DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK7_CARAU (Cell division protein kinase 7 OS=Carassius auratus GN=cdk7 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.641e-38
Identity = 88/203 (43.35%), Postives = 126/203 (62.07%), Query Frame = 2
Query:    5 IVALKKVRFDNLEPESV---KFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            IVA+KK++  +         +   REI +L+ L HPN+I L      + + SL     +ME DL  ++    +  T   +K Y+   L GLE+ HN+ +LHRD+K +NLL+D++GVLK+ADFGLA  F  PN  +  T +VVT WYR PELL GA  YGVGVD+W+ G ILAELL   P + G ++++QL  I++  G+P+EE
Sbjct:   37 IVAIKKIKVGHRTEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLLC---FMETDLEVIIKDTSLVLTPANIKAYILMSLQGLEYMHNHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVY--THQVVTRWYRAPELLFGARMYGVGVDMWAVGSILAELLLRVPFLAGDSDLDQLTGIFEALGTPTEE 234          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 7.917e-38
Identity = 85/202 (42.08%), Postives = 124/202 (61.39%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVAS-PEVKFTEPQ-VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            ++VA+KK+R +N E        REI +L+ L HPN++ L  L        LYL+F ++  DL   + S P  ++ +   VK Y++Q+L G+  CH+  VLHRD+K  NLLID+ GV+K+ADFGLA  F    +   T  VVTLWYR  E+LLG+  Y   VD+WS G I AE+   KP+  G +E++QL +I++  G+P+ E
Sbjct:   28 QVVAMKKIRLENEEEGVPSTAIREISLLKELQHPNIVCL--LDVLMQDSRLYLIFEFLSMDLKKYLDSIPSGQYIDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR-VYTHEVVTLWYRASEVLLGSVRYSTPVDVWSVGTIFAEIATKKPLFHGDSEIDQLFRIFRSLGTPNNE 226          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.034e-37
Identity = 89/201 (44.28%), Postives = 127/201 (63.18%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQ-VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            ++VALKK+R   LE + V   A REI +L+ + HPNV+ L  ++  +    LYLVF Y++ DL   + S  V    PQ +K Y++QLL GL + H + +LHRD+K  NLLID  G LK+ADFGLA       +   T  +VTLWYR PE+LLG+  Y V VD+WS GCI  E+L  KP+  G  E++Q+ +I+++ G+P +
Sbjct:   34 RMVALKKIR---LEDDGVPSTALREISLLKEVPHPNVVSLFDVLHCQNR--LYLVFEYLDQDLKKYMDS--VPALCPQLIKSYLYQLLKGLAYSHGHRILHRDLKPQNLLIDRQGALKLADFGLARAVSIPVR-VYTHEIVTLWYRAPEVLLGSKSYSVPVDMWSVGCIFGEMLNKKPLFSGDCEIDQIFRIFRVLGTPDD 226          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKD3_ARATH (Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana GN=CDKD-3 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.764e-37
Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF-DPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+R    + E V   A REI +L+ L HP++I L      + +  L+LVF +ME DL  ++    +  +   +K Y+     GL +CH+  VLHRD+K +NLLI  DG LK+ADFGLA  F  PN K   T +V   WYR PELL GA  YG  VD+W+  CI AELL  +P + G ++++QL KI+   G+P  +
Sbjct:   38 VAIKKIRLGK-QREGVNITALREIKMLKELKHPHIILLIDAFPHKEN--LHLVFEFMETDLEAVIRDSNIFLSPADIKSYLLMTFKGLAYCHDKWVLHRDMKPNNLLIGVDGQLKLADFGLARIFGSPNRK--FTHQVFARWYRAPELLFGAKQYGAAVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKAD 232          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.764e-37
Identity = 85/200 (42.50%), Postives = 118/200 (59.00%), Query Frame = 2
Query:    5 IVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            IVALK++R +++E        REI IL+ L H N+++L  +  S     L LVF YME DL   +           ++ +M  LL G+  CH   VLHRD+K  NLLI  +  LK+ADFGL   F  P  K+  T  VVTLWYR P++LLG+T YG  VD+WS GCI AE+  G P+  G+ + +QL +I++  G+PS +
Sbjct:   30 IVALKRIRLESVEEGVPCTAIREISILKELRHENIVRLLDVCHSENR--LNLVFEYMEMDLKKYMDRASGNLDPATIQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISREKELKLADFGLGRAFGIPVKKY--THEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFAGKNDADQLLRIFRFLGTPSSQ 225          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDC28_YEAST (Cell division control protein 28 OS=Saccharomyces cerevisiae GN=CDC28 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.304e-37
Identity = 87/202 (43.07%), Postives = 125/202 (61.88%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVAS--PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            ++VALKK+R ++ E E V   A REI +L+ L   N+++L  +V S     LYLVF +++ DL   +     +       VK +M QL  G+ +CH++ +LHRD+K  NLLI+ DG LK+ DFGLA  F    +   T  +VTLWYR PE+LLG   Y  GVD WS GCI AE+   KPI  G +E++Q+ KI+++ G+P+E
