DC900399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.691e-30 Identity = 91/242 (37.60%), Postives = 133/242 (54.96%), Query Frame = 1 Query: 97 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALA-AVYHQIVIRAIPFKSR 813 +F++A AEF+A +F+ ++V + + S V + I+ FG I +V C ISGGHINPAVT ++ RK+S+ ++VFY+ QCLGA+ GAG++ +GG HG T G GL E+I TF LV+T+F++ D+KR + V L IGF+V + HL I TG +NPARS G A+I N ++ W + + P IGA LA A+Y + + K R Sbjct: 36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPP---NVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHW-----IYWVGPIIGAVLAGALYEYVFCPDVELKRR 264
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 2.208e-30 Identity = 90/242 (37.19%), Postives = 135/242 (55.79%), Query Frame = 1 Query: 97 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALA-AVYHQIVIRAIPFKSR 813 +F++A AEF+A +F+ +++ + + + K V + I+ FG I +V C ISGGHINPAVT ++ RK+S+ ++VFY+ QCLGA+ GAG++ +GG + HG T G GL E+I TF LV+T+F++ D+KR + V L IGF+V + HL I TG +NPARS G A+I N ++ W + + P IGA LA +Y + + FK R Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHW-----IYWVGPIIGAVLAGGLYEYVFCPDVEFKRR 261
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.884e-30 Identity = 91/242 (37.60%), Postives = 133/242 (54.96%), Query Frame = 1 Query: 97 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALA-AVYHQIVIRAIPFKSR 813 +F++A AEF+AT +F+ + V + + S V + I+ FG I +V C ISGGHINPAVT ++ RK+S+ ++VFY++ QCLGA+ GAG++ +GG HG T G GL E+I TF LV+T+F++ D+KR + V L IGF+V + HL I TG +NPARS G A+I N + W + + P +GA LA A+Y + + K R Sbjct: 33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHW-----IYWVGPIMGAVLAGALYEYVFCPDVELKRR 261
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.431e-29 Identity = 89/233 (38.20%), Postives = 130/233 (55.79%), Query Frame = 1 Query: 97 SFYRAGIAEFMATFLFLYITV-LTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALAAVYHQIV 786 +F++A AEF+A +F+ +++ T+ K N V + I+ FG I +V C ISGGHINPAVT ++ RK+S+ ++VFY+ QCLGA+ GAG++ +GG HG T G GL E+I TF LV+T+F++ D+KR + V L IGF+V + HL I TG +NPARS G A+I N ++ W + + P IGA LA ++ V Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHW-----IYWVGPIIGAVLAGGLYEYV 251
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 4.164e-29 Identity = 91/238 (38.24%), Postives = 131/238 (55.04%), Query Frame = 1 Query: 82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKS-NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALAAVYHQIVI 789 EL+S SF+RA +AEF+ + L+ T++G+ S G+ G A AFG LV +SGGHINPA+T LLA +LSL RA+ Y++ Q LGA+ GAGV+ G + LG A + G G G E++ T + VF++ D + + R P A LP+GF++ L HL IP TG G+NPARS A+I N + W + P +GAALAA+ +++ + Sbjct: 3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVG--PGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRNFTNHW-----VFWAGPLLGAALAALLYELAL 223
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 4.164e-29 Identity = 85/235 (36.17%), Postives = 128/235 (54.47%), Query Frame = 1 Query: 82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNK--DHAWG*PLDLSGLDPFIGAALAAVYH 777 E+ S +F +A AEF+AT +F++ + + + + I IA AFG I L +SGGHINPA+T LL+ ++SL RAVFY+V Q +GA+ GAG++ G L N + + T G + E+I TF L +FS+TD++R + P+ +P L IG +V L HL I TG +NPARS G A++ N+ W + + P +GAA+AA+ + Sbjct: 4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNL--AVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHW-----VFWVGPIVGAAVAAILY 221
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 4.604e-28 Identity = 84/232 (36.21%), Postives = 129/232 (55.60%), Query Frame = 1 Query: 97 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-NKDHAWG*PLDLSGLDPFIGAALAAVYHQIV 786 +F++A AEF+A +F+ +++ + + + K V + I+ FG I +V C ISGGHINPAVT ++ R++S+ ++VFY+ QCLGA+ GAG++ +GG HG + G GL E+I TF LV+T+F++ D+KR + V L IG +V + HL I TG +NPARS G A+I N ++ W + + P IGA LA ++ V Sbjct: 33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHW-----IYWVGPIIGAVLAGGLYEYV 251
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.026e-27 Identity = 81/235 (34.47%), Postives = 127/235 (54.04%), Query Frame = 1 Query: 82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNK--DHAWG*PLDLSGLDPFIGAALAAVYH 777 E+ S +F++A AEF+AT +F++ + + + + I I+ AFG I L +SGGHINPA+T LL+ ++SL RA+FY+ Q +GA+ GAG++ L N +++ T G + E+I TF L +FS+TD++R + P+ +P L IG +V L HL I TG +NPARS G A++ N+ W + + P +GA LAA+ + Sbjct: 4 EVCSVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNL--AVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHW-----VFWVGPIVGAVLAAILY 221
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.750e-27 Identity = 84/236 (35.59%), Postives = 128/236 (54.24%), Query Frame = 1 Query: 82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAII---FNKDHAWG*PLDLSGLDPFIGAALAAVYH 777 E+ S +F +A AEF+AT +F++ + + + + + I+ AFG I + +SGGH+NPA+T LL+ ++SL RAVFY+V Q +GA+ GA ++ G L N + + T G + AE+I TF L VFS+TD++R + P+ +P L IG +V L HL I TG +NPARS G A+I F+ H W + + P +GAA AA+ + Sbjct: 4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNL--AVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSSAH-W-----VFWVGPIVGAATAAIIY 221
BLAST of DC900399 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.285e-27 Identity = 82/235 (34.89%), Postives = 126/235 (53.62%), Query Frame = 1 Query: 82 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNK--DHAWG*PLDLSGLDPFIGAALAAVYH 777 E+ S +F++A AEF+AT +F++ + + + + I I+ AFG I L +SGGHINPA+T LL+ ++SL RAVFY+ Q +GA+ GAG++ L N + + T G + E+I TF L +FS+TD++R + P+ +P L IG +V L HL I TG +NPARS G A++ N+ W + + P +GA LAA+ + Sbjct: 4 EVCSLAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNL--AVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHW-----VFWVGPIVGAMLAAILY 221 The following BLAST results are available for this feature:
BLAST of DC900399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900399 ID=DC900399; Name=DC900399; organism=Citrus sinensis; type=EST; length=998bpback to top |