DC900404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 5.474e-44 Identity = 95/187 (50.80%), Postives = 124/187 (66.31%), Query Frame = 3 Query: 6 SDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMG--FKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRS-MAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSS 551 S PPS+ SF R ++ IL F GSP IN YPFFAY+ +P+ +L F LFQPN G D G+ Y NM AQVDAV+ AL+A+G +K V IVV+ETGWP GDP EVG + +NA+ YNGNLI + S TP+ P + ++FAL++E++KPGPTSER++GLF PD + Y +GI SS Sbjct: 166 SYPPSATSFRRDLLGSLTPILDFHVKTGSPILINAYPFFAYEENPKHVSLDFVLFQPNQGFTDPGSNFHYDNMLFAQVDAVYHALDAVGISYKKVPIVVSETGWPSNGDPQEVGATCDNARKYNGNLIKMMMSKKMRTPIRPECDLTIFVFALFNENMKPGPTSERNYGLFNPDGTPVYSLGIKTSS 352
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.144e-33 Identity = 81/185 (43.78%), Postives = 115/185 (62.16%), Query Frame = 3 Query: 6 SDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSAL-NAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSS 551 S PPS G+F T+ I+ L G+P +N YP+FAY +DP L + L +A + G++Y NMFDA +DAV++A+ A G + +E+VV+ETGWP G G SVENA AY NL+ H + GTP PGK+V+TYIFA+++E+ KP E++FG+F+PD+S Y V + SS Sbjct: 142 SYPPSQGTFSEAALPTVGPIVSHLASSGTPLLVNVYPYFAYSADPSSVRLDYALLSSSAAVAVTDNGVEYANMFDAILDAVYAAVEKAGGGESLELVVSETGWPSGG--GGYGASVENAAAYINNLVRH---VGGTPRRPGKAVETYIFAMFNENQKPEGV-EQNFGMFQPDMSQVYHVDFTASS 320
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 7.415e-33 Identity = 78/175 (44.57%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 6 SDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPET-LAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAY 527 S PPSSG F + I +FL G+PF N YP+FAY+ D L + QP D+G G+ Y ++FDA VD++++AL G +V +VV+E+GWP G G SVENA+ YN LI H+RS GTP PG +++TYIFA+++E+ KPG ER+FGLF P+ Y Sbjct: 142 SFPPSSGVFRDPSGLVPIARFLDSTGAPFLANVYPYFAYRDDRGQNIRLNYATLQPGTTVRDNGNGLTYTSLFDAMVDSIYAALEKAGTPNVRVVVSESGWPSAGG---FGASVENARNYNQGLIDHIRS--GTPKRPG-AIETYIFAMFNENRKPGDEVERNFGLFFPNKQPVY 310
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 2.157e-32 Identity = 77/181 (42.54%), Postives = 110/181 (60.77%), Query Frame = 3 Query: 6 SDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGIS 542 + PPS G F + + ++ FL SP +N YP+F+Y D L + LF + VD+ G Y N+FDA +D+V++AL G +EIVV+ETGWP G VG SVENAK Y NLI H+++ G+P PGK+++TYIFA++DE+ K PT E+ +GLF PD + Y+V + Sbjct: 166 TSPPSQGRFRDEYKSFLEPVIGFLASKQSPLLVNLYPYFSYMGDTANIHLDYALFTAQS-TVDNDPGYSYQNLFDANLDSVYAALEKSGGGSLEIVVSETGWPTEG---AVGTSVENAKTYVNNLIQHVKN--GSPRRPGKAIETYIFAMFDEN-KKEPTYEKFWGLFHPDRQSKYEVNFN 339
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 7.149e-31 Identity = 68/188 (36.17%), Postives = 98/188 (52.13%), Query Frame = 3 Query: 6 SDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPR-PETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLK---PGPTSERSFGLFKPDLSAAYDVGISKSS 551 S+ PS G F + D M I++FL D+G+PFTIN YPF + +DP P AF G + G Y N+ DA D + +L GF ++ I+V E GWP GD N ++ A+ YN + ++ GTP+ PG ++D Y+F L DED K PG ER +G+F D Y + + + Sbjct: 171 SNLPSDGDFRPEIRDLMLNIVKFLSDNGAPFTINIYPFISLYNDPNFPVEFAFF---DGTGTPINDNGRIYDNVLDANYDTLVWSLQKNGFGNLTIIVGEVGWPTDGDKN---ANLMYARRYNQGFMNRQKANKGTPMRPG-AMDAYLFGLIDEDAKSIQPG-NFERHWGIFYIDGQPKYQLSLGSGN 350 HSP 2 Score: 53.1434 bits (126), Expect = 7.149e-31 Identity = 28/89 (31.46%), Postives = 46/89 (51.69%), Query Frame = 2 Query: 623 AAGWCV--PKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVY 883 A WC+ P A + D QL S+ YAC DC+ + G +C N + + ++A N YYQ S + C F + +++++PS C + Sbjct: 362 AKKWCILAPNANLQDPQLGPSVSYACDHA-DCTSLGYGSSCGNLN-LAQNVSYAFNSYYQVSNQLDSACKFPGLSIVSTRDPSVGSCKF 448
