DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.288e-27
Identity = 76/206 (36.89%), Postives = 113/206 (54.85%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLV---ASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+  +R LDHPNV+ L+      T +    L LV  ++   +  ++   +    +     VK Y +Q+   L + HN  GV HRDIK  NLL++     LK+ DFG A         P  S + + +YR PEL+ GAT+Y   +D+WSAGC+L ELL G+P+ PG + V+QL +I K+ G+P+ E
Sbjct:  100 VAIKKVLQDK------RYKNRELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLVLEFVPETVHRVIRHYSKMNQRMPLIYVKLYSYQICRSLAYIHNCVGVSHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTSAIDIWSAGCVLGELLLGQPLFPGASGVDQLVEIIKVLGTPTRE 297          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK17_ARATH (Mitogen-activated protein kinase 17 OS=Arabidopsis thaliana GN=MPK17 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.288e-27
Identity = 75/204 (36.76%), Postives = 119/204 (58.33%), Query Frame = 2
Query:    8 VALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTS---RMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            VA+KK+   F+++  ++++ + REI +LR L HP++++++ ++     +    +Y+VF  ME DL  ++   +   T    + +++QLL GL+  H+  V HRD+K  N+L + D  +KI D GLA  SF D       T  V T WYR PEL     ++Y   +D+WS GCI AE+L GKP+ PG+  V QL  +  L G+PS
Sbjct:   42 VAIKKMTNVFEHVS-DAIRIL-REIKLLRLLRHPDIVEIKHIMLPPCRKEFKDIYVVFELMESDLHHVLKVND-DLTPQHHQFFLYQLLRGLKFMHSAHVFHRDLKPKNILANADCKIKICDLGLARVSFTDSPSAVFWTDYVATRWYRAPELCGSFYSNYTPAIDMWSVGCIFAEMLTGKPLFPGKNVVHQLELVTDLLGTPS 242          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 6.288e-27
Identity = 76/207 (36.71%), Postives = 112/207 (54.11%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQ----VKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+ I+R  DHPNV++L       T +    L LV  Y+   +    +    K  +      V+ Y +Q+   L + H   GV HRDIK  NLL++     LKI DFG A    P    P  S + + +YR PEL+ GAT+Y   +D+WS GC++AELL G+P+ PG + ++QL +I K+ G+P+ E
Sbjct:  164 VAIKKVLQDK------RYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYLNLVLEYVPETVYR-ASKHYTKMNQHMPIIFVQLYTYQICRALNYLHRVVGVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLVPGE--PNISYICSRYYRAPELIFGATEYTNAIDMWSGGCVMAELLLGQPLFPGESGIDQLVEIIKILGTPTRE 361          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.212e-27
Identity = 75/206 (36.41%), Postives = 111/206 (53.88%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGL---VTSRMSCSLYLVFHYMEHDLAGLV---ASPEVKFTEPQVKCYMHQLLSGLEHCHNN-GVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA+KKV  D       ++  RE+  +R LDHPNV+ L+      T +    L LV  Y+   +  ++   +    +     VK Y +Q+   L + H   GV HRDIK  NLL++     +K+ DFG A         P  S + + +YR PEL+ GAT+Y   +D+WS GC+LAELL G+P+ PG   V+QL +I K+ G+P+ E
Sbjct:  101 VAIKKVLQDK------RYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELLLGQPLFPGERGVDQLVEIIKVLGTPTRE 298          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: KKQ1_YEAST (Probable serine/threonine-protein kinase YKL161C OS=Saccharomyces cerevisiae GN=YKL161C PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.212e-27
Identity = 72/206 (34.95%), Postives = 115/206 (55.83%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEG----LVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHP---MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            VA++K+        S K   RE+ +LR L  HPN++ L         +     +YL    ME DL+ ++ S E +  +   + +++Q+L  L++ H+  VLH D+K  NLL++ D  LKI +FGL+  +  NHK     +   + ++WY+ PE+LL   +    VD+WS GCILAELL  KP+  G+  V+ L+ I ++ G+P EE
Sbjct:   51 VAIRKIPNAFGNKLSCKRTLRELKLLRHLRGHPNIVWLFDTDIVFYPNGALNGVYLYEELMECDLSQIIRS-EQRLEDAHFQSFIYQILCALKYIHSANVLHCDLKPKNLLVNSDCQLKICNFGLSCSYSENHKVNDGFIKGYITSIWYKAPEILLNYQECTKAVDIWSTGCILAELLGRKPMFEGKDYVDHLNHILQILGTPPEE 255          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: JNK1_ANCCA (Stress-activated protein kinase JNK-1 OS=Ancylostoma caninum GN=JNK-1 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 8.212e-27
Identity = 68/204 (33.33%), Postives = 112/204 (54.90%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            K VA+KK+          K   RE +++  ++H N+I L    + +        LY+V   M+ +L  ++   ++     ++   ++Q+L G++H H+ G++HRD+K SN+++  D  LKI DFGLA          MT  VVT +YR PE++LG   YG  VD+WS GCI  EL+ G+ + PG   ++Q  +I +L G+P  +
