DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKL3_HUMAN (Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=CDKL3 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.161e-27
Identity = 65/199 (32.66%), Postives = 111/199 (55.78%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA-SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            +IVA+K + ++  E    K   REI  L++  H N++ L  +   R    ++LVF +++H +   +          +++ Y+ Q+L  +++ H+N ++HRDIK  N+L+   G+ K+ DFG A +   P   +  T  V T WYR PEL+L  T YG  VD+W+ GC++ E+  G P +P  ++++ LHKI    G+ S
Sbjct:   28 QIVAIK-IFYERPEQSVNKIAMREIKFLKQFHHENLVNL--IEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDIY--TDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLS 221          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SSN3_PHANO (Serine/threonine-protein kinase SSN3 OS=Phaeosphaeria nodorum GN=SSN3 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 73/203 (35.96%), Postives = 107/203 (52.71%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQ--------VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR------VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT-----------EVEQLHKIYKLCGSPSEE 601
            RE+ +   L HPNV+    ++       +++VF Y EHDL  ++        +PQ        +K  ++QLL GL + H N V+HRD+K +N+++   G +KI D GLA  F      P+ S       VVT+WYR PELLLG+  Y   VDLW+ GCI AELL+ +PI  G             +  Q+ KI ++ G PS++
Sbjct:  105 REMALCTELAHPNVVHTVEIILEEKC--IFIVFEYAEHDLLQIIHH----HNQPQRQAIPARTIKSILYQLLQGLVYLHRNWVMHRDLKPANIMVTSAGKVKIGDLGLARLF----YKPLQSLFSGDKVVVTIWYRAPELLLGSRHYTPAVDLWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMQKIVEIMGMPSKD 297          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: SSN3_ASHGO (Serine/threonine-protein kinase SSN3 OS=Ashbya gossypii GN=SSN3 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 71/193 (36.79%), Postives = 109/193 (56.48%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLV---ASPEVKFTEPQV-KCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSR--VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRT-----------EVEQLHKIYKLCGSPS 595
            RE+ + R LD+ ++ KL  +   R S  +Y+V  + EHDL  ++   + PE +   P++ K  M Q+L G+ + H N +LHRD+K +N+++  DG +KI D GLA  F    +   T    VVT+WYR PELLLGA  Y   +DLW+ GCI +EL+  +PI  G             +  QL +I ++ G+P+
Sbjct:  218 REMSLCRELDNKHLTKLVEIFLERKS--IYMVSEFAEHDLLQIIHFHSHPEKRLIAPRMLKSIMWQILDGVSYLHQNWILHRDLKPANIMVTVDGCVKIGDLGLARKFYNLVQTLYTGDKVVVTIWYRAPELLLGARHYSPAIDLWAVGCIFSELIGLRPIFKGEEAKMDSKKSVPFQGNQLQRILEVLGTPT 408          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 77/207 (37.20%), Postives = 114/207 (55.07%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQ----VKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+  +R LDHPNV+ L+      T +    L LV  Y+   +  ++     K  +      VK Y +Q+   L + H+  GV HRDIK  NLL++     +K+ DFG A         P  S + + +YR PEL+ GAT+Y   +D+WSAGC+LAELL G+P+ PG + V+QL +I K+ G+P+ E
Sbjct:   99 VAIKKVLQDK------RYKNRELQTMRLLDHPNVVCLKHCFFSTTEKDEVYLNLVLEYVPETVHRVIKHYN-KLNQRMPLILVKLYTYQIFRALSYIHHTIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 296          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK8_ORYSJ (Mitogen-activated protein kinase 8 OS=Oryza sativa subsp. japonica GN=MPK8 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 75/204 (36.76%), Postives = 118/204 (57.84%), Query Frame = 2
Query:    8 VALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            VA+KK+   F++L   +   + REI +LR L HP++++++ ++   + R    +Y+VF  M+ DL  ++ + +   T+   + +++Q+L  L++ H   V HRD+K  N+L + +  LKI DFGLA  +F D       T  V T WYR PEL     T Y   +D+WS GCI AE+L GKP+ PG+  V QL  +  L G+PS
