DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK09_MOUSE (Mitogen-activated protein kinase 9 OS=Mus musculus GN=Mapk9 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.146e-28
Identity = 71/202 (35.15%), Postives = 118/202 (58.42%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+++L+ ++H N+I L  + T + +      +YLV   M+ +L  ++    ++    ++   ++Q+L G++H H+ G++HRD+K SN+++  D  LKI DFGLA     N    MT  VVT +YR PE++LG   Y   VD+WS GCI+AE++  K + PGR  ++Q +K+ +  G+PS E
Sbjct:   52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMAEMVLHKVLFPGRDYIDQWNKVIEQLGTPSAE 247          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SLT2_YEAST (Mitogen-activated protein kinase SLT2/MPK1 OS=Saccharomyces cerevisiae GN=SLT2 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.497e-28
Identity = 78/206 (37.86%), Postives = 113/206 (54.85%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGL----VTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN---HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV     +    K   RE+ +LR    H N+  L  +            LYL    ME D+  ++ S +   T+   + + +Q+L GL++ H+  VLHRD+K  NLL++ D  LKI DFGLA  +  N   +   +T  V T WYR PE++L    Y   +D+WSAGCILAE L GKPI  G+  V QL++I ++ G+P +E
Sbjct:   51 VAIKKVTNVFSKTLLCKRSLRELKLLRHFRGHKNITCLYDMDIVFYPDGSINGLYLYEELMECDMHQIIKSGQ-PLTDAHYQSFTYQILCGLKYIHSADVLHRDLKPGNLLVNADCQLKICDFGLARGYSENPVENSQFLTEYVATRWYRAPEIMLSYQGYTKAIDVWSAGCILAEFLGGKPIFKGKDYVNQLNQILQVLGTPPDE 255          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.497e-28
Identity = 70/202 (34.65%), Postives = 120/202 (59.41%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+++++ ++H N+I L  + TS+ +      +YLV   M+ +L  ++   +++    ++   ++Q+L G++H H+ G++HRD+K SN+++  D  LKI DFGLA          MT  VVT +YR PE++LG   Y   VD+WS GCILAE++  K + PGR  ++Q +K+ +  G+P++E
Sbjct:   52 VAIKKLSRPFQNQTHAKRAYRELVLMKYVNHKNIICLLNVFTSQKTLDEFQDVYLVMELMDANLCQVI---QMELDHERLSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAATGLL--MTPYVVTRYYRAPEVILG-MGYQANVDIWSVGCILAEMVRHKILFPGRDYIDQWNKVIEQLGTPTQE 247          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK8_DROME (Cell division protein kinase 8 OS=Drosophila melanogaster GN=Cdk8 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.497e-28
Identity = 77/201 (38.31%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDL--------AGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV----LKIADFGLASFFDPNHKH--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTE---------VEQLHKIYKLCGSPSEE 601
            REI +LR L H NVI L  +  S     ++L+  Y EHDL        A      +V      VK  ++Q+L G+ + H+N VLHRD+K +N+L+  DG     +KIAD G A  F+   K    +   VVT WYR PELLLGA  Y   +D+W+ GCI AELL  +PI   R E          +QL +I+ + G P ++
Sbjct:   65 REIALLRELKHQNVITLIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDK 265          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SPM1_SCHPO (Mitogen-activated protein kinase spm1 OS=Schizosaccharomyces pombe GN=spm1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.955e-28
Identity = 79/206 (38.35%), Postives = 119/206 (57.77%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESV--KFMAREI-LILRRLDHPNVIKLEGL--VTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPN-HKHP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+   N+  +S+  K   REI L++   +H N+  +  L  +       +Y+    ME DL  ++ S +   T+   + +++Q+L GL++ H+  V+HRD+K  NLL++ D  LKI DFGLA     N  ++P  MT  V T WYR PE++L  + Y  G+D+WS GCILAELL G P+  G+  V QL+ I    G+P EE
Sbjct:   49 VAIKKIT--NVFSKSILTKRALREIKLLIHFRNHRNITCIYDLDIINPYNFNEVYIYEELMEADLNAIIKSGQ-PLTDAHFQSFIYQILCGLKYIHSANVIHRDLKPGNLLVNADCELKICDFGLARGCSENPEENPGFMTEYVATRWYRAPEIMLSFSSYHKGIDVWSVGCILAELLGGTPLFKGKDFVHQLNLILHQLGTPDEE 251          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: PMK1_CAEEL (Mitogen-activated protein kinase pmk-1 OS=Caenorhabditis elegans GN=pmk-1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.955e-28
Identity = 68/182 (37.36%), Postives = 106/182 (58.24%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            RE+ +LR + H N+I L  + T   + +    +Y V   M  DL+ ++     +  +  ++  ++Q+L GL++ H+  ++HRD+K SN+ +++D  LKI DFGLA   D      MT  V T WYR PE++L    Y   VD+WS GCILAEL+ GK + PG   ++QL +I  + G+P EE
