DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_WALSE (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia sebi GN=HOG1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 69/173 (39.88%), Postives = 103/173 (59.54%), Query Frame = 2
Query:   83 LRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            ++ L H N+I L  +  S     +Y +   +  DL  L++S  ++     V+ +++Q+L  L+  H  GV+HRD+K SN+LI+++  LKI DFGLA   DP     MT  V T +YR PE++L   +Y   VD+WS GCI AE++ G+PI PG+  V QL  I +L GSP E+
Sbjct:    6 IKHLRHENIISLLDVFISPGE-DIYFITELLGTDLHRLLSSRPLE--RQFVQYFLYQMLRALKFVHPAGVVHRDLKPSNILINENCDLKICDFGLARLQDPQ----MTGYVSTRYYRAPEIMLTWQEYDSAVDIWSVGCIFAEMIDGRPIFPGKDHVHQLTVITELLGSPPED 171          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK18_ARATH (Mitogen-activated protein kinase 18 OS=Arabidopsis thaliana GN=MPK18 PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 3.686e-27
Identity = 73/206 (35.44%), Postives = 120/206 (58.25%), Query Frame = 2
Query:    8 VALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+   F+++  ++++ + RE+ +LR L HP++++++ ++   + R    +Y+VF  ME DL  ++ + +   T    + +++Q+L  L+  H   V HRD+K  N+L + +  LK+ DFGLA  +F D       T  V T WYR PEL     + Y   +D+WS GCI AE+L GKP+ PG++ V QL  I  L G+P  E
Sbjct:   39 VAIKKINDVFEHIS-DALRIL-REVKLLRLLRHPDIVEIKSIMLPPSKREFKDIYVVFELMESDLHQVIKAND-DLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFFSKYTPAIDVWSIGCIFAEVLTGKPLFPGKSVVHQLELITDLLGTPKSE 241          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK11_ORYSJ (Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 3.686e-27
Identity = 75/202 (37.13%), Postives = 113/202 (55.94%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVT--SRMSC-SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            VA+KK+            + REI +LR L HP++++++ ++   S+M    +Y+VF  ME DL  ++ + +   T    + +++Q+L  L++ H   V HRD+K  N+L + +  LKI DFGLA  +F D       T  V T WYR PEL     + Y   +D+WS GCI AE+L GKP+ PG+  V QL  I  L G+PS
Sbjct:   52 VAIKKIHNIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSKMDFRDIYVVFELMESDLHQVIKAND-DLTREHYQFFLYQMLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFTDAPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLITDLLGTPS 252          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK10_RAT (Mitogen-activated protein kinase 10 OS=Rattus norvegicus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 3.686e-27
Identity = 67/202 (33.17%), Postives = 116/202 (57.43%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KK+          K   RE+++++ ++H N+I L  + T + +      +YLV   M+ +L  ++   +++    ++   ++Q+LS ++H H+ G++HRD+K SN+++  D  LKI DFGLA          MT  VVT +YR PE++LG   Y   VD+WS GCI+ E++  K + PGR  ++Q +K+ +  G+P  E
Sbjct:   90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLSAIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 3.686e-27
Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLVA---SPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+  +R LDHPNV+ L+      T +    L LV  Y+   +  ++        +     VK Y +Q+   L + H   GV HRDIK  NLL++     +K+ DFG A         P  S + + +YR PEL+ GAT+Y   +D+WSAGC+LAELL G+P+ PG + V+QL +I K+ G+P+ E
Sbjct:   95 VAIKKVLQDR------RYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 292          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: HOG1_WALMU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia muriae GN=HOG1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.686e-27
Identity = 69/173 (39.88%), Postives = 103/173 (59.54%), Query Frame = 2
Query:   83 LRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            ++ L H N+I L  +  S     +Y +   +  DL  L++S  ++     V+ +++Q+L  L+  H  GV+HRD+K SN+LI+++  LKI DFGLA   DP     MT  V T +YR PE++L   +Y   VD+WS GCI AE++ G+PI PG+  V QL  I +L GSP E+
