DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.273e-35
Identity = 82/203 (40.39%), Postives = 122/203 (60.10%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV-EQLHKIYKLCGSPSEE 601
            K+VALK +R    E E   F A RE  +L+ L H N++ L  ++ ++ +  L LVF Y+  DL   +           VK ++ QLL GL + H   +LHRD+K  NLLI D G LK+ADFGLA     P+H +  ++ VVTLWYRPP++LLG+T+Y   +D+W  GCI  E++ G    PG  ++ +QL +I+ + G+P+E+
Sbjct:  159 KLVALKVIRLQ--EEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKET--LTLVFEYVHTDLCQYMEQHPGGLHPDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY--SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNED 355          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: KIN28_YEAST (Serine/threonine-protein kinase KIN28 OS=Saccharomyces cerevisiae GN=KIN28 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.193e-35
Identity = 74/197 (37.56%), Postives = 115/197 (58.38%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            +A+K+++    +        RE+  L+ + HPNVI+L  +  +  +  L LV  ++  DL  ++    + FT   +K +M   L G+ HCH N +LHRD+K +NLL   DG +K+ADFGLA      H+  +TS VVT WYR PELL GA  Y   +D+WS G I AEL+   P +PG+ +V+Q+   ++  G+P++
Sbjct:   33 IAIKEIKTSEFKDGLDMSAIREVKYLQEMQHPNVIELIDIFMAYDN--LNLVLEFLPTDLEVVIKDKSILFTPADIKAWMLMTLRGVYHCHRNFILHRDLKPNNLLFSPDGQIKVADFGLARAIPAPHE-ILTSNVVTRWYRAPELLFGAKHYTSAIDIWSVGVIFAELMLRIPYLPGQNDVDQMEVTFRALGTPTD 226          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.193e-35
Identity = 91/209 (43.54%), Postives = 121/209 (57.89%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPN-VIKLEGLVTSRMS---CSLYLVFHYMEHDLAGLVASPEV---KFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV-LKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +IVALKK R    +        RE+ +LR L   + V++L  L   +       LYLVF YM+ DL   + +      K   P VK  M+QL  G+  CH  GVLHRD+K  NLL+D   + LKIAD GL+ SF  P  K+  T  ++TLWYR PE+LLGA  Y   VD+WS GCI AEL   +P+  G +EV+QL  I+KL G+P+E+
Sbjct:   52 RIVALKKTRLPEDDEGVPPTALREVSLLRMLSQDSHVVRLLDLKQGQNKEGQTILYLVFEYMDTDLKKFIRAHRQNLQKIPVPTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKY--THEILTLWYRAPEVLLGAAHYSTPVDIWSVGCIFAELATNQPLFAGDSEVQQLLHIFKLLGTPNEQ 258          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK15_HUMAN (Cell division protein kinase 15 OS=Homo sapiens GN=CDK15 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.193e-35
Identity = 86/203 (42.36%), Postives = 124/203 (61.08%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV-EQLHKIYKLCGSPSEE 601
            ++VALK +  +    E V F A RE  +L+ L H N++ L  ++ ++ +  L  VF YM  DLA  ++          V+ +M QLL GL + H+  VLHRD+K  NLLI   G LK+ADFGLA     P+  +  +S VVTLWYRPP+ LLGAT+Y   +D+W AGCI  E+  G+P+ PG + + EQL KI+++ G P+E+
Sbjct:   76 QLVALKVISMN--AEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKET--LTFVFEYMHTDLAQYMSQHPGGLHPHNVRLFMFQLLRGLAYIHHQHVLHRDLKPQNLLISHLGELKLADFGLARAKSIPSQTY--SSEVVTLWYRPPDALLGATEYSSELDIWGAGCIFIEMFQGQPLFPGVSNILEQLEKIWEVLGVPTED 272          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK14_HUMAN (Cell division protein kinase 14 OS=Homo sapiens GN=CDK14 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 8.193e-35
Identity = 82/203 (40.39%), Postives = 122/203 (60.10%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV-EQLHKIYKLCGSPSEE 601
            K+VALK +R    E E   F A RE  +L+ L H N++ L  ++ ++ +  L LVF Y+  DL   +           VK ++ QLL GL + H   +LHRD+K  NLLI D G LK+ADFGLA     P+H +  ++ VVTLWYRPP++LLG+T+Y   +D+W  GCI  E++ G    PG  ++ +QL +I+ + G+P+E+
Sbjct:  159 KLVALKVIRLQ--EEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKET--LTLVFEYVHTDLCQYMDKHPGGLHPDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY--SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNED 355          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.070e-34
Identity = 83/203 (40.89%), Postives = 122/203 (60.10%), Query Frame = 2
Query:    8 VALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTS---RMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+   FDN      K   REI +LR +DH NV+ +  +V      +   +Y+ +  M+ DL  ++ S +   +E   + +++Q+L GL++ H+  VLHRD+K SNLL++ +  LKI DFGLA     +    MT  VVT WYR PELLL ++DY   +D+WS GCI  EL+  KP+ PGR  V QL  + +L G+PSE+
