CX046729
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 77/260 (29.62%), Postives = 126/260 (48.46%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNSVV-SKLENLDFDKLRVK------TGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHH 796 QI LAS G M+++AAYF EALA+R+ + P +L + L+ F++ P+LK A NQAI+EA G + VHV+D + QW AL+QAL+ RP GPP R+TG+ P + + L Q+ +L + A + + FQ+ +V + L +L+ L+ + E +A++SV +LH LLA ++ L ++ + P+++ V EQ++NH+ Sbjct: 268 QIPMLASSQGGAMRKVAAYFGEALARRVYRFRPPPDSSLLDAAFAD-----LLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGDDTDDEPEVIAVNSVFELHRLLA------------------------------------QPGALEKVLGTVRAVRPRIVTVVEQEANHN 486
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.202e-24 Identity = 74/190 (38.95%), Postives = 110/190 (57.89%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRIS-SVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFD--KLRVKTGEALAISSVLQLHSLL 595 QI LA M+++A YF EALA+RI + P T+I S+S+ + + F++ P+LK A NQAI+EA EG+K VHVID + + QW AL+QAL+ R GPP R+TGI P + L ++ +L + AE + + F++ V + L +LD +LR EA+A++SV +LH LL Sbjct: 233 QIGFLAVSQAGAMRKVATYFAEALARRIYRLSPP------QTQIDHSLSDTLQMH--FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPSFRLTGIGPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSETEAVAVNSVFELHKLL 414
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.756e-24 Identity = 73/190 (38.42%), Postives = 110/190 (57.89%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRIS-SVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTG--EALAISSVLQLHSLL 595 QI LA M+++A YF EALA+RI + P T+I S+S+ + + F++ P+LK A NQAI+EA EG+K VHVID + + QW AL+QAL+ R GPP R+TGI P + L ++ +L + AE + + F++ V + L +LD L ++ EA+A++SV +LH LL Sbjct: 239 QIGFLAVSQAGAMRKVATYFAEALARRIYRLSPP------QTQIDHSLSDTLQMH--FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPVFRLTGIGPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSEIEAVAVNSVFELHKLL 420
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.756e-24 Identity = 80/256 (31.25%), Postives = 125/256 (48.83%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQK----EVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTG--EALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHH 796 QI LA M+++A YF EALA+RI + P S S+S+ + + F++ P+LK A NQAI+EA +G+K VHVID + ++ QW AL+QAL+ RP GPP R+TGI P + L ++ +L AE + + F++ V + L +LD L ++ E++A++SV +LH LL +D L + + P++ V EQ+SNH+ Sbjct: 194 QIGFLAVSQIGAMRKVATYFAEALARRIYRLSPS-----QSPIDHSLSDTLQMH--FYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLG------------------------------------RPGAIDKVLGVVNQIKPEIFTVVEQESNHN 406
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.756e-24 Identity = 75/253 (29.64%), Postives = 122/253 (48.22%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEV------LDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSN 790 ++ ++ S G+ ++R+ AY E L R+ S ++KAL S S+ + ++ P+ K ++ N AI EA++GE +H+ID + ++ AQWI+L+QAL+ RP GPP +RITGI L+ + RL+ A +PF+F+ + ++ L V GEALA++ L+LH + D+ S AN D L + LSPKV+ + E +SN Sbjct: 199 ELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIYKALKCKEPKS-SDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPTVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIPGEALAVNFTLELHHI--PDESVS--------TAN----------------------HRDRLLRMVKSLSPKVLTLVEMESN 418
