DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK8_ARATH (Mitogen-activated protein kinase 8 OS=Arabidopsis thaliana GN=MPK8 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.553e-28
Identity = 77/204 (37.75%), Postives = 112/204 (54.90%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+            + REI +LR L HP+V++++ ++   + R    +Y+VF  ME DL  ++ + +   T    + +++QLL GL++ H   V HRD+K  N+L + D  LKI DFGLA  SF D       T  V T WYR PEL     + Y   +D+WS GCI AE+L GKP+ PG+  V QL  +    G+P  E
Sbjct:  130 VAIKKINDVFEHVSDATRILREIKLLRLLRHPDVVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYVHAANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSVGCIFAEMLLGKPLFPGKNVVHQLDLMTDFLGTPPPE 332          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKL3_RAT (Cyclin-dependent kinase-like 3 OS=Rattus norvegicus GN=Cdkl3 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.553e-28
Identity = 66/197 (33.50%), Postives = 110/197 (55.84%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGS 589
            +IVA+K + ++  E    K   REI  L++  H N++ L  +   R    ++LVF +++H +   +          +++ Y+ Q+L  +E+ HNN ++HRDIK  N+L+   G+ K+ DFG A +   P   +  T  V T WYR PEL+L  T YG  VD+W+ GC++ E+  G P +P  ++++ LHKI    G+
Sbjct:   28 RIVAIK-IFYEKPEKSVNKIATREIKFLKQFRHENLVNL--IEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDVY--TDYVATRWYRAPELVLKDTTYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGN 219          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MKC1_CANAL (Mitogen-activated protein kinase MKC1 OS=Candida albicans GN=MKC1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.334e-28
Identity = 79/209 (37.80%), Postives = 119/209 (56.94%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESV--KFMAREILILRRL-DHPNVIKLEGL------VTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP---MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            VA+KK+   N+  +++  K   RE+ +L+    H N+  L  L      +T   +  +YL    ME D+  ++ S +   ++   + +++Q+L GL   H+  VLHRD+K  NLL++ D  LKI DFGLA  F  N       MT  V T WYR PE++L  T+Y   +D+WS GCILAELL GKP+  G+  V+QL++I  + G+P E
Sbjct:   71 VAIKKIT--NIFSKNILCKRALRELKLLQFFRGHKNITCLYDLDIIPNPMTGEFN-EIYLYEELMECDMHQIIRSGQ-PLSDQHYQSFIYQVLCGLNFIHSADVLHRDLKPGNLLVNADCELKICDFGLARGFSENPDENAGFMTEYVATRWYRAPEIMLSFTNYTKAIDIWSVGCILAELLGGKPLFRGKDYVDQLNQILMILGTPPE 275          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.334e-28
Identity = 74/205 (36.10%), Postives = 112/205 (54.63%), Query Frame = 2
Query:   11 ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEV------KFTEP--QVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598
            A+KKV      P   ++ +RE+ ILR  DHPN++KL+   T  +S     V+ ++  +        E+      K   P   ++ Y +Q+  G+ + H  GV HRDIK SN+L+D + GVLKI DFG A   +  H  P  S + + +YR PEL++G T Y   +D+W  GC++ E+L GK I  G+  + QL +I KL G P +
Sbjct:   66 AIKKV------PAHTEYKSRELQILRIADHPNIVKLQYFFT-HLSPQDNKVYQHLAMECLPETLQIEINRYVTNKLEMPLKHIRLYTYQIARGMLYLHGLGVCHRDIKPSNVLVDPETGVLKICDFGSAKKLE--HNQPSISYICSRFYRAPELIIGCTQYTTQIDIWGLGCVMGEMLIGKAIFQGQEPLLQLREIAKLLGPPDK 261          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MDS1_YEAST (Serine/threonine-protein kinase MDS1/RIM11 OS=Saccharomyces cerevisiae GN=MDS1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.354e-28
Identity = 77/206 (37.38%), Postives = 114/206 (55.34%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS---LYLVFHYMEHDLAGLV---ASPEVKFTEPQVKCYMHQLLSGLEHCHN-NGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       +F  RE+ I++ L H N+I L+     R S     L L+  YM   L   +          +  ++K YM QL   L + H+   V HRDIK  NLL+D +   LK+ DFG A    P    P  S + + +YR PEL+ GAT+Y   +D+WS+GC++AELL G+P+ PG + ++QL +I K+ G+PS++
Sbjct:   65 VAIKKVLQDK------RFKNRELEIMKMLSHINIIDLKYFFYERDSQDEIYLNLILEYMPQSLYQRLRHFVHQRTPMSRLEIKYYMFQLFKSLNYLHHFANVCHRDIKPQNLLVDPETWSLKLCDFGSAKQLKPTE--PNVSYICSRYYRAPELIFGATNYTNQIDIWSSGCVMAELLLGQPMFPGESGIDQLVEIIKILGTPSKQ 262          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: ERK1_CANAL (Extracellular signal-regulated kinase 1 OS=Candida albicans GN=ERK1 PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.354e-28
Identity = 70/204 (34.31%), Postives = 114/204 (55.88%), Query Frame = 2
Query:   17 KKVRFDNLEPESVKFMA----REILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            +KV    +EP     +     RE+ +L+  +H N+I +  +   +       +YL+   ME DL  ++ +  +  ++  ++ +++Q L  L+  H+  VLHRD+K SNLL++ +  LKI DFGLA        +   MT  V T WYR PE++L   +Y   +D+WS GCILAE+L+G+P+ PGR    QL  I ++ G+P+ E