Sbjct:    6 IKHLRHENIISLLDVFISPGE-DIYFITELLGTDLHRLLSSRPLE--RQFVQYFLYQMLRALKFVHPAGVVHRDLKPSNILINENCDLKICDFGLARLQDPQ----MTGYVSTRYYRAPEIMLTWQEYDSAVDIWSIGCIFAEMIDGRPIFPGKDHVHQLTVITELLGSPPED 171          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK20_ARATH (Mitogen-activated protein kinase 20 OS=Arabidopsis thaliana GN=MPK20 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.814e-27
Identity = 74/202 (36.63%), Postives = 112/202 (55.45%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            VA+KK+            + REI +LR L HP++++++ ++   + R    +Y+VF  ME DL  ++ + +   T    + +++QLL  L++ H   V HRD+K  N+L + +  LKI DFGLA  +F D       T  V T WYR PEL     + Y   +D+WS GCI AE+L GKP+ PG+  V QL  +  L G+PS
Sbjct:   51 VAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPS 251          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: KSS1_YEAST (Mitogen-activated protein kinase KSS1 OS=Saccharomyces cerevisiae GN=KSS1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.814e-27
Identity = 77/212 (36.32%), Postives = 118/212 (55.66%), Query Frame = 2
Query:   20 KVRFDNLEPESVKFMA----REILILRRL-DHPNVI----KLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFT---EPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP------MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            KV    ++P S K       REI +LR   +H N+I    K+  +   +++ ++YLV   ME DL  ++ +    F+   +  V+ + +Q+L  L+  H+  V+HRDIK SNLL++ +  LK+ DFGLA     +          MT  V T WYR PE++L   +Y   +D+WS GCILAE+++GKP+ PGR    QL  I ++ G+PS E
Sbjct:   38 KVAIKKIQPFSKKLFVTRTIREIKLLRYFHEHENIISILDKVRPVSIDKLN-AVYLVEELMETDLQKVINNQNSGFSTLSDDHVQYFTYQILRALKSIHSAQVIHRDIKPSNLLLNSNCDLKVCDFGLARCLASSSDSRETLVGFMTEYVATRWYRAPEIMLTFQEYTTAMDIWSCGCILAEMVSGKPLFPGRDYHHQLWLILEVLGTPSFE 248          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.814e-27
Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGL---VASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+  +R LDHPNV+ L+      T +    L LV  Y+   +  +    +    +     VK Y +Q+   L + H   GV HRDIK  NLL++     +K+ DFG A         P  S + + +YR PEL+ GAT+Y   +D+WSAGC+LAELL G+P+ PG + V+QL +I K+ G+P+ E
Sbjct:  100 VAIKKVLQDK------RYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVYRVSKHYSRANQRMPIIYVKLYTYQICRALAYIHGGVGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTTTIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 297          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.814e-27
Identity = 76/208 (36.54%), Postives = 115/208 (55.29%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS---LYLVFHYMEHDLAGLVAS-PEVKFTEP--QVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            ++VA+KKV  D       ++  RE+ I++ LDHPN + L+    SR       L LV  ++   +  +  S        P   VK Y +Q+   L + HN+ G+ HRDIK  NLL++     LKI DFG A         P  S + + +YR PEL+ GA++Y   +D+WS GC++AELL G+P+ PG + V+QL +I K+ G+P+ E
Sbjct:  107 EVVAIKKVLQDK------RYKNRELQIMQMLDHPNAVALKHSFFSRTDNEEVYLNLVLEFVPETVNRVARSYSRTNQLMPLIYVKLYTYQICRALAYIHNSFGLCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGE--PNVSYICSRYYRAPELIFGASEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 306          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HOG1_WALSE2.822e-2739.88Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
MPK18_ARATH3.686e-2735.44Mitogen-activated protein kinase 18 OS=Arabidopsis... [more]
MPK11_ORYSJ3.686e-2737.13Mitogen-activated protein kinase 11 OS=Oryza sativ... [more]
MK10_RAT3.686e-2733.17Mitogen-activated protein kinase 10 OS=Rattus norv... [more]
KSG1_ARATH3.686e-2736.89Shaggy-related protein kinase alpha OS=Arabidopsis... [more]
HOG1_WALMU3.686e-2739.88Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
MPK20_ARATH4.814e-2736.63Mitogen-activated protein kinase 20 OS=Arabidopsis... [more]
KSS1_YEAST4.814e-2736.32Mitogen-activated protein kinase KSS1 OS=Saccharom... [more]
KSG5_ARATH4.814e-2736.89Shaggy-related protein kinase epsilon OS=Arabidops... [more]
KSG10_ARATH4.814e-2736.54Shaggy-related protein kinase kappa OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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