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.905e-24 Identity = 77/261 (29.50%), Postives = 128/261 (49.04%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNSVV-SKLENLDFDKLRV-------KTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHH 796 QI LA+ G M+++AAYF EALA+R+ + P +ST + + ++L F++ P+LK A NQAI+EA G VHV+D + QW AL+QAL+ RP GPP R+TG+ P + + L Q+ +L + A + + FQ+ +V + L +L+ L+ + E +A++SV +LH LLA ++ L ++ + P+++ V EQ++NH+ Sbjct: 266 QIPTLAASQGGAMRKVAAYFGEALARRVYRFRPA-----DSTLLDAAFADLL-HAHFYESCPYLKFAHFTANQAILEAFAGCHRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEADANEEPEVIAVNSVFELHRLLA------------------------------------QPGALEKVLGTVHAVRPRIVTVVEQEANHN 484
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SCL28_ARATH (Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.905e-24 Identity = 69/202 (34.16%), Postives = 107/202 (52.97%), Query Frame = 2 Query: 62 LASPDGDT-MQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFF--DMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLL------AADDYASLIALKNSL 640 LASP G T M R+ AY+ EALA R+ + WP + E+ L F + P K N+ ++ A EG++ VH+ID + + QW + Q+L++R P H+RITGI K L++ RL AE +++ F+F+ VV +LE++ L VK GE++A++ V+Q+H L A D+ LI N + Sbjct: 303 LASPRGRTPMTRLIAYYIEALALRVARMWPHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPI 504
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.093e-23 Identity = 75/261 (28.74%), Postives = 126/261 (48.28%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNSVV-SKLENLDFDKLRV-------KTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHH 796 QI LA+ G M+++AAYF EALA+R+ + P +L + L+ F++ P+LK A NQAI+EA G + VHV+D + QW AL+QAL+ RP GPP R+TG+ P + + L Q+ +L + A + + FQ+ +V + L +L+ L+ + E +A++SV ++H LLA ++ L ++ + P+++ V EQ++NH+ Sbjct: 255 QIPLLAASQGGAMRKVAAYFGEALARRVFRFRPQPDSSLLDAAFAD-----LLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEEDPNEEPEVIAVNSVFEMHRLLA------------------------------------QPGALEKVLGTVRAVRPRIVTVVEQEANHN 474
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: RHT1_WHEAT (DELLA protein RHT-1 OS=Triticum aestivum GN=RHT1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.093e-23 Identity = 75/261 (28.74%), Postives = 126/261 (48.28%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNSVV-SKLENLDFDKLRV-------KTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKVMVVTEQDSNHH 796 QI LA+ G M+++AAYF EALA+R+ + P +L + L+ F++ P+LK A NQAI+EA G + VHV+D + QW AL+QAL+ RP GPP R+TG+ P + + L Q+ +L + A + + FQ+ +V + L +L+ L+ + E +A++SV ++H LLA ++ L ++ + P+++ V EQ++NH+ Sbjct: 259 QIPLLAASQGGAMRKVAAYFGEALARRVFRFRPQPDSSLLDAAFAD-----LLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEEDPNEEPEVIAVNSVFEMHRLLA------------------------------------QPGALEKVLGTVRAVRPRIVTVVEQEANHN 478
BLAST of CX046729 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.093e-23 Identity = 72/189 (38.10%), Postives = 106/189 (56.08%), Query Frame = 2 Query: 50 QISQLASPDGDTMQRIAAYFTEALAQRILKSWPGLHKALNSTRISSVSEEMLVRKLFFDMFPFLKVAFVLTNQAIIEAMEGEKVVHVIDLNAAEPAQWIALIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFD--KLRVKTGEALAISSVLQLHSLL 595 QI LA M+++A YF EALA+RI + P +I + L + F++ P+LK A NQAI+EA EG+K VHVID + + QW AL+QAL+ R GPP R+TGI P + L ++ +L + AE + + F++ V + L +LD +LR EA+A++SV +LH LL Sbjct: 246 QIGCLAVSQAGAMRKVATYFAEALARRIYRLSPP------QNQIDHCLSDTL-QMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLL 427 The following BLAST results are available for this feature:
BLAST of CX046729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046729 ID=CX046729; Name=CX046729; organism=Citrus sinensis; type=EST; length=802bpback to top |