DC900398

Overview
NameDC900398
Unique NameDC900398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4027 contig Csv1_Contig4027:505..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CSK2A_THEPA (Casein kinase II subunit alpha OS=Theileria parva GN=TP04_0659 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.506e-25
Identity = 68/188 (36.17%), Postives = 111/188 (59.04%), Query Frame = 2
Query:   38 LEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGS 589
            L+P   K + REI IL+ L   PN+IKL  +V    S +  L+F ++ + D   L  +  ++     +K Y++QLL  + +CH+ G++HRDIK  N++ID +  +L++ D+GLA F+ P  ++ +  RV T +Y+ PELL+    Y   +D+WS GC+LA ++  K P   G    +QL KI K+ G+
Sbjct:   86 LKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPTLSIQ----DIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSV--RVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGT 267          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CSK2A_THEAN (Casein kinase II subunit alpha OS=Theileria annulata GN=TA10630 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.506e-25
Identity = 69/188 (36.70%), Postives = 110/188 (58.51%), Query Frame = 2
Query:   38 LEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLID-DDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGS 589
            L+P   K + REI IL+ L   PN+IKL  +V    S +  L+F ++ + D   L  +     T   +K Y++QLL  + +CH+ G++HRDIK  N++ID +  +L++ D+GLA F+ P  ++ +  RV T +Y+ PELL+    Y   +D+WS GC+LA ++  K P   G    +QL KI K+ G+
Sbjct:   86 LKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPQSRTPSLIFEHVNNTDFKTLYPT----LTIQDIKYYIYQLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSV--RVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGT 267          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDC7_SCHPO (Cell division control protein 7 OS=Schizosaccharomyces pombe GN=cdc7 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.236e-24
Identity = 66/176 (37.50%), Postives = 99/176 (56.25%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPEL--LLGATDYGVGVDLWSAGCILAELLAGKP 529
            VA+KKV+   +    +  +  EI +L+ LDHPN++K  G  + + + SL ++  Y E+     +     K  E  V  Y  Q+L GL + HN GV+HRDIKG+N+L   DG +K+ADFG+A+  +    H   S V + ++  PE+  L+GAT      D+WS GC + ELL G P
Sbjct:   35 VAVKKVKLSKMLKSDLSVIKMEIDLLKNLDHPNIVKYRG--SYQTNDSLCIILEYCENGSLRSICKNFGKIPENLVALYTFQVLQGLLYLHNQGVIHRDIKGANILTTKDGTIKLADFGVATKINALEDH---SVVGSPYWMAPEVIELVGAT---TASDIWSVGCTVIELLDGNP 202          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: JNK1_CAEEL (Stress-activated protein kinase jnk-1 OS=Caenorhabditis elegans GN=jnk-1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 2.921e-24
Identity = 65/199 (32.66%), Postives = 107/199 (53.77%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCS----LYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 592
            VA+KK+          K   RE+ ++  ++H N+I +    T +        LY+V   M+ +L  ++   ++     ++   ++Q+L G+ H H+ G++HRD+K SN+++  D  LKI DFGLA          MT  VVT +YR PE++LG   Y   VD+WS GCI  EL+ G+ + PG   ++Q  +I +  G+P
