DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.595e-38
Identity = 89/202 (44.06%), Postives = 124/202 (61.39%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVAS-PEVKFTEPQ-VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +IVA+KK+R +N E        REI +L+ L HPN++ L  L        LYL+F ++  DL   + S P  ++ E   VK Y++Q+L G+  CH   VLHRD+K  NLLID  GV+K+ADFGLA  F    +   T  VVTLWYR PE+LLG+  Y   VD+WS G I AE+ + KP+  G +E++QL +I +L G+P+ E
Sbjct:   28 QIVAMKKIRLENEEEGVPSTAIREISLLKELQHPNIVCL--LDVLMQDSRLYLIFEFLSMDLKKYLDSIPSGQYLEAMLVKSYLYQILQGIIFCHARRVLHRDLKPQNLLIDSKGVIKLADFGLARAFGIPVR-VYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIASKKPLFHGDSEIDQLFRISELWGTPNNE 226          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.595e-38
Identity = 80/200 (40.00%), Postives = 122/200 (61.00%), Query Frame = 2
Query:    5 IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLV--ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            +VA+KK+R ++ +        REI +L+ L HPNV+ LE ++       LYL+F ++ +DL   +   S E       +K Y  Q+L  +  CH   V+HRD+K  NLL+D+ G +K+ADFGLA       +   T  VVTLWYR PE+L+GA  Y +GVD+WS GCI AE+   KP+  G +E+++L +I+++ G+P+E
Sbjct:   41 MVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENR--LYLIFEFLSYDLKRYMDTLSKEEYLPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEKGAIKLADFGLARAIGIPIR-VYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRILGTPTE 237          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.595e-38
Identity = 92/220 (41.82%), Postives = 129/220 (58.64%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVK--------------------FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            +IVALKK+R +  E E V   A REI +L+ +  PN+++L  +V +     LYLVF +++ DL   + +  V                       E  VK +M QL+ G+ +CH++ VLHRD+K  NLLID +G LK+ADFGLA  F    +   T  VVTLWYR PE+LLG   Y  GVD+WS G I AE+   KP+ PG +E++++ KI+KL G+P E
Sbjct:   29 RIVALKKIRLE-AEDEGVPSTAIREISLLKEMHDPNIVRLLNIVHAD-GHKLYLVFEFLDLDLKKYMEALPVSEGGRGKALPDGSTLDMNRLGLGEAMVKKFMAQLVEGIRYCHSHRVLHRDLKPQNLLIDREGNLKLADFGLARAFGVPLR-TYTHEVVTLWYRAPEILLGGRQYSTGVDMWSVGAIFAEMCTRKPLFPGDSEIDEIFKIFKLLGTPDE 245          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK20_RAT (Cell division protein kinase 20 OS=Rattus norvegicus GN=Cdk20 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.083e-38
Identity = 87/199 (43.72%), Postives = 114/199 (57.29%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            +IVALKKV    LE        REI  L+ + D   V++L+ +          L F +M  DLA +V   +      QVK Y+  LL G+  CH N ++HRD+K +NLLI   G LKIADFGLA  F P+     T +V T WYR PELL GA  Y  GVDLW+ GCI+ ELL G P+ PG  ++EQL  + ++ G+PS
Sbjct:   28 EIVALKKVALRRLEDGIPNQALREIKALQEIEDSQYVVQLKAVFPH--GAGFVLAFEFMLSDLAEVVRHAQRPLAPAQVKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGGRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCIMGELLNGSPLFPGENDIEQLCCVLRILGTPS 224          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK20_MOUSE (Cell division protein kinase 20 OS=Mus musculus GN=Cdk20 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.083e-38
Identity = 87/199 (43.72%), Postives = 114/199 (57.29%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            +IVALKKV    LE        REI  L+ + D   V++L+ +          L F +M  DLA +V   +      QVK Y+  LL G+  CH N ++HRD+K +NLLI   G LKIADFGLA  F P+     T +V T WYR PELL GA  Y  GVDLW+ GCI+ ELL G P+ PG  ++EQL  + ++ G+PS
Sbjct:   28 EIVALKKVALRRLEDGIPNQALREIKALQEIEDSQYVVQLKAVFPH--GAGFVLAFEFMLSDLAEVVRHAQRPLAPAQVKSYLQMLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGGRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCIMGELLNGSPLFPGENDIEQLCCVLRILGTPS 224          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.083e-38
Identity = 82/199 (41.21%), Postives = 127/199 (63.82%), Query Frame = 2
Query:    5 IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +VALK++R ++ E      + RE+ +L+ L H N++ L  +V +  S  L LVF Y++ DL   +       +   VK +++Q+L GL +CH   VLHRD+K  NLLI++ G LK+ADFGLA       K   ++ VVTLWYRPP++LLG+++Y   +D+W  GCI  E+ +G+P+ PG T  ++LH I++L G+PS+E