Sbjct:   81 RELRLLRCMCHENIIDLLDVFTPNENVNDIEDVYFVSMLMGADLSNILKIQ--RLNDDHIQFLVYQILRGLKYIHSADIIHRDLKPSNIAVNEDCELKILDFGLARQTDSE----MTGYVATRWYRAPEIMLNWMHYTQTVDVWSVGCILAELITGKTLFPGSDHIDQLTRIMSVTGTPDEE 256          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CPK1_CRYNE (Mitogen-activated protein kinase CPK1 OS=Cryptococcus neoformans GN=CPK1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.955e-28
Identity = 75/189 (39.68%), Postives = 109/189 (57.67%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP----------MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            REI +LR   H N+I +  L+   +  +   +YLV   ME DL  ++ S E+  ++   + +++Q L GL+  H+  VLHRD+K SNLL++ +  LKI DFGLA     + K P          MT  V T WYR PE++L   +Y   +DLWS GCILAE++ GKP+ PGR    QL  I ++ G+P+
Sbjct:   61 REIKLLRHFHHENIISILDLIQPESYEVFNEVYLVQELMETDLHRVIRSQEL--SDDHCQYFVYQTLRGLKALHSADVLHRDLKPSNLLLNANCDLKICDFGLAR---SSAKPPPGTSDGGQGFMTEYVATRWYRAPEVMLSFQEYTKAIDLWSVGCILAEMINGKPLFPGRDYHHQLSLILQVLGTPT 244          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKL3_MOUSE (Cyclin-dependent kinase-like 3 OS=Mus musculus GN=Cdkl3 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.955e-28
Identity = 66/197 (33.50%), Postives = 110/197 (55.84%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGS 589
            +IVA+K + ++  E    K   REI  L++  H N++ L  +   R    ++LVF +++H +   +          +++ Y+ Q+L  +E+ HNN ++HRDIK  N+L+   G+ K+ DFG A +   P   +  T  V T WYR PEL+L  T YG  VD+W+ GC++ E+  G P +P  ++++ LHKI    G+
Sbjct:   28 RIVAIK-IFYEKPEKSVNKIATREIKFLKQFRHENLVNL--IEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDVY--TDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGHPFLPSSSDLDLLHKIVLKVGN 219          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SSN3_MAGGR (Serine/threonine-protein kinase SSN3 OS=Magnaporthe grisea GN=SSN3 PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.553e-28
Identity = 78/225 (34.67%), Postives = 117/225 (52.00%), Query Frame = 2
Query:   11 ALKKVRFDNLEPESVKFMA------REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLV----ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT----------------EVEQLHKIYKLCGSPSEE 601
            A+KK + D  E E + +        RE+ +   L HPNVI+L  + T     ++++VF Y EHDL  ++      P+       +K  M QLL+G ++ H N VLHRD+K +N+++   G +K+ D GLA  F    +  M     VVT+WYR PELL+G+  Y   VD+W+ GCI AELL+ +PI  G                  +  Q+ KI  + G P++E
Sbjct:   89 AIKKFKPDK-EGEQITYTGISQSAIREMALCSELRHPNVIRL--VETILEDKAIFMVFEYAEHDLLQIIHHHTQQPKHPIPPQTIKSIMFQLLNGCQYLHTNWVLHRDLKPANIMVTSSGEVKVGDLGLARIFWKPVRTLMQGDKVVVTIWYRAPELLMGSHHYTPAVDMWAVGCIFAELLSLRPIFKGEEAKMDNTKKGGSRDMPFQRHQMQKIVDIMGMPTKE 310          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SSN3_CRYNE (Serine/threonine-protein kinase SSN3 OS=Cryptococcus neoformans GN=SSN3 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.553e-28
Identity = 69/171 (40.35%), Postives = 99/171 (57.89%), Query Frame = 2
Query:   65 AREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLV----ASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--------VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPG 541
            AREI++ R L H N++ L  ++    S  +Y+VF Y EHD   ++     +         ++  +HQLL G+   H+N VLHRD+K +N+L+   GV+KI D GLA  +   HK P+  +        VVT+WYR PEL+LGA  Y   VD+W+ GCI AELL+ +PI  G
Sbjct:  135 AREIMLNRELHHRNLVSLREVILEDKS--IYMVFEYAEHDFLQIIHYHSQTARASIPPSTLRRLLHQLLCGVHFLHSNFVLHRDLKPANILVTSQGVVKIGDLGLARLW---HK-PLAQQGLYGGDKVVVTIWYRAPELILGAKHYTAAVDIWAVGCIYAELLSLRPIFKG 299          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK09_MOUSE1.146e-2835.15Mitogen-activated protein kinase 9 OS=Mus musculus... [more]
SLT2_YEAST1.497e-2837.86Mitogen-activated protein kinase SLT2/MPK1 OS=Sacc... [more]
MK08A_CYPCA1.497e-2834.65Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]
CDK8_DROME1.497e-2838.31Cell division protein kinase 8 OS=Drosophila melan... [more]
SPM1_SCHPO1.955e-2838.35Mitogen-activated protein kinase spm1 OS=Schizosac... [more]
PMK1_CAEEL1.955e-2837.36Mitogen-activated protein kinase pmk-1 OS=Caenorha... [more]
CPK1_CRYNE1.955e-2839.68Mitogen-activated protein kinase CPK1 OS=Cryptococ... [more]
CDKL3_MOUSE1.955e-2833.50Cyclin-dependent kinase-like 3 OS=Mus musculus GN=... [more]
SSN3_MAGGR2.553e-2834.67Serine/threonine-protein kinase SSN3 OS=Magnaporth... [more]
SSN3_CRYNE2.553e-2840.35Serine/threonine-protein kinase SSN3 OS=Cryptococc... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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