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.150e-31 Identity = 70/185 (37.84%), Postives = 102/185 (55.14%), Query Frame = 3 Query: 15 PSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPR-PETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLK---PGPTSERSFGLFKPDLSAAYDVGISKSS 551 PS G F +D M I++FL ++G PFT+N YP+ + ++P P AF F NA ++ G G Y NMFDA D + AL GF ++ I++ E GWP GD N +++ AK +N +AH+ GTP PG +D Y+F+L DED K PG ER +G+F D Y + + ++ Sbjct: 169 PSGGDFRANIRDLMITIVKFLSENGGPFTVNIYPYISLYTNPDFPVDYAF--FDGNAQPLNDG-GTFYYNMFDANYDTLVHALEKNGFGNMPIIIGEIGWPTDGDSN---ANLDYAKKFNQGFMAHISGGKGTPRRPG-PIDAYLFSLIDEDAKSVQPG-YFERHWGIFTFDGLPKYALNLGTTN 345 HSP 2 Score: 48.521 bits (114), Expect = 7.150e-31 Identity = 27/87 (31.03%), Postives = 43/87 (49.43%), Query Frame = 2 Query: 632 WCV--PKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYP 886 WCV P + D Q+ ++ YACS G DC+ + G +C + + ++A N YYQ + C F + +T +PS C +P Sbjct: 362 WCVMKPNVRLDDPQVAPAVSYACSLG-DCTSLGVGTSCANLDGK-QNISYAFNSYYQIQDQLDTACKFPNISEVTKTDPSTGTCRFP 446
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.184e-30 Identity = 76/216 (35.19%), Postives = 121/216 (56.02%), Query Frame = 3 Query: 6 SDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSM--AGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQTPSAPVTPSTPKNSKRLHHQNQQQLVGV 638 S PPS+G+F + T M +L+FL S F +N +P+F + +P +L F LFQ ++ D TG+ Y N+ D +D+V A+ +G+ + + ++ETGWP GD +E G ++ NA YN NLI + + GTP PG + T++F+L++E+ K G ++R +G+ PD S YDV + QTP P PK + + ++ Q V V Sbjct: 181 SFPPSNGTFREEITGPVMLPLLKFLNGTNSYFFLNVHPYFRWSRNPMNTSLDFALFQGHSTYTDPQTGLVYRNLLDQMLDSVLFAMTKLGYPHMRLAISETGWPNFGDIDETGANILNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDVDF--TGQTPLTGFNP-LPKPTNNVPYKGQVWCVPV 393 HSP 2 Score: 70.0922 bits (170), Expect = 2.752e-11 Identity = 35/102 (34.31%), Postives = 54/102 (52.94%), Query Frame = 2 Query: 605 PSPKPT------AAGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPS 889 P PKPT WCVP G ++ +L+ +L AC+Q C+ + PG C+EP ++ HA++A+N Y+ C F+ A T+ NP + C +PS Sbjct: 374 PLPKPTNNVPYKGQVWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNPGNDRCKFPS 475
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: E13B_HORVU (Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.444e-30 Identity = 73/176 (41.48%), Postives = 105/176 (59.66%), Query Frame = 3 Query: 6 SDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDV 533 S PPS+G F + M + + L G+P N YP+FAY+ +P +L + FQP D G+ Y ++FDA VDAV++AL G V++VV+E+GWP G S NA+ YN LI H+ GTP ++++TYIFA+++E+ K G +ERSFGLF PD S AY++ Sbjct: 164 SFPPSAGVF-KNAYMTDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGG---FAASAGNARTYNQGLINHVG--GGTP-KKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNI 332
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.309e-29 Identity = 76/186 (40.86%), Postives = 105/186 (56.45%), Query Frame = 3 Query: 6 SDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRV-DSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQTP 560 S PPSS F Q M I + L +P N YP+FAY +PR L + FQP A V D+G G+ Y N+F+A VDA+++AL G V +VV+E+GWP G + ENA+AYN LI H+ GTP PG ++ Y+FA+++E+ KPG +ER FGLF P+ Y + + P Sbjct: 137 SFPPSSAVFA-QPYMVDIARHLASTNAPLLANVYPYFAYSGNPRDIKLNYATFQPGATPVRDAGNGLIYTNLFNAMVDAMYAALEKAGAPSVRVVVSESGWPSAGG---FAATPENARAYNQGLIDHVAH--GTPKKPG-HMEAYVFAMFNENQKPGLETERHFGLFYPNKRPVYHINFAGGRLAP 315
BLAST of DC900404 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.309e-29 Identity = 70/177 (39.55%), Postives = 109/177 (61.58%), Query Frame = 3 Query: 6 SDPPSSGSFI-RQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDV 533 + PPS+G + +R IL FL P N YP+FAY+ +PR L F F P + V+ G+ Y N+FDA VD++++AL G V++V++E+GWP G + +NA+AYN LI H+ + G+P G ++++YIFA+++E+LK G E++FGLFKP++S AY + Sbjct: 159 TSPPSNGVLADKSGFLRPILNFLARPARPLLANVYPYFAYKGNPRDIQLTFATFVPGSTTVNDN-GLTYTNLFDAMVDSIYAALEKAGTPGVKVVISESGWP---SDQGFGATAQNARAYNQGLINHVGN--GSPKKAG-ALESYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 328 The following BLAST results are available for this feature:
BLAST of DC900404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900404 ID=DC900404; Name=DC900404; organism=Citrus sinensis; type=EST; length=1138bpback to top |