DC900364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 1.097e-27 Identity = 80/216 (37.04%), Postives = 119/216 (55.09%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFR-----MEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHRAALEYQQAAMEAKPAEEHHHQVLD---HFPFLGDQQPS 677 MGRGKI IKRIEN T RQVTFSKRRAG+LKK E+ VLCDA++G++IFSS GKL YCT + +I+E+ +G +I + + + E+ ++KE +Q+ +R GEDL S+ +L +E L + +RD+ + + +R E+MLE+E+ + + H+ +E E + +HH D PF QPS Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSG-KILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMH----KRNEKMLEDEHKMLA--FRVHQQEVELSGGIRELELG--YHHDDRDFAASMPFTFRVQPS 207
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.097e-27 Identity = 68/168 (40.48%), Postives = 105/168 (62.50%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEH---DSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 MGRG++ +KRIEN RQVTFSKRR GLLKK +ELSVLCDA++ LIIFSS GKL ++ + +E IER + + + ++ + E+ L+ + L + R GEDLG + +L LE +LE+++ R RK +++ +++++LR+KER L + N + Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS--VGIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQL 166
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.433e-27 Identity = 70/166 (42.17%), Postives = 102/166 (61.45%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHD----SREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEEN 539 MGRG++ +KRIEN RQVTF+KRR GLLKK +ELSVLCDA++ LI+FS+ GKL ++C+ M + +ER K + I ++ E + E L+ LQ R GEDLG + +L+QLE +L+ S+ +VR K + + QL +L+ KE +L + N Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTS-NMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDAN 165
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.433e-27 Identity = 67/168 (39.88%), Postives = 109/168 (64.88%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKV--TGTRIPEHDSREQIF-NELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 MGRGKIAIKRI+N RQVTFSKRR GL+KK EL++LCDA +GLI+FS TG+L + + M+ IIER + R+ S + + E+ LR++ + L + R+ GE++ + DL L++++E S++ +R++K++LL +++ L K ++++ENS + Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS--SMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSEL 166
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.433e-27 Identity = 64/154 (41.56%), Postives = 100/154 (64.94%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRK 515 MGRGKI IKRIEN T RQVT+SKRR G++KK EL+VLCDAQ+ +I+FSSTGK ++C+ ++ I +R + GT + + E + L+ L+ R L+ +R+ GEDL + +D+L LE +++++ +VR RK ++ Q + ++K Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSL-WIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKK 153
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.872e-27 Identity = 70/175 (40.00%), Postives = 110/175 (62.86%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQ---IFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEH 569 MGRGK+ +KRIEN TRQVTFSKR++GLLKK +ELSVLCDA++ LIIFS+ GKL ++ + + IER + + ++D+ E + E+ L+ + L + R GEDL + +L LE +LE +++ R +K +++ +Q++ LRRKER L + N+ + ++H Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSN--VGVGRTIERYYRCKDNLL-DNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDH 172
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.445e-27 Identity = 75/202 (37.13%), Postives = 111/202 (54.95%), Query Frame = 3 Query: 48 RIMGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKV----TGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQE-HRAALEYQQAAMEAKPAEEHHHQV 638 R +GRGKI IKRIEN T RQVTF KRR GLLKK +ELSVLCDA++ L++FS+ G+L +Y ++ IER K + T + + E + LR + L R GE L + +L LE +E ++K+R +KNELL +++ ++++E L N + I E RA ++QQ + + +H V Sbjct: 15 RKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANN--SVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLMPGSSSNYHELV 214
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.193e-27 Identity = 65/165 (39.39%), Postives = 102/165 (61.82%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVTGTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 M RGKI IKRIEN T RQVT+SKRR GL KK HELSVLCDA++ +I+ SST KL +Y + +Q+ ++ K G + E++ L L + R L+ +R+ GE L + Y+ + L ++++S+ +R+RK +++ Q+D ++K R +EE + N+ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDL-WSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEEIHRNL 164
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 7.113e-27 Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIERRLKVT----GTRIPEHDSREQIFNELAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNM 548 M RGK +KRIENPT+RQVTFSKRR GLLKK ELSVLCDA++ LI+FS GKL ++ + ++ IER T G + + D EQ+ + L K+ L+ R+ GE L ++L LE +LE S+ +R RK +LL++Q+ LR KE L ++N + Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA--STQKTIERYRTYTKENIGNKTVQQDI-EQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEEL 166
BLAST of DC900364 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 7.113e-27 Identity = 74/176 (42.05%), Postives = 107/176 (60.80%), Query Frame = 3 Query: 54 MGRGKIAIKRIENPTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKLCQYCTEPFRMEQIIER-RLKVTGTRI-PEHDSREQIFNE-LAVLRKETRRLQLSMRRYTGEDLGSIPYDDLDQLEHELESSVNKVRDRKNELLQQQLDNLRRKERMLEEENSNMYRWIQEHR 572 M RGK+ ++RIENP RQVTF KRR GLLKK ELSVLCDA +G+IIFSS GKL + T M ++ER + V G ++ P R+Q+ + + +LR+E LQ +R G G + D L LE LE + ++R K +++QQ++ LR KE +L+E N + ++E + Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNG-NMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKEQQ 175 The following BLAST results are available for this feature:
BLAST of DC900364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900364 ID=DC900364; Name=DC900364; organism=Citrus sinensis; type=EST; length=1050bpback to top |