DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK06_HUMAN (Mitogen-activated protein kinase 6 OS=Homo sapiens GN=MAPK6 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.264e-35
Identity = 86/205 (41.95%), Postives = 124/205 (60.49%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC------------SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 571
            K VA+KK+     +P+SVK   REI I+RRLDH N++K+  ++    S             S+Y+V  YME DLA ++    +   E   + +M+QLL GL++ H+  VLHRD+K +NL I+ +D VLKI DFGLA   DP++ H   ++  +VT WYR P LLL   +Y   +D+W+AGCI AE+L GK +  G  E+EQ+  I
Sbjct:   44 KRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPL--LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 244          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: BUR1_KLULA (Serine/threonine-protein kinase BUR1 OS=Kluyveromyces lactis GN=BUR1 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.264e-35
Identity = 87/219 (39.73%), Postives = 119/219 (54.34%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKL--------------------------------EGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF---DPNHKHP--------MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            REI IL+R++H N++KL                                + L+T +     +++  YM  DL GL+ +P V+F    VK  M QLL G+ + H N  LHRDIK +N+LID  GV+KIADFGLA  +    PN K+P         TS VVT WYR PE++LG   Y   VD+W  GC+ AE    KPI+ G+T+++Q H I+KL G+PS
Sbjct:  101 REITILKRMNHKNIVKLIEIVYDESPTPKTDSTSPRPVGNYHGNNTANQQKLITGK---HFFMILPYMVSDLTGLLHNPRVEFGMADVKNIMLQLLEGINYIHCNKFLHRDIKTANILIDHKGVVKIADFGLARNYYGSPPNLKYPGGAGSGAKYTSVVVTRWYRAPEIVLGDRHYTTAVDIWGIGCVFAEFFEKKPILQGQTDIDQGHVIFKLMGTPS 316          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.156e-35
Identity = 83/198 (41.92%), Postives = 118/198 (59.60%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            VALK++R D+ E E V   A REI +L+ L H N++KL  +  S     L +VF Y++ DL   +           ++ +M  LL G+  CH   VLHRD+K  NLLI  +  LK+ DFGL  SF  P  K   T+ VVTLWYRPP++LLG+  YG  VD+WS GCI +E+  G P+  G+ + +QL +I++  G+P+
Sbjct:   31 VALKRIRLDS-EEEGVPCTAIREISLLKELRHENIVKLLDVCHSEHR--LTIVFEYLDLDLKKYLDRENGNLDAATIQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISREKELKLGDFGLGRSFAIPVRK--FTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEMATGTPLFAGKNDADQLMRIFRFLGTPN 223          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: PHO85_KLULA (Negative regulator of the PHO system OS=Kluyveromyces lactis GN=PHO85 PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.816e-35
Identity = 81/203 (39.90%), Postives = 122/203 (60.10%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLV-----ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VALK+V+ D+ E  +     REI +++ L H N+++L  ++ +     L LVF +M++DL   +      +         VK +  QLL G+  CH N +LHRD+K  NLLI++ G LK+ DFGLA  F     +  +S VVTLWYR P++L+G+ +Y   +D+WS GCILAE++ GKP+ PG  + EQL  I+   G+P E+
Sbjct:   33 VALKEVKLDS-EEGTPSTAIREISLMKELKHDNIVRLFDVIHTENK--LTLVFEFMDNDLKKFMDNRNKGNSHKGLEMDLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNRGQLKLGDFGLARAFGIP-VNTFSSEVVTLWYRAPDVLMGSRNYCTSIDIWSCGCILAEMIMGKPLFPGSNDEEQLKLIFDTMGTPVEQ 231          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.678e-35
Identity = 82/203 (40.39%), Postives = 123/203 (60.59%), Query Frame = 2
Query:    8 VALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS---LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+   FDN      K   REI +LR +DH N++ +  ++   +  +   +Y+ +  M+ DL  ++ S +   +E   + +++Q+L GL++ H+  VLHRD+K SNLL++ +  LKI DFGLA     +    MT  VVT WYR PELLL ++DY   +D+WS GCI  EL+  KP+ PGR  V QL  + +L G+PSEE
Sbjct:   89 VAIKKIANAFDN--KIDAKRTLREIKLLRHMDHENIVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRSNQA-LSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARV--TSESDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEE 286          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MHK_ARATH (Serine/threonine-protein kinase MHK OS=Arabidopsis thaliana GN=MHK PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.678e-35
Identity = 82/197 (41.62%), Postives = 124/197 (62.94%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 592
            ++VA+KK++      E    + RE+  LR+L+HP++IKL+ +V  R    L+ +F  M+H+L  ++   E  F+E +++ +M Q+L GL H H NG  HRD+K  NLL+ ++ +LKIADFGLA   +     P T  V T WYR PE+LL ++ Y   VD+W+ G ILAEL A  P+ PG +E++QL+KI  + G P
