CX046729
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSI (Protein SCARECROW 1 OS=Oryza sativa subsp. indica GN=SCR1 PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.191e-27 Identity = 68/175 (38.86%), Postives = 105/175 (60.00%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVR---KLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAI 565 +I++LA+P G + QR+AAYF EA++ R++ S GL+ L + ++ V ++F + PF+K + NQAI EA E E+ VH+IDL+ + QW L L++RP GPP +R+TG+ E L+ RL++ A+ L +PF+F V K NLD +KL V EA+A+ Sbjct: 316 EIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPNPSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAV 490
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCR_MAIZE (Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.801e-26 Identity = 67/175 (38.29%), Postives = 105/175 (60.00%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVR---KLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAI 565 +I++LA+P G + QR+AAYF EA++ R++ S GL+ L ++ V ++F + PF+K + NQAI EA E E+ VH+IDL+ + QW L L++RP GPP +R+TG+ E L+ RL++ A+ L +PF+F +V K N+D +KL V EA+A+ Sbjct: 324 EIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPPGSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCAVAEKAGNVDPEKLGVTRREAVAV 498
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.013e-26 Identity = 82/255 (32.16%), Postives = 128/255 (50.20%), Query Frame = 2 Query: 53 ISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQK----EVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTG--EALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHH 796 I LA M+++A YF EALA+RI K +P + SS ++ + + F++ P+LK A NQAI+EA G VHVID + + QW AL+QAL+ RP GPP R+TGI P + + L Q+ +L + AE + + F+F V + L +LD L ++ EA+AI+SV +LH LL+ ++ LNS+ ++PK++ + EQ++NH+ Sbjct: 225 IGILAVSQSGAMRKVATYFAEALARRIYKIYP------QDSMESSYTDVLQMH--FYETCPYLKFAHFTANQAILEAFTGCNKVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVFELHRLLS------------------------------------RPGAIEKVLNSIKQINPKIVTLVEQEANHN 435
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.525e-25 Identity = 63/187 (33.69%), Postives = 103/187 (55.08%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEV------LDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSL 592 Q+ Q+ S G+ +QR+ AY E L R+ S ++KAL + + E + + ++ P+ K + N AI EA++ E VH+ID ++ QW++LI+AL RP GPP++RITGI + L+ + RL + AE +PF+F+ ++ +KL V+ GEALA++ L LH + Sbjct: 252 QLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRC-KDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHM 437
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: RGL3_ARATH (DELLA protein RGL3 OS=Arabidopsis thaliana GN=RGL3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.601e-25 Identity = 75/254 (29.53%), Postives = 126/254 (49.61%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGI--HPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVS-KLENLDFDKLRVKT-GEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHHG 799 ++ LA+ M ++A YF EALA+RI + P S S E +++ F+D P+LK A NQAI+EA+ +VVHVIDL + QW AL+QAL+ RP GPP R+TG+ +E + ++ +L + A+ + + F+FN + + +L +L+ D +T E L ++SV +LH +L+ ++ L ++ + P ++ V EQ++NH+G Sbjct: 182 RVGLLAASQAGAMGKVATYFAEALARRIYRIHP-------SAAAIDPSFEEILQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLS------------------------------------QPGSIEKLLATVKAVKPGLVTVVEQEANHNG 392
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.397e-25 Identity = 76/247 (30.77%), Postives = 121/247 (48.99%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSN 790 ++ + S G+ +QR+ AY E L R+ S ++K+L S S E + + ++ P+ K ++ N AI EAM+ E+ +H+ID + +QWIALIQA + RP G P++RITG+ VL + RL + A+K D+PF+FN+V ++ + L V+ GEAL ++ LH L D+ S+ D L + LSPKV+ + EQ+ N Sbjct: 75 ELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESY-EFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGV-GDGSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHL--PDESVSM------------------------------ENHRDRLLRMVKSLSPKVVTLVEQECN 287
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.437e-25 Identity = 78/257 (30.35%), Postives = 127/257 (49.42%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTG--EALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHHG 799 +I LA M+++A +F EALA+RI + P L+ + + +++ F++ P+LK A NQAI+EA EG+K VHVID + + QW ALIQAL+ RP GPP R+TGI P + L + +L + AE L + F++ V + L +LD L ++ E++ ++SV +LH LLA ++ L+ + + P+++ V EQ++NH+G Sbjct: 236 RIDYLAVSQAGAMRKVATFFAEALARRIYRLCP--ENPLDRSVLD------MLQMHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPALIQALALRPSGPPTFRLTGIGPPAPDNSDYLQDVGWKLVKFAETLHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHQLLA------------------------------------RPGAIEKVLSVVKQMKPEIVTVVEQEANHNG 448
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 76/257 (29.57%), Postives = 127/257 (49.42%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTG--EALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHHG 799 +I LA M+++A +F EALA+RI + P + S+S+ + + F++ P+LK A NQAI+EA EG+K VHVID + + QW AL+QAL+ RP GPP R+TGI P + L + +L + E +++ F++ V + L +LD L ++ E++ ++SV +LH LLA ++ ++ + + P++M V EQ++NH+G Sbjct: 243 RIGYLAVSQAGAMRKVATFFAEALARRIYRVCP------ENPLDHSMSDMLQLH--FYESSPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGIGPPAPDNSDYLQDVGWKLAKLVETINVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLA------------------------------------RPGAIEKVMSVVKQMKPEIMTVVEQEANHNG 455
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 73/257 (28.40%), Postives = 124/257 (48.25%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNSVVSK-LENLDFDKLRVK-TGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHHGL 802 ++ LA M ++A YF +ALA+RI + + + + S E ++ F++ P+LK A NQAI+EA+ + VHVIDL + QW AL+QAL+ RP GPP R+TGI P + L Q+ +L + A+ + + F+F + ++ L +L+ + + E L ++SV +LH LLA ++ LN++ + P ++ V EQ++NH+G+ Sbjct: 205 RVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVCAAV---NPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARS------------------------------------GSIEKLLNTVKAIKPSIVTVVEQEANHNGI 422
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 78/256 (30.47%), Postives = 128/256 (50.00%), Query Frame = 2 Query: 53 ISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQK----EVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTG--EALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHHG 799 I LAS M+++A YF EALA+RI + +P + S ++++ + F++ P+LK A NQAI+EA VHVID + QW AL+QAL+ RP GPP R+TGI P + + L Q+ +L + AE++ I F+F V + L +L+ + L ++ E +A+++V +LH LLA ++ ++S+ + PK++ V EQ++NH+G Sbjct: 197 IGLLASSQTGAMRKVATYFAEALARRIYRIFPP------DSLDPSYNDKLQIP--FYETCPYLKFAHFTANQAILEAFSMASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAERIGIEFEFRGFVANSLADLEPEMLDIRPPEIEVVAVNAVFELHPLLA------------------------------------RPGGIEKVVSSIKAMKPKIVTVVEQEANHNG 408 The following BLAST results are available for this feature:
BLAST of CX046729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046729 ID=CX046729; Name=CX046729; organism=Citrus sinensis; type=EST; length=802bpback to top |