CX046735

Overview
NameCX046735
Unique NameCX046735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3410 contig Csv1_Contig3410:60..915. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_MOUSE (Nascent polypeptide-associated complex subunit alpha OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.504e-39
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_HUMAN (Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.504e-39
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_BOVIN (Nascent polypeptide-associated complex subunit alpha OS=Bos taurus GN=NACA PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.504e-39
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACAM_MOUSE (Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.504e-39
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct: 2051 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_XENLA (Nascent polypeptide-associated complex subunit alpha OS=Xenopus laevis GN=naca PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.806e-39
Identity = 84/136 (61.76%), Postives = 105/136 (77.21%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDE GVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   77 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGETVSNIQENTQTPTVQEESEEEEVDEAGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 212          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_PONAB (Nascent polypeptide-associated complex subunit alpha OS=Pongo abelii GN=NACA PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.271e-38
Identity = 84/136 (61.76%), Postives = 105/136 (77.21%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDET VE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETDVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_CHILA (Nascent polypeptide-associated complex subunit alpha OS=Chinchilla lanigera PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.608e-38
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIE VM+QA V R++AV+ALK    +IV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIEWVMSQANVSRAKAVRALKNNSNNIVNAIMELT 214          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_DROME (Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.283e-37
Identity = 83/138 (60.14%), Postives = 104/138 (75.36%), Query Frame = 1
Query:  274 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMV-----QDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            MLKLG+K I GV+RVT++KSKNILFVI+ PDV+K+P SDTYIVFGEAKIEDLS Q Q  AAE+FK   P     A    ++  V     +D+E+VD+TGV+ KDIELV+TQA   R++A+KALK  + DIV+AIMELT
Sbjct:   80 MLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFKA--PEAAGAADSVGATTSVAPIAEEDEEDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELT 215          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACAD_HUMAN (NAC-alpha domain-containing protein 1 OS=Homo sapiens GN=NACAD PE=2 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 3.626e-36
Identity = 83/142 (58.45%), Postives = 105/142 (73.94%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNV---ASKPE-----SSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            AM KLG++ I GV+R+T++KSKNILFVI+KPDVFKSP SDTY+VFGEAKIEDLS Q+   AAE+FKVP   +  V   A +P           +++EEVDE G+E +DIELVM QA V R++AV+AL+    DIV+AIMELT
Sbjct: 1420 AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGLELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELT 1561          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACP1_HUMAN (Putative nascent polypeptide-associated complex subunit alpha-like protein OS=Homo sapiens GN=NACAP1 PE=5 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.078e-36
Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            A  KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTY+VFGEAKIEDLS + Q  AAE+FKV      N+    ++  + +  +DEEVDETGVE KDIELV++QA V  ++AV+ALK ++ DIV+AIMELT
Sbjct:   78 ARFKLGLQQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYMVFGEAKIEDLSQEAQLAAAEKFKVQGEAVSNIQENTQTPTVQEGSEDEEVDETGVEIKDIELVLSQANVWGAKAVRALKNSN-DIVNAIMELT 212          
The following BLAST results are available for this feature:
BLAST of CX046735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_MOUSE3.504e-3962.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_HUMAN3.504e-3962.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOVIN3.504e-3962.50Nascent polypeptide-associated complex subunit alp... [more]
NACAM_MOUSE3.504e-3962.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_XENLA7.806e-3961.76Nascent polypeptide-associated complex subunit alp... [more]
NACA_PONAB2.271e-3861.76Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHILA6.608e-3861.03Nascent polypeptide-associated complex subunit alp... [more]
NACA_DROME4.283e-3760.14Nascent polypeptide-associated complex subunit alp... [more]
NACAD_HUMAN3.626e-3658.45NAC-alpha domain-containing protein 1 OS=Homo sapi... [more]
NACP1_HUMAN8.078e-3659.56Putative nascent polypeptide-associated complex su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_9H07_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9H07-P13-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046735 ID=CX046735; Name=CX046735; organism=Citrus sinensis; type=EST; length=856bp
TTTAGTCTTCTCTCTTTCGTGTCCGCTTCTCGTTCTCAAGTCTCAACACC
CAGCCCAAAAAAAATGACTGCTCAGTCTCAAGAAGAGCTCCTCGCTGCCC
ATCTTGAAGAGCAAAAGCTCAACCCCGATGAGCCTGTAGTCGAGGACGAC
GATGATGAGGATGATGATGAGGAGGATGAGGATGATGACAAGGATGAAGA
CGATGTGGAAGGGAAAGGAGATGGAAGTGGTCGCTCAAAACAGAGCAGGA
GTGAAAAGAAGAGTCGGAAAGCAATGTTGAAACTTGGAATGAAGCCAATC
CCTGGCGTCAGTCGAGTTACAGTTAAAAAGAGCAAAAATATTTTGTTTGT
TATCTCCAAACCAGATGTTTTCAAGAGTCCTACATCTGACACATACATTG
TCTTTGGGGAAGCAAAGATCGAGGATCTGAGTTCACAACTGCAAACTCAG
GCTGCAGAGCAGTTCAAGGTCCCTCCTCCTAACACAGGTAATGTGGCATC
AAAGCCTGAGTCATCGGCCATGGTTCAAGATGACGAAGAAGTAGATGAGA
CTGGTGTGGAGCCAAAGGACATTGAGTTGGTAATGACTCAAGCTGGGGTA
CCGAGGTCAAGGGCTGTGAAAGCACTCAAAGCCGCAGATGGTGACATCGT
TTCTGCCATTATGGAGCTAACAAATTGATGGTCACTTTCTTAATTATGTT
GCTCTGCTGAATGATCCCATAAGGAAATCTTTTTTTTTTTTTTTTCTCGC
TGTTACCATTTACAATTGAAGTTGCAGATTTTTGCTGGCTTTATAACTTT
TCTCTCTTTTTTTTCCCCTCTTTTTCCCTTGTGTATCAGCATGAAACAGC
TTTTAC
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