DN134763

Overview
NameDN134763
Unique NameDN134763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8093 contig Csv1_Contig8093:961..1628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: SDCS_STAAR (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MRSA252) GN=sdcS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 69/192 (35.94%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQ 598
            M + E  V  +F +   LW+TR     +  W         DGT ++ ++ LLFIIP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE  SN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I I+
Sbjct:  293 MKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: SDCS_STAAN (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain N315) GN=sdcS PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 69/192 (35.94%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQ 598
            M + E  V  +F +   LW+TR     +  W         DGT ++ ++ LLFIIP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE  SN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I I+
Sbjct:  293 MKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: SDCS_STAAM (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdcS PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 69/192 (35.94%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQ 598
            M + E  V  +F +   LW+TR     +  W         DGT ++ ++ LLFIIP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE  SN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I I+
Sbjct:  293 MKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: SDCS_STAAC (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain COL) GN=sdcS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 69/192 (35.94%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQ 598
            M + E  V  +F +   LW+TR     +  W         DGT ++ ++ LLFIIP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE  SN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I I+
Sbjct:  293 MKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: SDCS_STAA8 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain NCTC 8325) GN=sdcS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 69/192 (35.94%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQ 598
            M + E  V  +F +   LW+TR     +  W         DGT ++ ++ LLFIIP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE  SN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I I+
Sbjct:  293 MKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: SDCS_STAA3 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain USA300) GN=sdcS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 69/192 (35.94%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQ 598
            M + E  V  +F +   LW+TR     +  W         DGT ++ ++ LLFIIP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE  SN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I I+
Sbjct:  293 MKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: S13A2_HUMAN (Solute carrier family 13 member 2 OS=Homo sapiens GN=SLC13A2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 80/212 (37.74%), Postives = 118/212 (55.66%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRA------GDGTASVVMATLLFIIPS----MKQKGEK---------LMDWNKC-KKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQD 601
            M FAE  +  +F +L+ LW TR       GWG L    A       DGT ++ +  ++FIIPS    + Q  E          L+DW    +K+PWNI+LLLG G+A+A G   SGL++ L   L  L++ P  AIA I+ L+ A  TE  SN ATTT+ LP+L  +A+ + +HPL +M+P  +    +F+LP  TP N + F+ G +++ D
Sbjct:  325 MTFAEKAISILFVILVLLWFTRE-PGFFLGWGNLAFPNAKGESMVSDGTVAIFIGIIMFIIPSKFPGLTQDPENPGKLKAPLGLLDWKTVNQKMPWNIVLLLGGGYALAKGSERSGLSEWLGNKLTPLQSVPAPAIAIILSLLVATFTECTSNVATTTIFLPILASMAQAICLHPLYVMLPCTLATSLAFMLPVATPPNAIVFSFGDLKVLD 535          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: NAD1_CAEEL (Sodium-dependent low-affinity dicarboxylate transporter 1 OS=Caenorhabditis elegans GN=nac-1 PE=2 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 66/207 (31.88%), Postives = 118/207 (57.00%), Query Frame = 2
Query:   17 VRSMAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMATLLFIIPS----------MKQKGEKLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQD 601
            + + +FAE  V+  F +L+ LW+ R     +PGWG +F D    D T+++ +  LLF +P            ++    L+DW   + + PW+++ LLG GFA+A GV+ SGL+ D+   + +L+   +  I  I  +IS  +T   SN    ++ +P++ ++A+++ + PL  M+P  I A F+FLLP  TP N + F++G++++ D
Sbjct:  314 LHAFSFAEMAVIFCFALLLVLWILRE-PQVVPGWGEMFKDEFVSDATSAMFIVILLFTLPEKLPSSRGSSEQRKASSGLLDWATVQDRFPWSVLFLLGGGFALAAGVKESGLSHDIGAIMRYLDVFNHNIIMLICIIISVTLTNVCSNTVIASIFIPIVAELARSLEIDPLNFMLPVTISASFAFLLPVATPPNAIVFSSGYLKVFD 519          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: SDCS_STAAW (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MW2) GN=sdcS PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.138e-30
Identity = 68/192 (35.42%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQ 598
            M + E  V  +F +   LW+TR     +  W         DGT ++ ++ LLF+IP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE  SN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I I+
Sbjct:  293 MKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: SDCS_STAAS (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MSSA476) GN=sdcS PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.138e-30
Identity = 68/192 (35.42%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQ 598
            M + E  V  +F +   LW+TR     +  W         DGT ++ ++ LLF+IP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE  SN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I I+
Sbjct:  293 MKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
The following BLAST results are available for this feature:
BLAST of DN134763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
SDCS_STAAR8.717e-3135.94Sodium-dependent dicarboxylate transporter sdcS OS... [more]
SDCS_STAAN8.717e-3135.94Sodium-dependent dicarboxylate transporter sdcS OS... [more]
SDCS_STAAM8.717e-3135.94Sodium-dependent dicarboxylate transporter sdcS OS... [more]
SDCS_STAAC8.717e-3135.94Sodium-dependent dicarboxylate transporter sdcS OS... [more]
SDCS_STAA88.717e-3135.94Sodium-dependent dicarboxylate transporter sdcS OS... [more]
SDCS_STAA38.717e-3135.94Sodium-dependent dicarboxylate transporter sdcS OS... [more]
S13A2_HUMAN8.717e-3137.74Solute carrier family 13 member 2 OS=Homo sapiens ... [more]
NAD1_CAEEL8.717e-3131.88Sodium-dependent low-affinity dicarboxylate transp... [more]
SDCS_STAAW1.138e-3035.42Sodium-dependent dicarboxylate transporter sdcS OS... [more]
SDCS_STAAS1.138e-3035.42Sodium-dependent dicarboxylate transporter sdcS OS... [more]

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Properties
Property NameValue
Genbank descriptionwca01a02 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01a02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134763 ID=DN134763; Name=DN134763; organism=Citrus sinensis; type=EST; length=667bp
AGAGAGAGCTTGACATGTTAGGTCCATGGCTTTTGCTGAAANNNTGGTAC
TAGCTGTATTTGGGATGCTAATAGCATTGTGGATGACAAGATCAATAACA
GATGACATTCCAGGTTGGGGAGCACTCTTCAATGACCGTGCTGGTGATGG
AACTGCTAGTGTTGTGATGGCAACATTGTTGTTCATAATTCCAAGCATGA
AGCAAAAGGGAGAAAAATTGATGGATTGGAACAAATGCAAAAAGCTACCT
TGGAACATTATATTGCTTTTAGGGGCTGGCTTTGCTATAGCTGATGGAGT
CAGGACTAGCGGTCTTGCTGATGATCTGTCAAAAGCATTGGATTTCCTGG
AGGCGGCGCCATATTTAGCCATTGCACCTATCGTATGTCTGATTAGCGCG
ATTATTACTGAATTCATATCAAATAATGCCACAACAACTCTCGTTCTTCC
ACTTCTGATCCAAATAGCAAAAACTATGCATGTTCATCCATTGCTTCTTA
TGGTTCCTGGAGCAATTGGAGCACAATTTTCTTTCTTGTTGCCGACTGGA
ACCCCTTCAAATATCGTTGGATTCACAACCGGGCACATCGAAATTCAAGA
TANNNNNNNGANNGGGCTGCCCCTTCCNNNNGNTGGCATTGCTGCTCTGG
CCTTTCTAATGCCTACA
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