DN134763

Overview
NameDN134763
Unique NameDN134763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8093 contig Csv1_Contig8093:961..1628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: SDCS_STAAB (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sdcS PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.138e-30
Identity = 68/192 (35.42%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQ 598
            M + E  V  +F +   LW+TR     +  W         DGT ++ ++ LLF+IP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE  SN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I I+
Sbjct:  293 MKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: S13A4_HUMAN (Solute carrier family 13 member 4 OS=Homo sapiens GN=SLC13A4 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.259e-29
Identity = 66/199 (33.17%), Postives = 113/199 (56.78%), Query Frame = 2
Query:   59 FGMLIALWMTRSITDDIPGWGALFNDRA--GDGTASVVMATLLFIIPSMKQ---------------KGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQD 601
            F ++  LW TR     +PGW + F  +    D T SV +  LLF+IP+ K                  E ++ W   +K +PW I++L+G G+A+A G ++SGL+  +   +  L + P  A+  + C++ +I+TEF+SN AT T+ LP+L  +++T+H++PL  ++P  +   F+ +LP G P N + F+ GH +I+D
Sbjct:  383 FILMTVLWFTRE-PGFVPGWDSFFEKKGYRTDATVSVFLGFLLFLIPAKKPCFGKKNDGENQEHSLGTEPIITWKDFQKTMPWEIVILVGGGYALASGSKSSGLSTWIGNQMLSLSSLPPWAVTLLACILVSIVTEFVSNPATITIFLPILCSLSETLHINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIKD 580          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: S13A5_MOUSE (Solute carrier family 13 member 5 OS=Mus musculus GN=Slc13a5 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29
Identity = 76/215 (35.35%), Postives = 115/215 (53.49%), Query Frame = 2
Query:   23 SMAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALF-----NDRAGDGTASVVMATLLFIIPSMKQKGE----------------KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQD 601
            S+++ E  VL  F +L+ LW +R     +PGW +            D T ++ +A LLFIIPS K K                   L+DW   + K+PW+I+LLLG GFA+A G  TSGL+  ++  ++ L       I  I+  + A+ TE  SN ATTTL LP+   +A+++ +HPL +M+P  + A  +F+LP  TP N + F  GH+ + D
Sbjct:  315 SLSYPECNVLFCFTLLVILWFSRD-PGFMPGWLSFAWVEGNTVHITDATVAIFVAILLFIIPSQKPKFNFSSQTEEERKTPFYPPALLDWKVAQEKVPWDIVLLLGGGFAMAKGCETSGLSKWMAAQMEPLRLVKPAVITLILSCLVAMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTMSASLAFMLPVATPPNAIVFAYGHLRVVD 528          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: NAD3_CAEEL (Sodium-dependent high-affinity dicarboxylate transporter 3 OS=Caenorhabditis elegans GN=nac-3 PE=2 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29
Identity = 70/207 (33.82%), Postives = 120/207 (57.97%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRA-GDGTASVVMATLLFIIPS-------------MKQKGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQD 601
            M +AE  V   F +L++LW+ R+    +PG+G  F   A  D T+++++A LLF++PS             +K++G  LMDW   ++  PW+++LLLG GFA+A GV+ SGL+  +  +L  +E  P   +  +  LI+ +IT   SN  T ++ +P++  +A+    HP  LM+P  + + F+F+ P GTP N + F +G +++ D
Sbjct:  316 MTYAEKSVFVCFCILLSLWVFRN-PGVVPGFGVFFKKGAYTDATSAMIVAFLLFVLPSERPDLATYIKKEDLKKRG-CLMDWKTMQETFPWSVVLLLGGGFALAAGVKESGLSLLIGNSLSSIEHLPLWILQLLTMLIAMVITNICSNTVTASIFVPIVATLAQRAGHHPFTLMLPTTLASSFAFIFPVGTPPNAIVFGSGMVKVSD 520          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: YKG6_CAEEL (Uncharacterized transporter B0285.6 OS=Caenorhabditis elegans GN=B0285.6 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.818e-28
