CX046735

Overview
NameCX046735
Unique NameCX046735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3410 contig Csv1_Contig3410:60..915. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_YEAS7 (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae (strain YJM789) GN=EGD2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.758e-20
Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 1
Query:  280 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQT--QAAEQFKVPPPNTGNVASKPE--------------SSAMVQDDEE--VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            KLG+K IPG+ RVT +K  N ++ I KP+VF+S     Y+VFGEAK+++ + +L    Q A+   + P N       PE              ++A  +DDEE  VD   +   DIELV+ Q  V +++A+KALKA +GD+V+AIM L+
Sbjct:   26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQAIKALKAHNGDLVNAIMSLS 173          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_DICDI (Nascent polypeptide-associated complex subunit alpha OS=Dictyostelium discoideum GN=nacA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.758e-20
Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQ-----TQAAEQFKVPPPNTGNVASKPESSAMV-QDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            AM KLG+ P+  + RVT+K+ + +L V+++P+V+ SP+ +TY+VFG+   +D++S+LQ         +  K   P    V    ES  +V Q  +  D  GV PKD+E+VM +    R + V+ L A   D+VSA++ELT
Sbjct:   19 AMKKLGLAPVSDIFRVTIKQKEGVLVVVAEPEVYASPSGETYVVFGDHSFDDIASRLQKAVPKANVDDIVKAAMPAPTAVKESEESEEIVAQAVDSFDYKGVNPKDVEVVMKETKASREKVVETLIATKNDLVSAVLELT 158          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_VANPO (Nascent polypeptide-associated complex subunit alpha OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=EGD2 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.060e-19
Identity = 54/144 (37.50%), Postives = 87/144 (60.42%), Query Frame = 1
Query:  280 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQT-------------QAAEQFKVPPPNTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            KLG+K I G++RVT +K  N +F I  P+V++S   + Y+VFGEAKI++ S +L               +  +  ++     G+ ++KP ++A   D+  VD   +  +DIELV +QA V +++A+KALK  +GDIV+AIM L+
Sbjct:   26 KLGLKKIAGINRVTFRKKDNQIFAIDNPEVYRSQGGN-YVVFGEAKIDNFSQKLAAAQEKIQSVSKSPEEIQKDMQLAADQAGDESAKPAAAAEEDDEAPVDAGDLSAEDIELVASQANVSKNKAIKALKEHNGDIVNAIMALS 168          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_YARLI (Nascent polypeptide-associated complex subunit alpha OS=Yarrowia lipolytica GN=EGD2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.808e-19
Identity = 56/158 (35.44%), Postives = 90/158 (56.96%), Query Frame = 1
Query:  280 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQ--AAEQFKVPPPNTGNV-------------ASKPESSAM-------------VQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMEL 669
            KL ++ + G++RV +K+++  +FVI+ P+V+K+PT ++Y+VFGEA+ ED+ +  +    AA Q +     TG+V             ASK  +S                +D+ E D TG+E  DI+LVM QA V R++A+  LK  D D+V+ IM+L
Sbjct:   39 KLNLQKVEGITRVVLKRTRQHIFVIANPEVYKTPTGNSYVVFGEAQHEDMQATARAAQIAAAQAQQAAAETGSVSEAAAAGEVGAELASKDPASITADLEAASLSKDEDAEDEAEADATGLEDSDIKLVMEQANVSRNKAINGLKKNDSDVVNTIMDL 196          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_CRYNE (Nascent polypeptide-associated complex subunit alpha OS=Cryptococcus neoformans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.410e-18
