAKDIELVMAQANVSRAKAVTALKENNSDVVNAIMSLT 172          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_PICST (Nascent polypeptide-associated complex subunit alpha OS=Pichia stipitis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.976e-21
Identity = 59/150 (39.33%), Postives = 95/150 (63.33%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL-QTQAA----------------EQFKVPPPNTGNV--ASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            KL +K I G++RVT K+  N+++ I  PDV++S  + TY+VFGEAK++D++ ++   QAA                E+ K P   T ++  AS  E     +++ EVDE+G++ KDI++++ Q  V R++AVKAL+  DGD+V+AIMEL+
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDAPDVYRS-AAGTYVVFGEAKVDDMNQRIADAQAAQAAETDAHAGHTHSHGEEDKSPEAITADLEKASLTEKIEEEEEEGEVDESGLDAKDIDIIVEQTQVSRAKAVKALRKHDGDMVNAIMELS 176          
BLAST of CX046736 vs. ExPASy Swiss-Prot
Match: NACA_YEAST (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae GN=EGD2 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = -3
Query:  202 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQT--QAAEQFKVPPPNTGNVASKPE--------------SSAMVQDDEE--VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 594
            KLG+K IPG+ RVT +K  N ++ I KP+VF+S     Y+VFGEAK+++ + +L    Q A+   + P N       PE              ++A  +DDEE  VD   +   DIELV+ Q  V +++A+KALKA +GD+V+AIM L+
Sbjct:   26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQAIKALKAHNGDLVNAIMSLS 173          
The following BLAST results are available for this feature:
BLAST of CX046736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_KLULA2.819e-2445.75Nascent polypeptide-associated complex subunit alp... [more]
NACA_USTMA8.202e-2441.55Nascent polypeptide-associated complex subunit alp... [more]
NACA_LODEL5.316e-2340.65Nascent polypeptide-associated complex subunit alp... [more]
NACA_BABDI1.184e-2240.94Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANAL1.547e-2240.13Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASHGO5.878e-2242.66Nascent polypeptide-associated complex subunit alp... [more]
NACA_DEBHA1.309e-2138.31Nascent polypeptide-associated complex subunit alp... [more]
NACA_SCHPO2.234e-2141.84Nascent polypeptide-associated complex subunit alp... [more]
NACA_PICST4.976e-2139.33Nascent polypeptide-associated complex subunit alp... [more]
NACA_YEAST4.212e-2039.60Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_9H07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9H07-P13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046736 ID=CX046736; Name=CX046736; organism=Citrus sinensis; type=EST; length=794bp
GCATAACAACATTCTTAGTAAAAGCTGTTTCATGCTGATACACAAGGGAA
AAAGAGGGGAAAAAAAAGAGAGAAAAGTTATAAAGCCAGCAAAAATCTGC
AACTTCAATTGTAAATGGTAACAGCGAGAAAAAAAAAAAAAAAAGATTTC
CTTATGGGATCATTCAGCAGAGCAACATAATTAAGAAAGTGACCATCAAT
TTGTTAGCTCCATAATGGCAGAAACGATGTCACCATCTGCGGCTTTGAGT
GCTTTCACAGCCCTTGACCTCGGTACCCCAGCTTGAGTCATTACCAACTC
AATGTCCTTTGGCTCCACACCAGTCTCATCTACTTCTTCGTCATCTTGAA
CCATGGCCGATGACTCAGGCTTTGATGCCACATTACCTGTGTTAGGAGGA
GGGACCTTGAACTGCTCTGCAGCCTGAGTTTGCAGTTGTGAACTCAGATC
CTCGATCTTTGCTTCCCCAAAGACAATGTATGTGTCAGATGTAGGACTCT
TGAAAACATCTGGTTTGGAGATAACAAACAAAATATTTTTGCTCTTTTTA
ACTGTAACTCGACTGACGCCAGGGATTGGCTTCATTCCAAGTTTCAACAT
TGCTTTCCGACTCTTCTTTTCACTCCTGCTCTGTTTTGAGCGACCACTTC
CATCTCCTTTCCCTTCCACATCGTCTTCATCCTTGTCATCATCCTCATCC
TCCTCATCATCATCCTCATCATCGTCGTCCTCGACTACAGGCTCATCGGG
GTTGAGCTTTTGCTCTTCAAGATGGGCAGCGAGGAGCTCTTCTT
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