Identity = 78/231 (33.77%), Postives = 122/231 (52.81%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMATLLFIIPSMKQ--------------KGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDF-LEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDXXXXXXXXXXXXIAALAFLMPT 667
            M +AE   L +F + +  W++ S    IPGW  LF      D  + +V   LLFI P  K               + E L+DW+  ++  PW+IILLLGAGFAI+D VR SGL+  ++ +L+  +   P+  +  I+ ++  ++TEF +N+AT ++ +P+  ++A+ +  HPL   +P AIG  FSF+LP  TP+N + + T  I + D            IA  A  M T
Sbjct:  318 MTWAEKSTLVIFVLAVLSWVS-SDPKVIPGWSDLFRKGYVTDSCSGLVAVFLLFIWPKKKPDFRIFRKDKSRPSVRQEPLIDWDCVRRRFPWSIILLLGAGFAISDAVRVSGLSSLIACSLNSTISKMPFFVMQIILSIVVVVMTEFSTNSATASIFIPISFKMAEAVGAHPLYFSIPTAIGPSFSFMLPMATPANAIVYETKTIRMIDMVSCGVFLNIFCIAITAINMNT 547          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: S13A1_HUMAN (Solute carrier family 13 member 1 OS=Homo sapiens GN=SLC13A1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.178e-27
Identity = 71/206 (34.47%), Postives = 113/206 (54.85%), Query Frame = 2
Query:   32 FAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMATLLFIIPSMK-----QKGE-------KLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQD 601
            + E   L +F ++  LW +R     +PGW ALF++  G   D T ++++  L F+IP+         GE        L+ W + +  +PW+I +L+G GFA+ADG   SGL+  +   L  L + P   I  I  L+   +TE  SN AT TL LP+L  +A+ +HV+PL +++P  +   F+FLLP   P N + F+ GH+++ D
Sbjct:  345 YQEIVTLVLFIIMALLWFSRD-PGFVPGWSALFSEYPGFATDSTVALLIGLLFFLIPAKTLTKTTPTGEIVAFDYSPLITWKEFQSFMPWDIAILVGGGFALADGCEESGLSKWIGNKLSPLGSLPAWLIILISSLMVTSLTEVASNPATITLFLPILSPLAEAIHVNPLYILIPSTLCTSFAFLLPVANPPNAIVFSYGHLKVID 549          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: S13A1_RAT (Solute carrier family 13 member 1 OS=Rattus norvegicus GN=Slc13a1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.010e-27
Identity = 70/208 (33.65%), Postives = 113/208 (54.33%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMATLLFIIPSMK-----QKGE-------KLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQD 601
            M + E   L +F ++  LW +R     + GW  LF++  G   D T ++V   L F+IP+ K       G+        L+ W + +  +PW+I +L+G GFA+ADG + SGL+  +   L  L + P   I  I  LI   +TE  SN AT T++ P+L  +A+ +HV+PL +++P  +   F+FLLP   P N + F+ GH+++ D
Sbjct:  343 MRYQEIVTLVIFIVMALLWFSRD-PGFVTGWSVLFSEYPGYVTDSTVALVAGILFFLIPAKKLTKMTSTGDIIAFDYSPLITWKEFQSFMPWDIAILVGGGFALADGCQVSGLSSWIGSKLSPLGSLPVWLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIHVNPLHILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVID 549          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: S13A1_MOUSE (Solute carrier family 13 member 1 OS=Mus musculus GN=Slc13a1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.477e-27
Identity = 70/208 (33.65%), Postives = 113/208 (54.33%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMATLLFIIPSMK-----QKGE-------KLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQD 601
            M + E   L +F ++  LW +R     + GW  LF++  G   D T ++V   L F+IP+ K       GE        L+ W + +  +PW+I +L+G GFA+ADG + SGL++ +   L  L + P   I  I  LI   +TE  SN AT T++ P+L  +A+ + V+PL +++P  +   F+FLLP   P N + F+ GH+++ D
Sbjct:  342 MRYQEIVTLVIFIVMALLWFSRD-PGFVTGWSVLFSEYPGYVTDSTVALVAGILFFLIPAKKVTKMTSAGEIIAFDYTPLITWKEFQSFMPWDIAILVGGGFALADGCQVSGLSNWIGSKLSPLGSLPVRLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIQVNPLQILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVID 548          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: NAD2_CAEEL (Sodium-dependent high-affinity dicarboxylate transporter 2 OS=Caenorhabditis elegans GN=nac-2 PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 63/193 (32.64%), Postives = 102/193 (52.85%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDR--AGDGTASVVMATLLFIIPSMK----QKGEKLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKAL-DFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTT 580