Sbjct:   92 QKVAIKKIEPFERSMLCLRTLRELKLLKHFNHENIISILAIQRPINYESFNEIYLIQELMETDLHRVIRTQNL--SDDHIQYFIYQTLRALKAMHSANVLHRDLKPSNLLLNSNCDLKICDFGLARSIASQEDNYGFMTEYVATRWYRAPEIMLTFQEYTTAIDVWSVGCILAEMLSGRPLFPGRDYHNQLWLIMEVLGTPNME 293          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SPK1_SCHPO (Mitogen-activated protein kinase spk1 OS=Schizosaccharomyces pombe GN=spk1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.687e-28
Identity = 74/201 (36.82%), Postives = 113/201 (56.22%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSL---YLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            VA+KK+   N  P       REI +LR   H N+I +  ++       L   Y+V   ME DL  ++ S  +  ++   + + +Q+L  L+  H+ GV+HRD+K SNLL++ +  LK+ADFGLA        +P  MT  V T WYR PE++L   +Y   +DLWS GCILAE+L+ +P+ PG+    Q+  I  + G+P+
Sbjct:   65 VAVKKIHPFN-HPVFCLRTLREIKLLRHFRHENIISILDILPPPSYQELEDVYIVQELMETDLYRVIRSQPL--SDDHCQYFTYQILRALKAMHSAGVVHRDLKPSNLLLNANCDLKVADFGLARSTTAQGGNPGFMTEYVATRWYRAPEIMLSFREYSKAIDLWSTGCILAEMLSARPLFPGKDYHSQITLILNILGTPT 262          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK19_ARATH (Mitogen-activated protein kinase 19 OS=Arabidopsis thaliana GN=MPK19 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.687e-28
Identity = 73/204 (35.78%), Postives = 113/204 (55.39%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLG-ATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+            + RE+ +LR L HP++++++ ++   + R    +Y+VF  ME DL  ++ + +   T    + +++Q+L  L++ H   V HRD+K  N+L + +  LK+ DFGLA  SF D       T  V T WYR PEL     + Y   +D+WS GCI AE+L GKP+ PG++ V QL  I  L G+P  E
Sbjct:   51 VAIKKINDVFEHVSDALRILREVKLLRLLRHPDIVEIKSIMLPPSKREFKDIYVVFELMESDLHQVIKAND-DLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVSFNDTPTTVFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPKSE 253          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK15_ARATH (Mitogen-activated protein kinase 15 OS=Arabidopsis thaliana GN=MPK15 PE=2 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 5.687e-28
Identity = 79/206 (38.35%), Postives = 117/206 (56.80%), Query Frame = 2
Query:    8 VALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+   FD++   +   + REI +LR L HP+V++++ ++   + R    +Y+VF  ME DL  ++ + +   T    + +++QLL GL++ H   V HRD+K  N+L + D  LKI DFGLA  SF D       T  V T WYR PEL     + Y   +D+WS GCI AE+L GKP+ PG+  V QL  +    G+P  E
Sbjct:  116 VAIKKINDVFDHISDATR--ILREIKLLRLLLHPDVVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRGLKYVHAANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSVGCIFAEMLLGKPLFPGKNVVHQLDIMTDFLGTPPPE 318          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SSN3_YEAST (Meiotic mRNA stability protein kinase SSN3 OS=Saccharomyces cerevisiae GN=SSN3 PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 7.427e-28
Identity = 74/195 (37.95%), Postives = 109/195 (55.90%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLV---ASPEVKFTEPQ-VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT-----------EVEQLHKIYKLCGSPSEE 601
            RE+ + R L + ++  L  +   R    +++V+ Y EHDL  ++   + PE +   P+ V+  M QLL G+ + H N VLHRD+K +N+++  DG +KI D GLA  F    +   T    VVT+WYR PELLLGA  Y   VDLWS GCI AEL+  +PI  G             +V QL +I ++ G+P ++
Sbjct:  206 REMALCRELHNKHLTTLVEIFLERKC--VHMVYEYAEHDLLQIIHFHSHPEKRMIPPRMVRSIMWQLLDGVSYLHQNWVLHRDLKPANIMVTIDGCVKIGDLGLARKFHNMLQTLYTGDKVVVTIWYRAPELLLGARHYTPAVDLWSVGCIFAELIGLQPIFKGEEAKLDSKKTVPFQVNQLQRILEVLGTPDQK 398          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MPK8_ARATH2.553e-2837.75Mitogen-activated protein kinase 8 OS=Arabidopsis ... [more]
CDKL3_RAT2.553e-2833.50Cyclin-dependent kinase-like 3 OS=Rattus norvegicu... [more]
MKC1_CANAL3.334e-2837.80Mitogen-activated protein kinase MKC1 OS=Candida a... [more]
MCK1_YEAST3.334e-2836.10Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
MDS1_YEAST4.354e-2837.38Serine/threonine-protein kinase MDS1/RIM11 OS=Sacc... [more]
ERK1_CANAL4.354e-2834.31Extracellular signal-regulated kinase 1 OS=Candida... [more]
SPK1_SCHPO5.687e-2836.82Mitogen-activated protein kinase spk1 OS=Schizosac... [more]
MPK19_ARATH5.687e-2835.78Mitogen-activated protein kinase 19 OS=Arabidopsis... [more]
MPK15_ARATH5.687e-2838.35Mitogen-activated protein kinase 15 OS=Arabidopsis... [more]
SSN3_YEAST7.427e-2837.95Meiotic mRNA stability protein kinase SSN3 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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