DC900363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900363 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.097e-20 Identity = 65/207 (31.40%), Postives = 94/207 (45.41%), Query Frame = 1 Query: 319 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGV 936 F+ QSF+ A Y GF T D +EI AF AHV +T +CY +E++ + YCD S K +PC PG +YYGRG + I WN+NYG G+ + D L P+ + Q+ T++F+ A+W WM N+ FG T+ + G C + A+N V++Y Y GV Sbjct: 109 FYTRQSFLNAARSYS--GFANDRTNDDSKREIAAFFAHVTHETG-------------HMCYINEINGANMDYCDKSNKQ-WPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM----------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGV 277
BLAST of DC900363 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 9.286e-20 Identity = 71/220 (32.27%), Postives = 98/220 (44.55%), Query Frame = 1 Query: 319 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSC 975 F+ SFI A + F + T+ +EI AH +T CY E++ S+ YCD++ + YPC PG Y+GRG I + WNYNYGA G++L +LL PE + N T+AF +W WM V +P N FG T+ + G C G+ A+N + +Y Y LGV GPN LSC Sbjct: 97 FYTRDSFINAANTFP--NFANSVTR----REIATMFAHFTHETG-------------HFCYIEEINGASRDYCDENNRQ-YPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSV---------------RPVLNQ-------GFGATIRAINGME-CNGGNSGAVNARIRYYRDYCGQLGV---DPGPN--LSC 268
BLAST of DC900363 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.529e-19 Identity = 60/203 (29.56%), Postives = 84/203 (41.38%), Query Frame = 1 Query: 373 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSC 975 FG G+ D +EI AF AH+ +T+ LC+ E +YCD YPC G +YYGRG + + WNYNY G+A+ D L +PE + + +F+AA+W WMT V S FG T + G C + D N+ + Y Y GV P + L+C Sbjct: 126 FGNEGSSDDNKREIAAFFAHISHETT-------------NLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVH----------------------SVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGV-----APGDNLTC 288
BLAST of DC900363 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.483e-17 Identity = 67/220 (30.45%), Postives = 96/220 (43.64%), Query Frame = 1 Query: 319 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSP-SQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSC 975 F+ +F+ A Y GFGT T D+ +EI A+ AHV +T LCY E + +YC +S +Y PC P EY+GRG + + WNYNY G+ L D LN P+ + ++ ++F+ ++W W+ K Q D G FG T+ I+ G C + M V +Y Y LGV P L C Sbjct: 71 FYTRSNFLEAVSAYP--GFGTKCTDEDRKREIAAYFAHVTHETG-------------HLCYIEERDGHANNYCQESQQY--PCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIR--KGVQYVILDPNQG----------------FGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGV-----SPGNNLPC 250
BLAST of DC900363 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.141e-16 Identity = 59/207 (28.50%), Postives = 87/207 (42.03%), Query Frame = 1 Query: 319 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGV 936 F+ +F++A Y FG G++ D +EI A AH +T CY E+ S+ YCD+ YPC+ Y+GRG I + WN+NYG G A D L PE + + ++F+ A+W WM V +P N FG T+ + G C + + V++Y Y LGV Sbjct: 93 FYTRDAFLSALNSYTD--FGRVGSEDDSKREIAAAFAHFTHETG-------------HFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHV---------------RPVINQ-------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGV 262 The following BLAST results are available for this feature:
BLAST of DC900363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900363 ID=DC900363; Name=DC900363; organism=Citrus sinensis; type=EST; length=1374bpback to top |