Sbjct:   81 VAVKKIANAFDN--KIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQA-LSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARV--TSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSED 278          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKF3_ORYSJ (Cyclin-dependent kinase F-3 OS=Oryza sativa subsp. japonica GN=CDKF-3 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.070e-34
Identity = 78/197 (39.59%), Postives = 121/197 (61.42%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 592
            +IVA+KK++    + E      RE+  L++L+HPN++KL+ +        L+ +F  ME +L  ++   +  F+E +++ +M Q+L GL + HNNG  HRD+K  NLL+ D G +KIADFGLA   + +   P T  V T WYR PE+LL ++ Y   +D+W+ G ILAEL    P+ PG +E +QL+KI  + G+P
Sbjct:   28 EIVAVKKMKRKFFQWEEC-ISLREVKALQKLNHPNIVKLKEVTMENHE--LFFIFENMECNLYDVIRERQAAFSEEEIRNFMVQILQGLAYMHNNGYFHRDLKPENLLVTD-GTVKIADFGLAR--EVSSSPPYTDYVSTRWYRAPEVLLQSSAYTPAIDMWAVGAILAELFTLSPLFPGGSETDQLYKICAVLGTP 218          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK15_MOUSE (Cell division protein kinase 15 OS=Mus musculus GN=Cdk15 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.070e-34
Identity = 86/203 (42.36%), Postives = 124/203 (61.08%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEV-EQLHKIYKLCGSPSEE 601
            ++VALK +  +    E V F A RE  +L+ L H N++ L  +V ++ +  L  VF YM  DLA  ++          V+ +M QLL GL + H+  VLHRD+K  NLL+   G LK+ADFGLA     P+  +  +S VVTLWYRPP+ LLGAT+Y   +D+W AGCI  E+  G+P+ PG + + EQL KI+++ G P+E+
Sbjct:  125 QLVALKVISMN--AEEGVPFTAIREASLLKGLKHANIVLLHDIVHTKET--LTFVFEYMHTDLAQYMSQHPGGLHPHNVRLFMFQLLRGLAYIHHQRVLHRDLKPQNLLLSHLGELKLADFGLARAKSIPSQTY--SSEVVTLWYRPPDALLGATEYSSELDIWGAGCIFIEMFQGQPLFPGVSNILEQLEKIWEVLGVPTED 321          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.070e-34
Identity = 91/209 (43.54%), Postives = 122/209 (58.37%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDH-PNVIKLEGLVTSRMS---CSLYLVFHYMEHDLAGLVASPEV---KFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV-LKIADFGLASFFD-PNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            KIVALKK R    E        RE+ +LR L   P+V++L  +   +       LYLVF YM+ DL   + S +          VK  M+QL  G+  CH +GVLHRD+K  NLL+D   + LKIAD GLA  +  P  K+  T  ++TLWYR PE+LLGAT Y   VD+WS  CI AEL+  K + PG +E++QL  I++L G+P+EE
Sbjct:   38 KIVALKKTRLHEDEEGVPPTTLREVSLLRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKYIRSFKQTGESIAPMNVKSLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAYTLPIKKY--THEILTLWYRAPEVLLGATHYSPAVDMWSVACIFAELVTQKALFPGDSELQQLLHIFRLLGTPNEE 244          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: Y4007_DICDI (Putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 OS=Dictyostelium discoideum GN=DDB_G0272797 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.397e-34
Identity = 79/202 (39.11%), Postives = 125/202 (61.88%), Query Frame = 2
Query:    5 IVALKKVRF---DNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +VALK+V     ++ EP  VK++ +    L+ L   N++ L        +  L L+  ++E DL  ++++P+   +  Q+K +  QLL G++ CH NG++HRDIK +NLLI  +GVLK+ DFGL++ +    +  ++S VV+L+YRPPELLLG+  YG  +D+WS GCIL E++    +  G  E  QL  I+KL G P+E+
Sbjct:   29 LVALKRVTDIAQEDGEPVEVKYLNQ----LKNLS--NIVNLRDHFYIDKNSVLVLIMEFIEGDLWKIMSNPQCTLSLGQIKNFTKQLLEGVKQCHVNGIMHRDIKPANLLITTNGVLKLTDFGLSTSYSKRSEKFLSSNVVSLYYRPPELLLGSCIYGPEIDMWSVGCILMEMINNSYLFAGADETAQLDLIFKLFGCPTEK 224          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK14_MOUSE6.273e-3540.39Cell division protein kinase 14 OS=Mus musculus GN... [more]
KIN28_YEAST8.193e-3537.56Serine/threonine-protein kinase KIN28 OS=Saccharom... [more]
CKB21_ORYSJ8.193e-3543.54Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CDK15_HUMAN8.193e-3542.36Cell division protein kinase 15 OS=Homo sapiens GN... [more]
CDK14_HUMAN8.193e-3540.39Cell division protein kinase 14 OS=Homo sapiens GN... [more]
MMK1_MEDSA1.070e-3440.89Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
CDKF3_ORYSJ1.070e-3439.59Cyclin-dependent kinase F-3 OS=Oryza sativa subsp.... [more]
CDK15_MOUSE1.070e-3442.36Cell division protein kinase 15 OS=Mus musculus GN... [more]
CDC2D_ANTMA1.070e-3443.54Cell division control protein 2 homolog D OS=Antir... [more]
Y4007_DICDI1.397e-3439.11Putative cyclin-dependent serine/threonine-protein... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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