Sbjct:   39 VAIKKIHNIFEHLSDAAR--ILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIKAND-DLTKEHHQFFLYQMLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFFTKYSPAIDIWSIGCIFAEILTGKPLFPGKNVVHQLDLMTDLLGTPS 239          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK10_HUMAN (Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 67/202 (33.17%), Postives = 116/202 (57.43%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+++++ ++H N+I L  + T + +      +YLV   M+ +L  ++   +++    ++   ++Q+L G++H H+ G++HRD+K SN+++  D  LKI DFGLA          MT  VVT +YR PE++LG   Y   VD+WS GCI+ E++  K + PGR  ++Q +K+ +  G+P  E
Sbjct:   90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK09_RAT (Mitogen-activated protein kinase 9 OS=Rattus norvegicus GN=Mapk9 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 70/202 (34.65%), Postives = 115/202 (56.93%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+++L+ ++H N+I L  + T + +      +YLV   M+ +L  ++    ++    ++   ++Q+L G++H H+ G++HRD+K SN+++  D  LKI DFGLA     N    MT  VVT +YR PE++LG   Y   VD+WS GCI+ EL+ G  I  G   ++Q +K+ +  G+PS E
Sbjct:   52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAE 247          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK09_HUMAN (Mitogen-activated protein kinase 9 OS=Homo sapiens GN=MAPK9 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 70/202 (34.65%), Postives = 115/202 (56.93%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+++L+ ++H N+I L  + T + +      +YLV   M+ +L  ++    ++    ++   ++Q+L G++H H+ G++HRD+K SN+++  D  LKI DFGLA     N    MT  VVT +YR PE++LG   Y   VD+WS GCI+ EL+ G  I  G   ++Q +K+ +  G+PS E
Sbjct:   52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAE 247          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK08_RAT (Mitogen-activated protein kinase 8 OS=Rattus norvegicus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 68/202 (33.66%), Postives = 116/202 (57.43%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+++++ ++H N+I L  + T + S      +Y+V   M+ +L  ++   +++    ++   ++Q+L G++H H+ G++HRD+K SN+++  D  LKI DFGLA          MT  VVT +YR PE++LG   Y   VDLWS GCI+ E++  K + PGR  ++Q +K+ +  G+P  E
Sbjct:   52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCLKILFPGRDYIDQWNKVIEQLGTPCPE 247          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLVA---SPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+  +R LDHPNV+ L+      T +    L LV  Y+   +  ++        +     VK Y +Q+   L + H   GV HRDIK  NLL++     +K+ DFG A         P  S + + +YR PEL+ GAT+Y   +D+WSAGC+LAELL G+P+ PG + V+QL +I K+ G+P+ E
Sbjct:   99 VAIKKVLQDR------RYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLVYVKLYTYQIFRSLSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 296          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKL3_HUMAN2.161e-2732.66Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=... [more]
SSN3_PHANO2.822e-2735.96Serine/threonine-protein kinase SSN3 OS=Phaeosphae... [more]
SSN3_ASHGO2.822e-2736.79Serine/threonine-protein kinase SSN3 OS=Ashbya gos... [more]
MSK1_TOBAC2.822e-2737.20Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
MPK8_ORYSJ2.822e-2736.76Mitogen-activated protein kinase 8 OS=Oryza sativa... [more]
MK10_HUMAN2.822e-2733.17Mitogen-activated protein kinase 10 OS=Homo sapien... [more]
MK09_RAT2.822e-2734.65Mitogen-activated protein kinase 9 OS=Rattus norve... [more]
MK09_HUMAN2.822e-2734.65Mitogen-activated protein kinase 9 OS=Homo sapiens... [more]
MK08_RAT2.822e-2733.66Mitogen-activated protein kinase 8 OS=Rattus norve... [more]
KSG3_ARATH2.822e-2736.89Shaggy-related protein kinase gamma OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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