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  271 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQ----------------FKVPPPNT---------GNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMEL 669
            A+  LG+K + G+ RVT+++++N+L V+S P+V+KSP SD YIVFGEAK+ED +S  Q QA  Q                FK   P +            +S P  S    D     +  V  ++I+L++ Q GV  ++A +A  +  GD+++AIM+L
Sbjct:   33 ALEGLGLKRVQGIQRVTLRRARNVLLVVSSPEVYKSPGSDCYIVFGEAKVEDPNSAAQLQAQAQLAASSQAAQQAHAHGGFKEGVPKSLEELMQDAPSTDSSAPAPSGEATDASASGDFKVSDEEIQLIVAQTGVDEAKAREAYISEKGDLINAIMKL 190          
BLAST of CX046735 vs. ExPASy Swiss-Prot
Match: NACA_CANGA (Nascent polypeptide-associated complex subunit alpha OS=Candida glabrata GN=EGD2 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.410e-18
Identity = 53/142 (37.32%), Postives = 85/142 (59.86%), Query Frame = 1
Query:  280 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASKPESSAMVQD--------DEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 672
            KLG+K +PG+ RVT +K  N +F I KP+VF+S     Y+VFGEAK+++ + +L   Q QA  Q     P   ++ +  +++A+  +        +E+VD   +   DI+LV+ Q    + +A+KALK  +GDIV+AIM L+
Sbjct:   26 KLGLKKVPGIIRVTFRKKDNQIFAIEKPEVFRS-VGGNYVVFGEAKVDNFTQRLAAAQQQAQSQTATKTPE--DIQADMQAAAVANENKTEGDAAEEDVDAGDLSNDDIDLVVQQTNATKGQAIKALKEHNGDIVNAIMSLS 164          
The following BLAST results are available for this feature:
BLAST of CX046735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_YEAS74.758e-2039.60Nascent polypeptide-associated complex subunit alp... [more]
NACA_DICDI4.758e-2037.14Nascent polypeptide-associated complex subunit alp... [more]
NACA_VANPO1.060e-1937.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_YARLI1.808e-1935.44Nascent polypeptide-associated complex subunit alp... [more]
NACA_CRYNE3.410e-1834.81Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANGA3.410e-1837.32Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_9H07_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9H07-P13-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046735 ID=CX046735; Name=CX046735; organism=Citrus sinensis; type=EST; length=856bp
TTTAGTCTTCTCTCTTTCGTGTCCGCTTCTCGTTCTCAAGTCTCAACACC
CAGCCCAAAAAAAATGACTGCTCAGTCTCAAGAAGAGCTCCTCGCTGCCC
ATCTTGAAGAGCAAAAGCTCAACCCCGATGAGCCTGTAGTCGAGGACGAC
GATGATGAGGATGATGATGAGGAGGATGAGGATGATGACAAGGATGAAGA
CGATGTGGAAGGGAAAGGAGATGGAAGTGGTCGCTCAAAACAGAGCAGGA
GTGAAAAGAAGAGTCGGAAAGCAATGTTGAAACTTGGAATGAAGCCAATC
CCTGGCGTCAGTCGAGTTACAGTTAAAAAGAGCAAAAATATTTTGTTTGT
TATCTCCAAACCAGATGTTTTCAAGAGTCCTACATCTGACACATACATTG
TCTTTGGGGAAGCAAAGATCGAGGATCTGAGTTCACAACTGCAAACTCAG
GCTGCAGAGCAGTTCAAGGTCCCTCCTCCTAACACAGGTAATGTGGCATC
AAAGCCTGAGTCATCGGCCATGGTTCAAGATGACGAAGAAGTAGATGAGA
CTGGTGTGGAGCCAAAGGACATTGAGTTGGTAATGACTCAAGCTGGGGTA
CCGAGGTCAAGGGCTGTGAAAGCACTCAAAGCCGCAGATGGTGACATCGT
TTCTGCCATTATGGAGCTAACAAATTGATGGTCACTTTCTTAATTATGTT
GCTCTGCTGAATGATCCCATAAGGAAATCTTTTTTTTTTTTTTTTCTCGC
TGTTACCATTTACAATTGAAGTTGCAGATTTTTGCTGGCTTTATAACTTT
TCTCTCTTTTTTTTCCCCTCTTTTTCCCTTGTGTATCAGCATGAAACAGC
TTTTAC
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