Sbjct:   35 RVVALKKIRLES-EDEGVPSTAIREISLLKELKDDNIVRLYDIVHSDAH-KLYLVFEFLDLDLKRYMEGIPKDQPLGADIVKKFMMQLCKGIAYCHSHRILHRDLKPQNLLINKDGNLKLGDFGLARAFGVPLR-AYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNE 233          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.929e-37
Identity = 85/205 (41.46%), Postives = 128/205 (62.44%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLA------GLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            ++VALK++  D+ E  +     REI +++ LDH N++ L  ++ +     L LVF +M+ DL       G   + ++K     VK ++ QLL G+  CH+N VLHRD+K  NLLI++ G LK+ DFGLA  F     +  ++ VVTLWYR P++LLG+  Y   +D+WSAGCI AE+  GKP+ PG +  +QL KI++L G+P+E
Sbjct:   32 QLVALKEINLDS-EEGTPSTAIREISLMKELDHENIVTLYDVIHTENK--LTLVFEFMDKDLKKYMEAHGNQGALDLKI----VKSFIFQLLKGIMFCHDNRVLHRDLKPQNLLINNKGELKLGDFGLARAFGIPF-NTFSNEVVTLWYRAPDVLLGSRAYTASIDIWSAGCIFAEMCTGKPLFPGTSNDDQLIKIFRLMGTPNE 228          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: PHO85_YEAST (Cyclin-dependent protein kinase PHO85 OS=Saccharomyces cerevisiae GN=PHO85 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 5.132e-37
Identity = 85/202 (42.08%), Postives = 123/202 (60.89%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQ-----VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            VALK+V+ D+ E  +     REI +++ L H N+++L  ++ +     L LVF +M++DL   + S  V  T        VK +  QLL GL  CH N +LHRD+K  NLLI+  G LK+ DFGLA  F     +  +S VVTLWYR P++L+G+  Y   +D+WS GCILAE++ GKP+ PG  + EQL  I+ + G+P+E
Sbjct:   33 VALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENK--LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 5.132e-37
Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEP--QVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +IVALK +R D  +  +     REI +++ L HPN++ L  ++ +     L LVF YME DL   + +   +   P  QVK +  QLL G+  CH N VLHRD+K  NLLI+  G LK+ADFGLA S   P   +  ++ VVTLWYR P++LLG+  Y   +D+WS GCI+AE+  G+P+  G    +QL KI++L G+P+E+
Sbjct:   27 EIVALKVIRID-ADEGTPSTAIREISLMKELRHPNIMSLSDVLQTENK--LMLVFEYMEKDLKKYMDTYGNQGALPPSQVKNFTQQLLKGISFCHENRVLHRDLKPQNLLINSRGELKLADFGLARSIGIP--VNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEMATGRPLFAGSNNEDQLLKIFRLLGTPTEQ 224          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 5.132e-37
Identity = 93/208 (44.71%), Postives = 124/208 (59.62%), Query Frame = 2
Query:    5 IVALKKVRFDNLEPESVKFMAREILILRRLDH-PNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLVAS---PEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV-LKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            IVALKK R    E        REI ILR L   P++++L  +   +       LYLVF Y++ DL   + S         +  VKC M+QL  G+  CH +GVLHRD+K  NLL+D   + LKIAD GLA  F  P  K+  T  ++TLWYR PE+LLGAT Y  GVD+WS GCI AEL+  + I  G +E++QL +I++L G+P+EE
Sbjct:   41 IVALKKTRLHEDEEGVPPTTLREISILRMLARDPHIVRLMDVKQGINKEGKTVLYLVFEYVDTDLKKFIRSFRQAGQNIPQNTVKCLMYQLCKGMAFCHGHGVLHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPMKKY--THEILTLWYRAPEVLLGATHYSTGVDMWSVGCIFAELVTKQAIFAGDSELQQLLRIFRLLGTPNEE 246          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK7_CARAU4.641e-3843.35Cell division protein kinase 7 OS=Carassius auratu... [more]
CDC2B_XENLA7.917e-3842.08Cell division control protein 2-B OS=Xenopus laevi... [more]
CDC2_DICDI1.034e-3744.28Cell division control protein 2 homolog OS=Dictyos... [more]
CDKD3_ARATH1.764e-3742.50Cyclin-dependent kinase D-3 OS=Arabidopsis thalian... [more]
CC2H1_TRYCO1.764e-3742.50Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDC28_YEAST2.304e-3743.07Cell division control protein 28 OS=Saccharomyces ... [more]
PHO85_DEBHA3.929e-3741.46Negative regulator of the PHO system OS=Debaryomyc... [more]
PHO85_YEAST5.132e-3742.08Cyclin-dependent protein kinase PHO85 OS=Saccharom... [more]
PEF1_SCHPO5.132e-3742.86Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
CKB22_ARATH5.132e-3744.71Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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