            +++ E  V   F +LI  W++R      PGWG L   R    D  + V+++ +LF+ P            ++ W   K K  W+  LL+GAG+AI++GV  SGL+  +S  + +       L +   V  I  I+TEF SN +T ++ +P+ + +A++M VHPL L +P  +   F+F+LP  TP N V + T
Sbjct:  304 VSWGEKSVFVFFILLIGSWISRD-PGFTPGWGDLLPHRNFISDSVSGVLISCILFVWPKDPFDPIDPMAPILKWTDMKSKFSWSCTLLIGAGYAISEGVDKSGLSRLISCGMKNIFVGMSSLPLQLTVTTIIVIMTEFASNVSTGSIFIPISLGVAESMGVHPLYLALPTTVACSFAFMLPISTPPNAVVYDT 495          
BLAST of DN134763 vs. ExPASy Swiss-Prot
Match: INDY2_DROME (Protein I'm not dead yet 2 OS=Drosophila melanogaster GN=Indy-2 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19
Identity = 55/205 (26.83%), Postives = 97/205 (47.32%), Query Frame = 2
Query:   26 MAFAEXXVLAVFGMLIALWMTRSITDDIPGWGALFNDRA-GDGTASVVMATLLFIIPSM--------------KQKGEKLMDWNKC-KKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFISNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIE 592
            M+  E  +   F  +I L +TR     +PGW  L N +  G  +    +  L+F +P+                Q  + ++ W    + +PW ++ LLG GFA+A   R +GL   +SKA+  L   P + +  I  +++   + F +N     +VLP+L +++  + +HPL+L +P  +G    + LP  TP N +     HI+
Sbjct:  309 MSCHEIQMAIAFAFMIVLLITRK-PGFVPGWSDLINRKVVGSASGLSFIVLLIFALPTQYTFFKYCCGKGPFTAQAIDAILSWEYVLRNIPWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPNIVVQSITFVLANFFSAFNANVVVANIVLPILCEMSLALELHPLILTLPACLGISMVYFLPVSTPPNAIVTQYAHIK 512          
The following BLAST results are available for this feature:
BLAST of DN134763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
SDCS_STAAB1.138e-3035.42Sodium-dependent dicarboxylate transporter sdcS OS... [more]
S13A4_HUMAN1.259e-2933.17Solute carrier family 13 member 4 OS=Homo sapiens ... [more]
S13A5_MOUSE1.644e-2935.35Solute carrier family 13 member 5 OS=Mus musculus ... [more]
NAD3_CAEEL1.644e-2933.82Sodium-dependent high-affinity dicarboxylate trans... [more]
YKG6_CAEEL1.818e-2833.77Uncharacterized transporter B0285.6 OS=Caenorhabdi... [more]
S13A1_HUMAN1.178e-2734.47Solute carrier family 13 member 1 OS=Homo sapiens ... [more]
S13A1_RAT2.010e-2733.65Solute carrier family 13 member 1 OS=Rattus norveg... [more]
S13A1_MOUSE4.477e-2733.65Solute carrier family 13 member 1 OS=Mus musculus ... [more]
NAD2_CAEEL6.262e-2132.64Sodium-dependent high-affinity dicarboxylate trans... [more]
INDY2_DROME4.487e-1926.83Protein I'm not dead yet 2 OS=Drosophila melanogas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionwca01a02 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01a02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134763 ID=DN134763; Name=DN134763; organism=Citrus sinensis; type=EST; length=667bp
AGAGAGAGCTTGACATGTTAGGTCCATGGCTTTTGCTGAAANNNTGGTAC
TAGCTGTATTTGGGATGCTAATAGCATTGTGGATGACAAGATCAATAACA
GATGACATTCCAGGTTGGGGAGCACTCTTCAATGACCGTGCTGGTGATGG
AACTGCTAGTGTTGTGATGGCAACATTGTTGTTCATAATTCCAAGCATGA
AGCAAAAGGGAGAAAAATTGATGGATTGGAACAAATGCAAAAAGCTACCT
TGGAACATTATATTGCTTTTAGGGGCTGGCTTTGCTATAGCTGATGGAGT
CAGGACTAGCGGTCTTGCTGATGATCTGTCAAAAGCATTGGATTTCCTGG
AGGCGGCGCCATATTTAGCCATTGCACCTATCGTATGTCTGATTAGCGCG
ATTATTACTGAATTCATATCAAATAATGCCACAACAACTCTCGTTCTTCC
ACTTCTGATCCAAATAGCAAAAACTATGCATGTTCATCCATTGCTTCTTA
TGGTTCCTGGAGCAATTGGAGCACAATTTTCTTTCTTGTTGCCGACTGGA
ACCCCTTCAAATATCGTTGGATTCACAACCGGGCACATCGAAATTCAAGA
TANNNNNNNGANNGGGCTGCCCCTTCCNNNNGNTGGCATTGCTGCTCTGG
CCTTTCTAATGCCTACA
back to top