Sbjct:  145 VAIKKLSRPFQNVTHAKRAYRELKLMSLVNHKNIIGILNCFTPQKKLDEFNDLYIVMELMDANLCQVI---QMDLDHERLSYLLYQMLCGIRHLHSAGIIHRDLKPSNIVVRSDCTLKILDFGLAR--TAIEAFMMTPYVVTRYYRAPEVILG-MGYKENVDVWSIGCIFGELIRGRVLFPGGDHIDQWTRIIEQLGTP 337          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MK14C_DROME (Putative mitogen-activated protein kinase 14C OS=Drosophila melanogaster GN=p38c PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.815e-24
Identity = 63/202 (31.19%), Postives = 107/202 (52.97%), Query Frame = 2
Query:   11 ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLV-----TSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601
            A+K++       E  K   REI +L+ ++H NVI L  +             +YLV H M+ DL     S   + ++ +++  ++Q+L GL++ H+ GV+HRD+K  N+ ++ +  ++I DFGL+          MT  V T+WY  PE++     Y   +D+WS GCILAEL+  + +  G   V Q+  +  + G+P+ E
Sbjct:   47 AMKRLMRPFEREEDAKGTYREIRLLKHMNHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSK--RMSDQEIRIILYQILRGLKYIHSAGVVHRDLKPCNIAVNGNSEVRILDFGLSRMCADK----MTDHVGTMWYLAPEIIFLRGQYTKAIDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTRE 242          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CSK2A_MAIZE (Casein kinase II subunit alpha OS=Zea mays GN=ACK2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.815e-24
Identity = 65/188 (34.57%), Postives = 112/188 (59.57%), Query Frame = 2
Query:   38 LEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGS 589
            L+P   K + REI IL+ L   PN++KL  +V  + S +  L+F Y+ + D   L  +     T+  ++ Y+++LL  L++CH+ G++HRD+K  N++ID +   L++ D+GLA F+ P  ++ +  RV + +++ PELL+   DY   +D+WS GC+ A ++  K P   G    +QL KI K+ G+
Sbjct:   65 LKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MDE3_SCHPO (Sporulation protein kinase mde3 OS=Schizosaccharomyces pombe GN=mde3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.507e-24
Identity = 73/207 (35.27%), Postives = 116/207 (56.04%), Query Frame = 2
Query:    8 VALKKVRFDNL-EPESVKFMAREILILRRLD-HPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVK-FTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLL--------IDDDGVLKIADFGLASFFDPN-HKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 592
            VA+KK++  +  +P+      RE L LR++  HP +I L          +++LV  +M+ +L  L    + + FT+      + Q++SG+EH H +G +HRDIK  N+L        I     +K+ DFGLA    P+    P+T  V T WYR PELLL +  Y   VDL++ GCI+ E+ + KP+ PGR E +QL+++ ++ G+P
Sbjct:   50 VAVKKLKNSSKPKPKHELLKLRESLALRKISKHPCLIDLLETFMDPYR-NIFLVMEFMDCNLFQLFKRRQGRLFTKETAFNILLQIISGIEHIHKHGFMHRDIKPENILVKRISPKPISSRYSIKLGDFGLAR---PSVSSDPLTEYVSTRWYRAPELLLRSGSYNHSVDLYAFGCIVFEIYSLKPLFPGRNETDQLNRVCEILGNP 252          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CSK22_ARATH (Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.450e-23
Identity = 65/188 (34.57%), Postives = 110/188 (58.51%), Query Frame = 2
Query:   38 LEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGS 589
            L+P   K + REI IL+ L   PN++KL  +V  + S +  L+F Y+   D   L  +     T+  ++ Y+++LL  L+ CH+ G++HRD+K  N++ID +   L++ D+GLA F+ P  ++ +  RV + +++ PELL+   DY   +D+WS GC+ A ++  K P   G    +QL KI K+ G+
Sbjct:   65 LKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPT----LTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT 246          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CSK21_ARATH (Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.450e-23
Identity = 65/188 (34.57%), Postives = 110/188 (58.51%), Query Frame = 2