Sbjct:   36 EVVAVKKMKRKFYYWEECVNL-REVKALRKLNHPHIIKLKEIV--REHNELFFIFECMDHNLYHIMKERERPFSEGEIRSFMSQMLQGLAHMHKNGYFHRDLKPENLLVTNN-ILKIADFGLAR--EVASMPPYTEYVSTRWYRAPEVLLQSSLYTPAVDMWAVGAILAELYALTPLFPGESEIDQLYKICCVLGKP 226          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.678e-35
Identity = 85/200 (42.50%), Postives = 117/200 (58.50%), Query Frame = 2
Query:    5 IVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            IVA+K++R +  E E V   A REI IL+ L H N+++L  +  S     L LVF  ME DL   +           ++ +M  LLSG+  CH   VLHRD+K  NLLI  +  LK+ADFGL   F    K   T  VVTLWYR P++LLG+T YG  VD+WS GCI AE+  G P+  G+ + +QL +I++  G+P+ +
Sbjct:   30 IVAVKRIRLEK-EEEGVPCTAIREISILKELRHENIVRLLDVCHSEKR--LTLVFECMEMDLKKYMDHVGGDLDAGTIQEFMRSLLSGVRFCHERNVLHRDLKPPNLLISREKELKLADFGLGRAFGIPVKK-FTQEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFTGKNDADQLLRIFQFLGTPNRQ 225          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: BUR1_CANGA (Serine/threonine-protein kinase BUR1 OS=Candida glabrata GN=BUR1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.678e-35
Identity = 91/232 (39.22%), Postives = 126/232 (54.31%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCS-----------------------LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFF---DPNHKHP--------MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            VA+K++   N E +     A REI IL+RL+H N+IKL  +V      S                        Y++  YM  DL+G++ +P ++     +K  M Q+L G+   H +  +HRDIK +NLLID +GVLK+ADFGLA  +    PN K P         TS VVT WYR PEL+LG   Y   VD+W  GC+ AE    KPI+ G+T+++Q H I+KL G+P E
Sbjct:   86 VAMKRI-IVNQENDLFPITAQREITILKRLNHKNIIKLLEMVYDFPPESNNKDYAQFNQNNSANPPAVPKKFFYMILPYMVADLSGILHNPRIELKMADIKNMMKQILEGVNFIHCSKFMHRDIKTANLLIDHNGVLKLADFGLARQYYGSPPNIKFPGSAGSGAKYTSVVVTRWYRAPELVLGDKYYTTAVDIWGVGCVFAEFFEKKPILQGKTDIDQGHVIFKLMGTPDE 316          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKL4_HUMAN (Cyclin-dependent kinase-like 4 OS=Homo sapiens GN=CDKL4 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.803e-35
Identity = 76/195 (38.97%), Postives = 111/195 (56.92%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCG 586
            ++VA+KK      +P   K   REI +L++L HPN++ L  +   R    ++LVF Y +H L   +        +  +K  + Q L  L  CH +  +HRDIK  N+LI   G++KI DFG A    P   +  T  V T WYR PELL+G T YG  VD+W+ GC+ AELL G+P+ PG+++V+QL+ I +  G
Sbjct:   28 QVVAVKKFVESEDDPVVKKIALREIRMLKQLKHPNLVNL--IEVFRRKRKMHLVFEYCDHTLLNELERNPNGVADGVIKSVLWQTLQALNFCHIHNCIHRDIKPENILITKQGIIKICDFGFAQILIPGDAY--TDYVATRWYRAPELLVGDTQYGSSVDIWAIGCVFAELLTGQPLWPGKSDVDQLYLIIRTLG 218          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: PHO85_ASHGO (Negative regulator of the PHO system OS=Ashbya gossypii GN=PHO85 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.273e-35
Identity = 82/204 (40.20%), Postives = 125/204 (61.27%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQ------VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VALK+V+ D+ E  +     REI +++ L H N+++L  ++ +     L LVF +M++DL   + S  +    P+      VK +  QLL G+  CH N +LHRD+K  NLLI++ G LK+ DFGLA  F     +  +S VVTLWYR P++L+G+  Y   +D+WS GCILAE++ GK + PG  + EQL  I++  G+P+E+
Sbjct:   35 VALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENK--LTLVFEFMDNDLKKFMDS-RLDREMPRGLELSLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNKGQLKLGDFGLARAFGIP-VNTFSSEVVTLWYRAPDVLMGSRTYCTSIDIWSCGCILAEMIMGKALFPGTNDDEQLKLIFETMGTPTEQ 233          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK06_HUMAN1.264e-3541.95Mitogen-activated protein kinase 6 OS=Homo sapiens... [more]
BUR1_KLULA1.264e-3539.73Serine/threonine-protein kinase BUR1 OS=Kluyveromy... [more]
CRK1_LEIME2.156e-3541.92Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]
PHO85_KLULA2.816e-3539.90Negative regulator of the PHO system OS=Kluyveromy... [more]
MPK6_ARATH3.678e-3540.39Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
MHK_ARATH3.678e-3541.62Serine/threonine-protein kinase MHK OS=Arabidopsis... [more]
CC2H1_TRYBB3.678e-3542.50Cell division control protein 2 homolog 1 OS=Trypa... [more]
BUR1_CANGA3.678e-3539.22Serine/threonine-protein kinase BUR1 OS=Candida gl... [more]
CDKL4_HUMAN4.803e-3538.97Cyclin-dependent kinase-like 4 OS=Homo sapiens GN=... [more]
PHO85_ASHGO6.273e-3540.20Negative regulator of the PHO system OS=Ashbya gos... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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