Sbjct:   50 KPVAIKKLSRPFQNVTHAKRAYREFILMNLVNHKNIIGLLNAFSPQREVEEFNDLYIVMELMDANLCQVI---QMDLDHERLSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAVEAFMMTPYVVTRYYRAPEVILG-MGYGENVDVWSVGCIFGELIRGRVLFPGADHIDQWTRIIELLGTPEPQ 247          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: GSK3_DICDI (Glycogen synthase kinase-3 OS=Dictyostelium discoideum GN=gskA PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.073e-26
Identity = 72/207 (34.78%), Postives = 116/207 (56.04%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYL--VFHYMEHDLAGLVASPEVKFTEPQ----VKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            ++VA+KKV  D       ++  RE+ I++ L+H N++ L+    +  +  +YL  V  Y+  D    V+       +P     VK Y++QL   + + H+ G+ HRDIK  NLL+D     LK+ DFG A        +   S + +  YR PEL+ G+T+Y   +D+WS GC+LAELL G+P+ PG   ++QL +I K+ G+P++E
Sbjct:   80 EVVAIKKVLQDQ------RYKNRELQIMKMLNHINIVSLKNSFYTSDNDEVYLNLVLEYVP-DTVYRVSRHYSMSKQPVPNIFVKLYIYQLCRSINYIHSLGICHRDIKPQNLLLDTSTSTLKLCDFGSAKILIKGETN--VSYICSRHYRAPELIFGSTNYTTTIDVWSLGCVLAELLLGQPLFPGENGIDQLVEIIKVLGTPTKE 277          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: PIT1_SCHPO (Sporulation protein kinase pit1 OS=Schizosaccharomyces pombe GN=pit1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.401e-26
Identity = 74/207 (35.75%), Postives = 118/207 (57.00%), Query Frame = 2
Query:    2 KIVALKKVRFDNLEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVK-FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGV-----LKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            ++VA+K ++   L   S     RE+  L RL ++ N++ +  L   +  C L++V  +++ +L  L+++ +    T  QV+  M Q+  GL H H NG  HRD+K  N+LI  +       +KIADFGLA   + N + P T  V T WYR PELLL  + Y   VD+++AGC+  E+   +PI PG  + +QL+K+ ++ GSP E+
Sbjct:   61 EVVAIKSMK-KKLAKVSDATRLREVHSLLRLSENENIVNIFDLYIDQFRC-LHIVMEFLDCNLYQLISTRKNDPLTLEQVQDIMRQIFKGLNHIHTNGFFHRDMKPENILISSNSDSSSFNVKIADFGLAR--EINSRPPYTEYVSTRWYRAPELLLRDSYYSFPVDIYAAGCMAFEIATLQPIFPGNDDFDQLYKMCEILGSPDEQ 263          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MPK7_ORYSJ (Mitogen-activated protein kinase 7 OS=Oryza sativa subsp. japonica GN=MPK7 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.829e-26
Identity = 74/204 (36.27%), Postives = 117/204 (57.35%), Query Frame = 2
Query:    8 VALKKVR--FDNLEPESVKFMAREILILRRLDHPNVIKLEGLV---TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPS 595
            VA+KK+   F++L   +   + REI +LR L HP++++++ ++   + R    +Y+VF  M+ DL  ++ + +   T+   + +++Q+L  L++ H   V HRD+K  N+L + +  LKI DFGLA  +F D       T  V T WYR PEL     + Y   +D WS GCI AE+L GKP+ PG+  V QL  +  L G+PS
Sbjct:   39 VAIKKIHNIFEHLSDAAR--ILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIKAND-DLTKEHHQFFLYQMLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFFSKYSPAIDTWSIGCIFAEILTGKPLFPGKNVVHQLDLMTDLLGTPS 239          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MAPK_FUSSO (Mitogen-activated protein kinase OS=Fusarium solani subsp. pisi GN=MAPK PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.389e-26
Identity = 67/183 (36.61%), Postives = 108/183 (59.02%), Query Frame = 2
Query:   68 REILILRRLDHPNVIKLEGLVTSRMSCS---LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLA--SFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            RE+ +LR  +H N+I +  +   R   S   +YL+   ME D+   + + ++  ++   + +++Q L  L+  H+  VLHRD+K SNLL++ +  LK+ DFGLA  +    ++   MT  V T WYR PE++L   +Y   +D+WS GCILAE+L+GKP+ PG+    QL  I  + G+P+ E
Sbjct:   68 REMKLLRYFNHENIISILDIQKPRNYESFNEVYLIQELMETDMHRAIRTQDL--SDDHCQYFIYQTLRALKAMHSANVLHRDLKPSNLLLNANCDLKVCDFGLARSAASQEDNSGFMTEYVATRWYRAPEIMLTFKEYTKAIDVWSVGCILAEMLSGKPLFPGKDYHHQLTLILDVLGTPTME 248          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MSK2_MEDSA6.288e-2736.89Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
MPK17_ARATH6.288e-2736.76Mitogen-activated protein kinase 17 OS=Arabidopsis... [more]
KSG8_ARATH6.288e-2736.71Shaggy-related protein kinase theta OS=Arabidopsis... [more]
MSK1_MEDSA8.212e-2736.41Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
KKQ1_YEAST8.212e-2734.95Probable serine/threonine-protein kinase YKL161C O... [more]
JNK1_ANCCA8.212e-2733.33Stress-activated protein kinase JNK-1 OS=Ancylosto... [more]
GSK3_DICDI1.073e-2634.78Glycogen synthase kinase-3 OS=Dictyostelium discoi... [more]
PIT1_SCHPO1.401e-2635.75Sporulation protein kinase pit1 OS=Schizosaccharom... [more]
MPK7_ORYSJ1.829e-2636.27Mitogen-activated protein kinase 7 OS=Oryza sativa... [more]
MAPK_FUSSO2.389e-2636.61Mitogen-activated protein kinase OS=Fusarium solan... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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