Sbjct:  217 LVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDIVHTDKS--LTLVFEYLDKDLKQYMDDCGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQE 411          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.721e-38
Identity = 89/201 (44.28%), Postives = 123/201 (61.19%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL-AGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +IVALK+VR D+ +        REI +L+ L H N+++L  ++ S     L LVF + + DL     S         VK  + QLL GL  CH+  VLHRD+K  NLLI+ +G LK+ADFGLA  F    +   ++ VVTLWYRPP++L GA  Y   +D+WSAGCI AEL  AG+P+ PG    +QL +I++L G+P+EE
Sbjct:   28 EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE 225          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.721e-38
Identity = 89/201 (44.28%), Postives = 124/201 (61.69%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL-AGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +IVALK+VR D  +        REI +L+ L H N+++L  ++ S     L LVF + + DL     S          + +M QLL GL  CH++ VLHRD+K  NLLI+ +G LK+ADFGLA  F    K   ++ VVTLWYRPP++L GA  Y   +D+WSAGCI AEL  AG+P+ PG   ++QL KI+++ G+P+EE
Sbjct:   28 EIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKK--LTLVFEHCDQDLKKYFDSLNGDIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK-CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELADAGRPLFPGSDVLDQLMKIFRVLGTPTEE 225          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK5_DROME (Cell division protein kinase 5 homolog OS=Drosophila melanogaster GN=Cdk5 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 2.721e-38
Identity = 89/201 (44.28%), Postives = 126/201 (62.69%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL-AGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +IVALK+VR D  +        REI +L+ L H N+++L  ++ S     L LVF + + DL     S   +      + +M QLL GL  CH++ VLHRD+K  NLLI+ +G LK+ADFGLA  F    K   ++ VVTLWYRPP++L GA  Y   +D+WSAGCILAEL  AG+P+ PG   ++QL KI+++ G+P+E+
Sbjct:   28 EIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLIDVLHSDKK--LTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK-CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAELADAGRPLFPGSDVLDQLMKIFRVLGTPNED 225          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.641e-38
Identity = 86/200 (43.00%), Postives = 123/200 (61.50%), Query Frame = 2
Query:    5 IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGL--VASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            +VALK++  D+ E  +     REI +++ LDH N++ L  ++ +     L LVF YM+ DL     V   +       VK +M QLL G+  CH+N VLHRD+K  NLLI++ G LK+ DFGLA  F     +  ++ VVTLWYR P++LLG+  Y   +D+WSAGCI AE+  GKP+ PG    +QL KI++L G+P+E
Sbjct:   33 LVALKEISLDS-EEGTPSTAIREISLMKELDHENIVTLYDVIHTENK--LTLVFEYMDKDLKKYMEVHGQQSALDLKVVKSFMFQLLKGIMFCHDNRVLHRDLKPQNLLINNKGELKLGDFGLARAFGIPF-NTFSNEVVTLWYRAPDVLLGSRAYTTSIDIWSAGCIFAEMCTGKPLFPGTANEDQLIKIFRLMGTPNE 228          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_RANDY1.595e-3844.06Cell division control protein 2 homolog OS=Rana dy... [more]
CDC2_CAEBR1.595e-3840.00Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2_AJECA1.595e-3841.82Cell division control protein 2 OS=Ajellomyces cap... [more]
CDK20_RAT2.083e-3843.72Cell division protein kinase 20 OS=Rattus norvegic... [more]
CDK20_MOUSE2.083e-3843.72Cell division protein kinase 20 OS=Mus musculus GN... [more]
CDK17_MOUSE2.083e-3841.21Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDK5_RAT2.721e-3844.28Cell division protein kinase 5 OS=Rattus norvegicu... [more]
CDK5_GLOMM2.721e-3844.28Cell division protein kinase 5 homolog OS=Glossina... [more]
CDK5_DROME2.721e-3844.28Cell division protein kinase 5 homolog OS=Drosophi... [more]
PHO85_CANAL4.641e-3843.00Negative regulator of the PHO system OS=Candida al... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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