Query:   38 LEPESVKFMAREILILRRL-DHPNVIKLEGLVTSRMSCSLYLVFHYMEH-DLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDD-GVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGK-PIMPGRTEVEQLHKIYKLCGS 589
            L+P   K + REI IL+ L   PN++KL  +V  + S +  L+F Y+   D   L  +     T+  ++ Y+++LL  L+ CH+ G++HRD+K  N++ID +   L++ D+GLA F+ P  ++ +  RV + +++ PELL+   DY   +D+WS GC+ A ++  K P   G    +QL KI K+ G+
Sbjct:   65 LKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPT----LTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT 246          
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: MRKA_DICDI (Probable serine/threonine-protein kinase MARK-A OS=Dictyostelium discoideum GN=mrkA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.473e-23
Identity = 68/190 (35.79%), Postives = 107/190 (56.32%), Query Frame = 2
Query:    8 VALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKL-EGLVTSRMSCSLYLVFHYM-EHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKI 571
            VA+K +    L+PE++K + RE+ I++ L HPN+I+L E + TSR   +LYL+  Y  E ++   + +  V  TE Q + +  Q++S + +CH+   +HRD+K  NLL+D +  +KI DFGL++ F P     + +   +  Y  PEL+L     G  VD+WS G +L  L+ G     G   VE   KI
Sbjct:  136 VAIKIINKGKLDPETLKMVQREVRIMKLLHHPNIIRLYEVIETSR---ALYLIMEYAGEGEVMDFMIAHGV-LTESQARTFFTQIVSAINYCHSKRAVHRDLKPENLLLDCNRQIKIIDFGLSNVFTPGSY--LKTFCGSPTYASPELILRKEYNGPSVDVWSMGVVLFVLVTGYLPFDGDNYVELFQKI 319          
The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK2A_THEPA4.506e-2536.17Casein kinase II subunit alpha OS=Theileria parva ... [more]
CSK2A_THEAN4.506e-2536.70Casein kinase II subunit alpha OS=Theileria annula... [more]
CDC7_SCHPO2.236e-2437.50Cell division control protein 7 OS=Schizosaccharom... [more]
JNK1_CAEEL2.921e-2432.66Stress-activated protein kinase jnk-1 OS=Caenorhab... [more]
MK14C_DROME3.815e-2431.19Putative mitogen-activated protein kinase 14C OS=D... [more]
CSK2A_MAIZE3.815e-2434.57Casein kinase II subunit alpha OS=Zea mays GN=ACK2... [more]
MDE3_SCHPO6.507e-2435.27Sporulation protein kinase mde3 OS=Schizosaccharom... [more]
CSK22_ARATH1.450e-2334.57Casein kinase II subunit alpha-2 OS=Arabidopsis th... [more]
CSK21_ARATH1.450e-2334.57Casein kinase II subunit alpha-1 OS=Arabidopsis th... [more]
MRKA_DICDI2.473e-2335.79Probable serine/threonine-protein kinase MARK-A OS... [more]

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Properties
Property NameValue
Genbank descriptionDC900398 VSS Citrus sinensis cDNA clone VS28972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bp
CAAAATCGTAGCACTAAAGAAAGTACGGTTTGACAATTTGGAACCTGAGA
GTGTGAAATTTATGGCTAGAGAGATTCTCATATTGCGGAGATTGGATCAT
CCAAATGTTATAAAGTTGGAAGGTTTAGTGACGTCAAGGATGTCATGTAG
TTTGTACCTGGTATTTCATTATATGGAGCATGATTTGGCTGGACTTGTTG
CAAGCCCTGAAGTGAAGTTCACAGAACCACAGGTTAAATGTTACATGCAT
CAACTGCTATCTGGACTTGAGCACTGTCACAACAATGGTGTGCTTCACCG
GGACATTAAAGGCTCTAATCTTCTAATTGATGATGATGGAGTGCTTAAAA
TAGCTGATTTTGGTTTGGCATCTTTCTTTGATCCAAATCATAAGCATCCT
ATGACTAGTCGAGTGGTTACTCTTTGGTATCGACCTCCTGAGCTGCTTCT
GGGGGCTACTGATTACGGTGTGGGTGTTGATCTATGGAGCGCAGGTTGTA
TTTTAGCTGAGCTACTGGCTGGGAAGCCCATTATGCCTGGTCGTACGGAG
GTAGAGCAACTACATAAGATATATAAGTTATGTGGTTCCCCTTCAGAAGA
AT
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