DC900401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.990e-42 Identity = 62/116 (53.45%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 372 TLY HS RQFY C + GT+DFIFG+AA VFQ C I R+P NQ N +TAQG+ DPNQ++G+ IQ+C I A +++A TYLGRPWK +S TV+M++ I V+ P+GW W Sbjct: 409 TLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNVIA-----PTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSW 519 HSP 2 Score: 57.7658 bits (138), Expect = 3.990e-42 Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 2 Query: 395 TLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTG 553 ++ Y EY+NTG G+D + RVKW+ +K + S AEA +T A + G+ W+ +TG Sbjct: 528 SIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATG 580
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 8.849e-42 Identity = 67/117 (57.26%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRI-GATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 372 TLYVHS RQF+ C I GTVDFIFGNAAAV QNC I AR P PN N +TAQ R +PNQ TGIVI + GA L G +TYLGRPW+ Y+RTVV+ + + +I P GW +W Sbjct: 295 TLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSRFNPNQTTGIVIHNSVVKGAPGVQL---GGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDW 407 HSP 2 Score: 67.0106 bits (162), Expect = 8.849e-42 Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 2 Query: 386 ALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 AL TL+Y EYQN+G G+ T NRV W+ F VI+ EA+ +T FI ++WL T PF++ L Sbjct: 412 ALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.403e-41 Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLYVHS RQFY C I GTVDFIFGNAA V QNC+I AR+P PN+ N +TAQGR DPNQ+TGI+I CR+ A SDL V+ S +T+LGRPWK+YSRTV +++ + +INPAGW EWSG+F + Sbjct: 329 TLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFAL 449 HSP 2 Score: 86.6557 bits (213), Expect = 9.044e-17 Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 2 Query: 359 GGMNGVGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 G M G+FAL+TL+YAEY NTG G+ T+NRVKW + V+TS ++ +T NFIAG++WL +T PF+ GL Sbjct: 439 GWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.558e-41 Identity = 65/117 (55.56%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 375 TLYVH+ RQFY C I GTVDFIFGN AV QNC + R+P NQ MVTAQGR +P Q IV+Q C I +D ++ +TYLGRPWK YSRT++MQS I I P GW W+ Sbjct: 187 TLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWN 303 HSP 2 Score: 51.2174 bits (121), Expect = 2.558e-41 Identity = 25/68 (36.76%), Postives = 34/68 (50.00%), Query Frame = 2 Query: 374 VGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAG-STWLGSTGFPFSLGL 574 + NF DT +YAEYQN G GA R+ W F+ + AQ +TA +I WL P+ G+ Sbjct: 304 ITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.058e-40 Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEF 384 TLY HS RQ+Y +C + GTVDFIFG VFQ C I R+P PNQ N +TA+G + NQNTGI I +C I ++ A TYLGRPWK +S+TV+MQS I +NPAGW W+ + Sbjct: 789 TLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNVTAT-----TYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTY 903 HSP 2 Score: 51.2174 bits (121), Expect = 6.058e-40 Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 2 Query: 395 TLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAG-STWL 541 T+FY EY+N+G G+D S RVKW+ +K I+S EA +T F+ G W+ Sbjct: 909 TIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 7.698e-40 Identity = 76/122 (62.30%), Postives = 92/122 (75.41%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLYVHS RQFY C + GTVDFIFGNAAAV QNC+I ARRP ++ N +TAQGR DPNQNTGI+I R+ A SDL V GS +TYLGRPW++YSRTV M++ + +I+P GW EW G F + Sbjct: 331 TLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPR-SKTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFAL 451 HSP 2 Score: 80.4925 bits (197), Expect = 6.482e-15 Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 359 GGMNGVGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 G + GNFAL TLFYAE+QNTG GA TS RV W F+V+ SA+EA +T F+AG +W+ S+ PF+ GL Sbjct: 441 GWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.240e-39 Identity = 77/126 (61.11%), Postives = 93/126 (73.81%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVK-GSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCIGHI 399 TLY H++RQFY C I+GTVDFIFG+A VFQNC I A++ PNQ+N +TAQGR DPN+ TGI IQ C I A SDL A S TYLGRPWK YSRTV+MQS +S+VI P GW EW+G+F + + Sbjct: 337 TLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSL 462 HSP 2 Score: 70.0922 bits (170), Expect = 8.760e-12 Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 2 Query: 359 GGMNGVGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 565 G + G+FAL++LFY EY N G GA +RVKW ++V + +A+ YT A FI G+ WL STG ++ Sbjct: 449 GWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYT 517
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 8.511e-39 Identity = 74/121 (61.16%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 28 LYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 LYVHS RQF+ C I GTVDFIFGNAA + Q+C+I+AR+P Q+ +TAQ R DPNQNTGI I C++ AT DL A KGS+ TYLGRPWK YSR V M SD+ D I+P GW EW+G F + Sbjct: 404 LYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFAL 524 HSP 2 Score: 77.0258 bits (188), Expect = 7.166e-14 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 359 GGMNGVGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 G + G FALD+L+Y EY N G G+ RVKW + VITS EA +T A FI+GS+WL STG F GL Sbjct: 514 GWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 8.511e-39 Identity = 74/122 (60.66%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLY HS+RQF+ CII GTVDFIFG+A AVFQ+C I A++ PNQ+N +TAQGR DPN+ TG IQ I A +DLL + TYLGRPWK YSRTV MQ+ +SD INP GW EW+G F + Sbjct: 343 TLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFAL 464 HSP 2 Score: 77.411 bits (189), Expect = 5.487e-14 Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 2 Query: 356 LGGMNGVGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 +G + GNFALDTL+Y EY N+G GA RVKW + V+ ++AEA +T + I G+ WL STG F GL Sbjct: 453 VGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.738e-37 Identity = 69/122 (56.56%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 T+YVHS +QFY C I GTVDFIFG+A+ VFQNC ++ARRPNPNQ+ + TAQGR++ + TGI I RI A DL+ V+ +F+ YLGRPW+ YSRTV+M+S I D+++PAGW +W +F + Sbjct: 336 TIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFAL 457 HSP 2 Score: 69.707 bits (169), Expect = 1.144e-11 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 359 GGMNGVGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 G + +FAL+TL+Y EY N G G++ +NRV+W FK I + EA ++ FI G+ WL ST PF+L L Sbjct: 447 GWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPFTLDL 518 The following BLAST results are available for this feature:
BLAST of DC900401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900401 ID=DC900401; Name=DC900401; organism=Citrus sinensis; type=EST; length=576bpback to top |